| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023876
Identifier: 238023876
GI number: 238023876
Start: 497577
End: 499253
Strand: Direct
Name: 238023876
Synonym: bglu_2g04150
Alternate gene names: NA
Gene position: 497577-499253 (Clockwise)
Preceding gene: 238023875
Following gene: 238023882
Centisome position: 17.6
GC content: 66.55
Gene sequence:
>1677_bases ATGGGCAACGATTCGGGTTCCTCAGCAAGCGGCGAGACGTTTCCGCTGCATCATGGCGCACACAATTCGCAGGGGGTGCC GCCGACCGTCAATCCGGTGGCGCTCGCGCGCGGCCGCGACGAGCCGTTCTTCGACCCGGTCGCCTACGGCAACGGCCCCG ACGATTCGGTCAGCGACACCACGGAGAGCGCCGCCGTCACGCATCACACCGCCGTCATCGGCGGCAAGCGGATCGCCTAC ACGGCCAGCGCCGGCCATCTCGTGACGGTGGACGCGAGCAGCTCGCAGCCGAACGCGAAGCTGTTCTACGTGGCCTTCAC GCAGGACGGGCAGAAGGAGGAGACGCGCCCCGTCACGTTCTTCTACAACGGCGGGCCGGGCTCGTCGTCGGTGTTCGTGC TGCTCGGCTCGTTCGCGCCGCGCCGGATTCGCACCTCGATGCCGAGCTTCACGCCGCCCGCCCCCTATCAGATGGAGGAC AACCCGGACAGCCTGCTCGACAAGAGCGACCTGGTGTTCGTGAATCCGGTGGGCACCGGTTACTCGGCCGCGGTGGCGCC GTTCAAGAACCGCAACTTCTGGGGCGTGGACGAGGACGCCGACTCGCTCAAGCAGTTCATCAAGCGCTACCTGACGAAGA ACAACCGCTGGAATTCGCCGAAATACCTGTACGGCGAGTCCTACGGCACGGCGCGCAGCTGCGTGCTGGCCTACAAGCTG CACGAGGACGGCGTGGACCTGAACGGCATCACGCTGCAGTCGTCGATCCTCGACTACCGGCAGGCCGGCAATCCGGTGGG CGTGCTGCCGACCGCGGCGGCCGATGCCTGGTATCACAAGCGGCTCGGCGTGATGCCCACGCCGACCGATCTCGGCGCGT TCAGCGAGGAAGTCGCGCAGTTCGCGCGCACCGACTATCTCGACGCGCTGCGCAAGTTCCCCCAGACCGACGCGGCGGTG GTGCAGAAGCTGTCCGATTACACCGGCATCGACACCACCACGCTGCTGTCGTGGAGCCTCGACGTGGCCAGCTACGACGC GCGCGGCAACTCGGTGTTCCTGACCACGCTGCTGCGCGCGCGCGGGCTCTCGCTCGGCTCGTACGACGGCCGCGTCACGG CGATCTCGAGCGGTATCGCCGGCAATATCGATCCGAACTCGGGCGGCAACGATCCGACCATGACGGCCGTGTCGGGCGTC TACACGGCGATGTGGAATTCGTATCTGAACGAGCAGCTGAAATACACCTCGAACTCGGCATTCACCGACCTCAACGACCA GGCCTTCGCGAACTGGGACTTCAAGCACACGGACCCGACCGGCAAGGAGGTGGGCCTCGACGCGAAGGGCAACGTGATCC TCTACACGGCGGGCGACCTGGCCGCCGTGATGGCGCTCAACCCCGACCTGAAGGTGCTGTCGGCCAACGGCTTCTACGAT TTCGTCACGCCGTTCTACCAGACCGTGCTCGATCTGCAGCAGATGCCGCTGGAGGACGCGAAGGTGCGCAAGAACCTGTC GGCGCGCTTCTATCCGTCGGGGCACATGGTCTATCTCGACGGCGGCTCGCGCACCGCGCTCAAGCGCGACGTCGCGGCGC TCTACGAGCGGACCGTGGCCGATACCGGCGCGGTGATGCGGATTCGCGCGCTGCAGGCGAAGAAGCGGGGCGGTTGA
Upstream 100 bases:
>100_bases CACGGGCGAGCGGTGCCGGGCGGAACCGGCGGCTGGTGGGTGGCAGGAGGTTCATGGTGGTTCGTTCAGGCAGGCAAGAC CAAATCAAAGGAGCGGTACG
Downstream 100 bases:
>100_bases GCGCGGCGCGCGAAAGCCGCAACGCCCGGCCCGGTGAACCGCACCCCGAAGCTCGGACATCGATCCCGCGTTCGGGGTGT CCGACATGGCGGGGCGGCCT
Product: carboxypeptidase C
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MGNDSGSSASGETFPLHHGAHNSQGVPPTVNPVALARGRDEPFFDPVAYGNGPDDSVSDTTESAAVTHHTAVIGGKRIAY TASAGHLVTVDASSSQPNAKLFYVAFTQDGQKEETRPVTFFYNGGPGSSSVFVLLGSFAPRRIRTSMPSFTPPAPYQMED NPDSLLDKSDLVFVNPVGTGYSAAVAPFKNRNFWGVDEDADSLKQFIKRYLTKNNRWNSPKYLYGESYGTARSCVLAYKL HEDGVDLNGITLQSSILDYRQAGNPVGVLPTAAADAWYHKRLGVMPTPTDLGAFSEEVAQFARTDYLDALRKFPQTDAAV VQKLSDYTGIDTTTLLSWSLDVASYDARGNSVFLTTLLRARGLSLGSYDGRVTAISSGIAGNIDPNSGGNDPTMTAVSGV YTAMWNSYLNEQLKYTSNSAFTDLNDQAFANWDFKHTDPTGKEVGLDAKGNVILYTAGDLAAVMALNPDLKVLSANGFYD FVTPFYQTVLDLQQMPLEDAKVRKNLSARFYPSGHMVYLDGGSRTALKRDVAALYERTVADTGAVMRIRALQAKKRGG
Sequences:
>Translated_558_residues MGNDSGSSASGETFPLHHGAHNSQGVPPTVNPVALARGRDEPFFDPVAYGNGPDDSVSDTTESAAVTHHTAVIGGKRIAY TASAGHLVTVDASSSQPNAKLFYVAFTQDGQKEETRPVTFFYNGGPGSSSVFVLLGSFAPRRIRTSMPSFTPPAPYQMED NPDSLLDKSDLVFVNPVGTGYSAAVAPFKNRNFWGVDEDADSLKQFIKRYLTKNNRWNSPKYLYGESYGTARSCVLAYKL HEDGVDLNGITLQSSILDYRQAGNPVGVLPTAAADAWYHKRLGVMPTPTDLGAFSEEVAQFARTDYLDALRKFPQTDAAV VQKLSDYTGIDTTTLLSWSLDVASYDARGNSVFLTTLLRARGLSLGSYDGRVTAISSGIAGNIDPNSGGNDPTMTAVSGV YTAMWNSYLNEQLKYTSNSAFTDLNDQAFANWDFKHTDPTGKEVGLDAKGNVILYTAGDLAAVMALNPDLKVLSANGFYD FVTPFYQTVLDLQQMPLEDAKVRKNLSARFYPSGHMVYLDGGSRTALKRDVAALYERTVADTGAVMRIRALQAKKRGG >Mature_557_residues GNDSGSSASGETFPLHHGAHNSQGVPPTVNPVALARGRDEPFFDPVAYGNGPDDSVSDTTESAAVTHHTAVIGGKRIAYT ASAGHLVTVDASSSQPNAKLFYVAFTQDGQKEETRPVTFFYNGGPGSSSVFVLLGSFAPRRIRTSMPSFTPPAPYQMEDN PDSLLDKSDLVFVNPVGTGYSAAVAPFKNRNFWGVDEDADSLKQFIKRYLTKNNRWNSPKYLYGESYGTARSCVLAYKLH EDGVDLNGITLQSSILDYRQAGNPVGVLPTAAADAWYHKRLGVMPTPTDLGAFSEEVAQFARTDYLDALRKFPQTDAAVV QKLSDYTGIDTTTLLSWSLDVASYDARGNSVFLTTLLRARGLSLGSYDGRVTAISSGIAGNIDPNSGGNDPTMTAVSGVY TAMWNSYLNEQLKYTSNSAFTDLNDQAFANWDFKHTDPTGKEVGLDAKGNVILYTAGDLAAVMALNPDLKVLSANGFYDF VTPFYQTVLDLQQMPLEDAKVRKNLSARFYPSGHMVYLDGGSRTALKRDVAALYERTVADTGAVMRIRALQAKKRGG
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60345; Mature: 60213
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNDSGSSASGETFPLHHGAHNSQGVPPTVNPVALARGRDEPFFDPVAYGNGPDDSVSDT CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCC TESAAVTHHTAVIGGKRIAYTASAGHLVTVDASSSQPNAKLFYVAFTQDGQKEETRPVTF CHHHHHEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEE FYNGGPGSSSVFVLLGSFAPRRIRTSMPSFTPPAPYQMEDNPDSLLDKSDLVFVNPVGTG EECCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCC YSAAVAPFKNRNFWGVDEDADSLKQFIKRYLTKNNRWNSPKYLYGESYGTARSCVLAYKL CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHEEEEEEEE HEDGVDLNGITLQSSILDYRQAGNPVGVLPTAAADAWYHKRLGVMPTPTDLGAFSEEVAQ CCCCCCCCCEEEHHHHHHHHHCCCCCEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH FARTDYLDALRKFPQTDAAVVQKLSDYTGIDTTTLLSWSLDVASYDARGNSVFLTTLLRA HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECEEEECCCCCEEHHHHHHHH RGLSLGSYDGRVTAISSGIAGNIDPNSGGNDPTMTAVSGVYTAMWNSYLNEQLKYTSNSA HCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC FTDLNDQAFANWDFKHTDPTGKEVGLDAKGNVILYTAGDLAAVMALNPDLKVLSANGFYD CCCCCCCEEECCCCCCCCCCCCEECCCCCCCEEEEECCCEEEEEEECCCEEEEECCCCHH FVTPFYQTVLDLQQMPLEDAKVRKNLSARFYPSGHMVYLDGGSRTALKRDVAALYERTVA HHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHH DTGAVMRIRALQAKKRGG CCCHHEEHHHHHHHCCCC >Mature Secondary Structure GNDSGSSASGETFPLHHGAHNSQGVPPTVNPVALARGRDEPFFDPVAYGNGPDDSVSDT CCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCC TESAAVTHHTAVIGGKRIAYTASAGHLVTVDASSSQPNAKLFYVAFTQDGQKEETRPVTF CHHHHHEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEE FYNGGPGSSSVFVLLGSFAPRRIRTSMPSFTPPAPYQMEDNPDSLLDKSDLVFVNPVGTG EECCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCC YSAAVAPFKNRNFWGVDEDADSLKQFIKRYLTKNNRWNSPKYLYGESYGTARSCVLAYKL CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHEEEEEEEE HEDGVDLNGITLQSSILDYRQAGNPVGVLPTAAADAWYHKRLGVMPTPTDLGAFSEEVAQ CCCCCCCCCEEEHHHHHHHHHCCCCCEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH FARTDYLDALRKFPQTDAAVVQKLSDYTGIDTTTLLSWSLDVASYDARGNSVFLTTLLRA HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECEEEECCCCCEEHHHHHHHH RGLSLGSYDGRVTAISSGIAGNIDPNSGGNDPTMTAVSGVYTAMWNSYLNEQLKYTSNSA HCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC FTDLNDQAFANWDFKHTDPTGKEVGLDAKGNVILYTAGDLAAVMALNPDLKVLSANGFYD CCCCCCCEEECCCCCCCCCCCCEECCCCCCCEEEEECCCEEEEEEECCCEEEEECCCCHH FVTPFYQTVLDLQQMPLEDAKVRKNLSARFYPSGHMVYLDGGSRTALKRDVAALYERTVA HHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHH DTGAVMRIRALQAKKRGG CCCHHEEHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA