| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238023917
Identifier: 238023917
GI number: 238023917
Start: 554911
End: 555438
Strand: Reverse
Name: 238023917
Synonym: bglu_2g04590
Alternate gene names: NA
Gene position: 555438-554911 (Counterclockwise)
Preceding gene: 238023918
Following gene: 238023915
Centisome position: 19.65
GC content: 69.89
Gene sequence:
>528_bases TTGAAAGCGACTCTAGTACGATGCGCGGCCGCATGCTTGGCCGCCGGCGCGGCAAGCCTCGCGCACGCCCAGACGCCGGC GCCCGAACCCGCTGCCCCCGCTGCCCCCGCCGCACCGGCGCTCTCGCTGGCGCCCGTCAACGCCGGCGCCTCGGCCGACG AACTGCTGCGCGATGCCGACTATGCGCTGCGCCTGCTCGACACGGGCCGCTATCAGGACCTGTGGAACGACGCGGCGCCC TTCGTCAAGCAGCGCTACAATCCGCAGCGCTTCGCGAACGACACGCGGCTGTCGCGCGAGGCCGTGGGCGCGATCAAGAG CCGTGGCTGGGCCGCCGTCACGCGGATCATCTACAGCGGCGCGAAGGATGTGCCGGACGGCCTCTACGCGAACGTCGACT ACGCAACCACGCAGGCCTCGGGCAAGGTCGTCTATGAAAAAATCAGCTTCCGGCTCGAAAACGACGGCCGCTGGCATCTG ACGGGCTACCTGCCGCGCGTCGCGCAGGGCCCGATTCCGGGCAGTTGA
Upstream 100 bases:
>100_bases CGACAACGTGGCGGCCTACACCGAAGCGCTCGCCGCCGTCTATCGCTGACGCGCGGCCTTGCCACCCCTTTCACGCCTTT CGAACCAGCCAGGAGGCCTC
Downstream 100 bases:
>100_bases CGGCGCGCGCGGCGGCCGGTGCGGCACCGCACCGGCGCCGCCGCCGGCTCAGGCCTGGGCAGCGCTCAGGTTGCGCTCGC AGTCTTCCCAGTAGCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKATLVRCAAACLAAGAASLAHAQTPAPEPAAPAAPAAPALSLAPVNAGASADELLRDADYALRLLDTGRYQDLWNDAAP FVKQRYNPQRFANDTRLSREAVGAIKSRGWAAVTRIIYSGAKDVPDGLYANVDYATTQASGKVVYEKISFRLENDGRWHL TGYLPRVAQGPIPGS
Sequences:
>Translated_175_residues MKATLVRCAAACLAAGAASLAHAQTPAPEPAAPAAPAAPALSLAPVNAGASADELLRDADYALRLLDTGRYQDLWNDAAP FVKQRYNPQRFANDTRLSREAVGAIKSRGWAAVTRIIYSGAKDVPDGLYANVDYATTQASGKVVYEKISFRLENDGRWHL TGYLPRVAQGPIPGS >Mature_175_residues MKATLVRCAAACLAAGAASLAHAQTPAPEPAAPAAPAAPALSLAPVNAGASADELLRDADYALRLLDTGRYQDLWNDAAP FVKQRYNPQRFANDTRLSREAVGAIKSRGWAAVTRIIYSGAKDVPDGLYANVDYATTQASGKVVYEKISFRLENDGRWHL TGYLPRVAQGPIPGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18566; Mature: 18566
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATLVRCAAACLAAGAASLAHAQTPAPEPAAPAAPAAPALSLAPVNAGASADELLRDAD CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH YALRLLDTGRYQDLWNDAAPFVKQRYNPQRFANDTRLSREAVGAIKSRGWAAVTRIIYSG HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHCC AKDVPDGLYANVDYATTQASGKVVYEKISFRLENDGRWHLTGYLPRVAQGPIPGS CCCCCCCCEECCCHHCCCCCCCEEEEEEEEEECCCCCEEEEECCCHHHCCCCCCC >Mature Secondary Structure MKATLVRCAAACLAAGAASLAHAQTPAPEPAAPAAPAAPALSLAPVNAGASADELLRDAD CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH YALRLLDTGRYQDLWNDAAPFVKQRYNPQRFANDTRLSREAVGAIKSRGWAAVTRIIYSG HHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHCC AKDVPDGLYANVDYATTQASGKVVYEKISFRLENDGRWHLTGYLPRVAQGPIPGS CCCCCCCCEECCCHHCCCCCCCEEEEEEEEEECCCCCEEEEECCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA