| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is galM [H]
Identifier: 238023902
GI number: 238023902
Start: 534200
End: 535282
Strand: Reverse
Name: galM [H]
Synonym: bglu_2g04420
Alternate gene names: 238023902
Gene position: 535282-534200 (Counterclockwise)
Preceding gene: 238023903
Following gene: 238023901
Centisome position: 18.93
GC content: 68.14
Gene sequence:
>1083_bases GTGTCGACCGAAAACCCGAACGCCGCGCAACGCGTGACCGCCAGCGACAGCAGTTCACTGAGCGACGGCAGGACCGTGCA GACTTTCGTGCTGCGCAATGCGAAGGGCGCCAGCGTGCGAATCAGCGAACTGGGCGGGACGCTCTTGTCGTGGATCGCGC CCGACCGGCACGGCAACCCGGGGGAGATCCTGCTCGGCCACGATACGCTCGACGATTATCTGAGCTCGCGCGCGTACCTG GGGGCGCTGGTCGGGCGGTGGGCCAACCGGATCGAGTCGGCGCGCTTCCGGCTGGACGGGGTGGACTACCAGTTGCCCCC GAACGAAGGCGACAACCTGCTTCACGGCGGGCAAGCCGGTTTTCACCAGCGGCTCTGGCATGCCCGGCCGGCCGGCGACT CGTTGCTGATGCGGCTCGATTCGCCGGACGGCGAAGGCGGTTTCCCGGGCCAGTTGCAAGTCGAGGTGCGCTACCGGCTG AGCGACGACGGCACGCTGGAAATCGACTATCTGGCGCAGGCCGACCGGCTGACGCCGGTGAACCTGACCAATCATGCGTA TTTCAATCTGACGGGGCAGCCGGATCGGGACGTCCGCGACCATCGGCTGACGATCCATGCCGATTCGTATTTCGCGGTCG ACGGCGCGCTGATTCCGCAGCAACGCGAGCCGGTCGAGCGCAGCCCCTTCGACTTCCGCCGCGCCGCGCCGATCGGCCCG GGGCTGGACGTCGAGCACGCCCAGATCCGGCTGGCGGGCGGCTTCGACCATTGCTACGTGCTCCACGCCGCCGGCCCCTC GGCGGGAACGCCCGCCGTGCGCGAAGTGGCGCGTCTCGAGGAGCCGGAAAGCGGACGCGTGCTGACCGTGTCGACGGATC AGCCCGGCTTGCAGTTCTACAGCGGCAACTTCCTCGAAGGCGTGGCCGCACGCGGCGGAAAGGCGTATCGCCGGCATGCC GGCTTGTGTCTCGAAACCGGCGGATTCCCGAACCAGATCAACATGGCGGACCGGGACGCGGTACTGGTGATGCCGGGACG GCCGTATCGCCAGCTCACCCGATACCAGGTCAGTGCCGGCTAG
Upstream 100 bases:
>100_bases ACCGCTCCGGGGCGGACCGGCGGACCGGCGAATCGACGCCAGCCGCGCAGCGAGCGGCCGGCGCATCGCGAATGAACGTT CAACCTGAAGGAGACGAGCC
Downstream 100 bases:
>100_bases CGGATCGCGGCAAGCGCGCGCCCGGCGGCCCGGCCCGCTGTTGCCATGCAAGCTGGCGAAATCGGGCCGTGCCGTGGCGC GCCCATCCCGTGCCGCGAAA
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSTENPNAAQRVTASDSSSLSDGRTVQTFVLRNAKGASVRISELGGTLLSWIAPDRHGNPGEILLGHDTLDDYLSSRAYL GALVGRWANRIESARFRLDGVDYQLPPNEGDNLLHGGQAGFHQRLWHARPAGDSLLMRLDSPDGEGGFPGQLQVEVRYRL SDDGTLEIDYLAQADRLTPVNLTNHAYFNLTGQPDRDVRDHRLTIHADSYFAVDGALIPQQREPVERSPFDFRRAAPIGP GLDVEHAQIRLAGGFDHCYVLHAAGPSAGTPAVREVARLEEPESGRVLTVSTDQPGLQFYSGNFLEGVAARGGKAYRRHA GLCLETGGFPNQINMADRDAVLVMPGRPYRQLTRYQVSAG
Sequences:
>Translated_360_residues MSTENPNAAQRVTASDSSSLSDGRTVQTFVLRNAKGASVRISELGGTLLSWIAPDRHGNPGEILLGHDTLDDYLSSRAYL GALVGRWANRIESARFRLDGVDYQLPPNEGDNLLHGGQAGFHQRLWHARPAGDSLLMRLDSPDGEGGFPGQLQVEVRYRL SDDGTLEIDYLAQADRLTPVNLTNHAYFNLTGQPDRDVRDHRLTIHADSYFAVDGALIPQQREPVERSPFDFRRAAPIGP GLDVEHAQIRLAGGFDHCYVLHAAGPSAGTPAVREVARLEEPESGRVLTVSTDQPGLQFYSGNFLEGVAARGGKAYRRHA GLCLETGGFPNQINMADRDAVLVMPGRPYRQLTRYQVSAG >Mature_359_residues STENPNAAQRVTASDSSSLSDGRTVQTFVLRNAKGASVRISELGGTLLSWIAPDRHGNPGEILLGHDTLDDYLSSRAYLG ALVGRWANRIESARFRLDGVDYQLPPNEGDNLLHGGQAGFHQRLWHARPAGDSLLMRLDSPDGEGGFPGQLQVEVRYRLS DDGTLEIDYLAQADRLTPVNLTNHAYFNLTGQPDRDVRDHRLTIHADSYFAVDGALIPQQREPVERSPFDFRRAAPIGPG LDVEHAQIRLAGGFDHCYVLHAAGPSAGTPAVREVARLEEPESGRVLTVSTDQPGLQFYSGNFLEGVAARGGKAYRRHAG LCLETGGFPNQINMADRDAVLVMPGRPYRQLTRYQVSAG
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=341, Percent_Identity=41.0557184750733, Blast_Score=245, Evalue=4e-65, Organism=Escherichia coli, GI1786971, Length=342, Percent_Identity=39.766081871345, Blast_Score=216, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17557428, Length=331, Percent_Identity=29.9093655589124, Blast_Score=138, Evalue=4e-33, Organism=Caenorhabditis elegans, GI115533334, Length=331, Percent_Identity=29.9093655589124, Blast_Score=138, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6319493, Length=374, Percent_Identity=29.4117647058824, Blast_Score=119, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6322004, Length=359, Percent_Identity=29.8050139275766, Blast_Score=115, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6324399, Length=343, Percent_Identity=28.2798833819242, Blast_Score=109, Evalue=6e-25, Organism=Drosophila melanogaster, GI24659048, Length=345, Percent_Identity=34.7826086956522, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24583720, Length=347, Percent_Identity=34.0057636887608, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24668278, Length=337, Percent_Identity=32.0474777448071, Blast_Score=188, Evalue=5e-48, Organism=Drosophila melanogaster, GI24668282, Length=346, Percent_Identity=32.0809248554913, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24641876, Length=350, Percent_Identity=28.5714285714286, Blast_Score=145, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR013458 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 39317; Mature: 39186
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00962 RIBOSOMAL_S2_1 ; PS00545 ALDOSE_1_EPIMERASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTENPNAAQRVTASDSSSLSDGRTVQTFVLRNAKGASVRISELGGTLLSWIAPDRHGNP CCCCCCCHHHEEECCCCCCCCCCCEEEEEEEECCCCCEEEHHHHCCHHHHHHCCCCCCCC GEILLGHDTLDDYLSSRAYLGALVGRWANRIESARFRLDGVDYQLPPNEGDNLLHGGQAG CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCCCCCCCEECCCCC FHQRLWHARPAGDSLLMRLDSPDGEGGFPGQLQVEVRYRLSDDGTLEIDYLAQADRLTPV HHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCEE NLTNHAYFNLTGQPDRDVRDHRLTIHADSYFAVDGALIPQQREPVERSPFDFRRAAPIGP EECCEEEEEECCCCCCCCCCCEEEEEECCEEEECCEECCCCCCCCCCCCCCHHHCCCCCC GLDVEHAQIRLAGGFDHCYVLHAAGPSAGTPAVREVARLEEPESGRVLTVSTDQPGLQFY CCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCEEE SGNFLEGVAARGGKAYRRHAGLCLETGGFPNQINMADRDAVLVMPGRPYRQLTRYQVSAG CCCHHHHHHHCCCHHHHHHCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHEEEECCC >Mature Secondary Structure STENPNAAQRVTASDSSSLSDGRTVQTFVLRNAKGASVRISELGGTLLSWIAPDRHGNP CCCCCCHHHEEECCCCCCCCCCCEEEEEEEECCCCCEEEHHHHCCHHHHHHCCCCCCCC GEILLGHDTLDDYLSSRAYLGALVGRWANRIESARFRLDGVDYQLPPNEGDNLLHGGQAG CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEECCCCCCCCCEECCCCC FHQRLWHARPAGDSLLMRLDSPDGEGGFPGQLQVEVRYRLSDDGTLEIDYLAQADRLTPV HHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCEE NLTNHAYFNLTGQPDRDVRDHRLTIHADSYFAVDGALIPQQREPVERSPFDFRRAAPIGP EECCEEEEEECCCCCCCCCCCEEEEEECCEEEECCEECCCCCCCCCCCCCCHHHCCCCCC GLDVEHAQIRLAGGFDHCYVLHAAGPSAGTPAVREVARLEEPESGRVLTVSTDQPGLQFY CCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCEEE SGNFLEGVAARGGKAYRRHAGLCLETGGFPNQINMADRDAVLVMPGRPYRQLTRYQVSAG CCCHHHHHHHCCCHHHHHHCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7966338; 8905232; 9278503 [H]