| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is yajO [H]
Identifier: 238023915
GI number: 238023915
Start: 552418
End: 553464
Strand: Reverse
Name: yajO [H]
Synonym: bglu_2g04570
Alternate gene names: 238023915
Gene position: 553464-552418 (Counterclockwise)
Preceding gene: 238023917
Following gene: 238023911
Centisome position: 19.58
GC content: 68.0
Gene sequence:
>1047_bases ATGCGTTACAACCAGCTTGGCAACACCGGACTCTTCGTGTCCGAGATCTGTCTGGGCACCATGACCTTCGGCCACACGGA ACAGGCCGGAATCTGGGGCGACATCGCGGGCGTGGACCAGACGACGGCCGACACGATCGTGCGGCGCAGCCTGGCGGCCG GCGTCAACTTCATCGATACGGCCAACGTCTATTCGTTCGGCGCATCGGAGCGGATGCTTGGCCAGTCGCTGAAAAACCTG GCGGTGCCGCGCCAGGAGGTGGTGCTCGCCACCAAGGTGTTCGCGCCGATGGGCAGCGGCCCGAACGATCGCGGTTCGTC GCGCGGCCACATCCTGGCGTCGGTGGAGGCCAGCCTGCAACGCCTGCAGACCGATTACATCGATCTTTACCAGGTCCACG CGAACGACCCGGTCACGCCGATCGACGAGACGCTGCGCGCGCTCGACGATCTGGTTTCGCGCGGCCTGGTGCGCTATATC GGCGTGTCGAACTGGCAGGCCTGGCGCATCGCCAAGGCGCTCGGCATCGCCGAACGGCGCGGCTTCGCGCGTTTCGAAAC GGTGCAGGCCTATTACTCGATCGCGGGCCGCGACCTCGAACGCGAGCTGGTGCCGATGATGCAGGAGGAAAAGGTCGGGC TGATGGTGTGGTCGCCGCTCGCGGGCGGCCTGCTGTCGGGCAAGTACGGCCCCGGCTCGACCGAGGCGGGCGGGCGCCGC ACCAGCTTCGATTTCCCGCCCGTCGACAAGGATCGCGCCTGGGCCTGCGTGGCGGCGATGCGGCCGATCGCGCAGAAGCA CGGCACGAGCGTGGCCGCGATCGCGCTCGCCTACGTGCTCGCCAAGCCGTTCGTGACGACGGTGATCATCGGCGGCAAGC GCCTCGAGCAGATCGAGCAGAACCTGGGCGCGGTCGGCCTGAAGCTCGATGCCGACGATCTCGAGACGCTCGATGCCGTC AGCGCGCTGGCGCCGGAGTACCCGGGCTGGATGCTGAGCCGGCAATCGGCCGGCCGCGTACCGCAGCCGTTCGAGCCGAA GGCCTAG
Upstream 100 bases:
>100_bases TAATAGTCCATTCAAACCAGCGCCCTTTATCGCGCGGCGCCGAAAGCGCATAGTACGCGATTCCTGGCCGGCGCCGCCGG CCCGTCGATGGAGATATCAG
Downstream 100 bases:
>100_bases CAAGCCGCGCGCCGCCGGCCCGGCGCGCTCGCCCCGCCCCAGCACCAGCACCAGCACCAGCCGCGCCGGTTCGTGGCCCA AGCCCATCGAACATGCCGTG
Product: putative aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MRYNQLGNTGLFVSEICLGTMTFGHTEQAGIWGDIAGVDQTTADTIVRRSLAAGVNFIDTANVYSFGASERMLGQSLKNL AVPRQEVVLATKVFAPMGSGPNDRGSSRGHILASVEASLQRLQTDYIDLYQVHANDPVTPIDETLRALDDLVSRGLVRYI GVSNWQAWRIAKALGIAERRGFARFETVQAYYSIAGRDLERELVPMMQEEKVGLMVWSPLAGGLLSGKYGPGSTEAGGRR TSFDFPPVDKDRAWACVAAMRPIAQKHGTSVAAIALAYVLAKPFVTTVIIGGKRLEQIEQNLGAVGLKLDADDLETLDAV SALAPEYPGWMLSRQSAGRVPQPFEPKA
Sequences:
>Translated_348_residues MRYNQLGNTGLFVSEICLGTMTFGHTEQAGIWGDIAGVDQTTADTIVRRSLAAGVNFIDTANVYSFGASERMLGQSLKNL AVPRQEVVLATKVFAPMGSGPNDRGSSRGHILASVEASLQRLQTDYIDLYQVHANDPVTPIDETLRALDDLVSRGLVRYI GVSNWQAWRIAKALGIAERRGFARFETVQAYYSIAGRDLERELVPMMQEEKVGLMVWSPLAGGLLSGKYGPGSTEAGGRR TSFDFPPVDKDRAWACVAAMRPIAQKHGTSVAAIALAYVLAKPFVTTVIIGGKRLEQIEQNLGAVGLKLDADDLETLDAV SALAPEYPGWMLSRQSAGRVPQPFEPKA >Mature_348_residues MRYNQLGNTGLFVSEICLGTMTFGHTEQAGIWGDIAGVDQTTADTIVRRSLAAGVNFIDTANVYSFGASERMLGQSLKNL AVPRQEVVLATKVFAPMGSGPNDRGSSRGHILASVEASLQRLQTDYIDLYQVHANDPVTPIDETLRALDDLVSRGLVRYI GVSNWQAWRIAKALGIAERRGFARFETVQAYYSIAGRDLERELVPMMQEEKVGLMVWSPLAGGLLSGKYGPGSTEAGGRR TSFDFPPVDKDRAWACVAAMRPIAQKHGTSVAAIALAYVLAKPFVTTVIIGGKRLEQIEQNLGAVGLKLDADDLETLDAV SALAPEYPGWMLSRQSAGRVPQPFEPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=332, Percent_Identity=31.9277108433735, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI27436969, Length=335, Percent_Identity=30.7462686567164, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI4504825, Length=333, Percent_Identity=30.6306306306306, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI27436962, Length=332, Percent_Identity=31.9277108433735, Blast_Score=158, Evalue=6e-39, Organism=Homo sapiens, GI27436966, Length=332, Percent_Identity=31.6265060240964, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI27436971, Length=313, Percent_Identity=32.9073482428115, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI223718702, Length=295, Percent_Identity=29.4915254237288, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI41152114, Length=294, Percent_Identity=30.6122448979592, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI41327764, Length=281, Percent_Identity=30.9608540925267, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI223718708, Length=147, Percent_Identity=32.6530612244898, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI87081735, Length=319, Percent_Identity=37.6175548589342, Blast_Score=215, Evalue=4e-57, Organism=Escherichia coli, GI1789199, Length=351, Percent_Identity=33.3333333333333, Blast_Score=164, Evalue=8e-42, Organism=Escherichia coli, GI1788070, Length=327, Percent_Identity=32.4159021406728, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1789375, Length=329, Percent_Identity=29.1793313069909, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1788081, Length=272, Percent_Identity=28.3088235294118, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1786400, Length=293, Percent_Identity=27.9863481228669, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI87082198, Length=297, Percent_Identity=27.6094276094276, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI48994888, Length=271, Percent_Identity=27.3062730627306, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787674, Length=290, Percent_Identity=24.1379310344828, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI212645785, Length=311, Percent_Identity=26.3665594855305, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17550248, Length=145, Percent_Identity=30.3448275862069, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6325169, Length=333, Percent_Identity=31.2312312312312, Blast_Score=166, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6323998, Length=329, Percent_Identity=30.3951367781155, Blast_Score=143, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6319958, Length=287, Percent_Identity=32.404181184669, Blast_Score=142, Evalue=7e-35, Organism=Saccharomyces cerevisiae, GI6319951, Length=331, Percent_Identity=29.0030211480363, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6322615, Length=255, Percent_Identity=30.9803921568627, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6321052, Length=156, Percent_Identity=32.0512820512821, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24640980, Length=335, Percent_Identity=27.7611940298507, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI45549126, Length=335, Percent_Identity=27.7611940298507, Blast_Score=111, Evalue=6e-25, Organism=Drosophila melanogaster, GI24646159, Length=324, Percent_Identity=31.7901234567901, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI24646155, Length=324, Percent_Identity=29.6296296296296, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24644950, Length=328, Percent_Identity=24.6951219512195, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37685; Mature: 37685
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYNQLGNTGLFVSEICLGTMTFGHTEQAGIWGDIAGVDQTTADTIVRRSLAAGVNFIDT CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEC ANVYSFGASERMLGQSLKNLAVPRQEVVLATKVFAPMGSGPNDRGSSRGHILASVEASLQ CCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHH RLQTDYIDLYQVHANDPVTPIDETLRALDDLVSRGLVRYIGVSNWQAWRIAKALGIAERR HHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC GFARFETVQAYYSIAGRDLERELVPMMQEEKVGLMVWSPLAGGLLSGKYGPGSTEAGGRR CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCHHCCHHCCCCCCCCCCCCCCC TSFDFPPVDKDRAWACVAAMRPIAQKHGTSVAAIALAYVLAKPFVTTVIIGGKRLEQIEQ CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHHH NLGAVGLKLDADDLETLDAVSALAPEYPGWMLSRQSAGRVPQPFEPKA HHCCEEEEECHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MRYNQLGNTGLFVSEICLGTMTFGHTEQAGIWGDIAGVDQTTADTIVRRSLAAGVNFIDT CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEC ANVYSFGASERMLGQSLKNLAVPRQEVVLATKVFAPMGSGPNDRGSSRGHILASVEASLQ CCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHH RLQTDYIDLYQVHANDPVTPIDETLRALDDLVSRGLVRYIGVSNWQAWRIAKALGIAERR HHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC GFARFETVQAYYSIAGRDLERELVPMMQEEKVGLMVWSPLAGGLLSGKYGPGSTEAGGRR CCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCHHCCHHCCCCCCCCCCCCCCC TSFDFPPVDKDRAWACVAAMRPIAQKHGTSVAAIALAYVLAKPFVTTVIIGGKRLEQIEQ CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHHH NLGAVGLKLDADDLETLDAVSALAPEYPGWMLSRQSAGRVPQPFEPKA HHCCEEEEECHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]