| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is aldH [H]
Identifier: 238023833
GI number: 238023833
Start: 440085
End: 441662
Strand: Direct
Name: aldH [H]
Synonym: bglu_2g03710
Alternate gene names: 238023833
Gene position: 440085-441662 (Clockwise)
Preceding gene: 238023820
Following gene: 238023835
Centisome position: 15.57
GC content: 72.88
Gene sequence:
>1578_bases ATGCAATTGACAGGTGAGATGCTGATCGGCGCCGAAGCGGTGAAGGGCACGGCCGGCACGATGCATGCGTTCGACCCCAC GCGTGGCGAAACCATTGCCGAGCCGGCGTTCGGCACCGGCAGCGAGGCCGAGGTCGAGCGCGCCTGCGCGCTCGCGCAGC AGGCGTTCGACGCTTACCGCGCCGAGCCGCTCGAGCGCCGCGCGGCGTTCCTGGAGGCGATCGCCGAGGAGATCCTCGAA CTCGGCGACGCGCTGATCGAGCGCGCGCAGGCCGAGACGGGCCTGCCCGCCGCGCGCCTGCAGGGCGAGCGCGGCCGTAC GGTCGGCCAGCTGCGGATGTTCGCGCGGGTGGTGCGCGACGGTTATTTCCTGCGCGCCTCGGTGGACCCGGCGATGCCGG AGCGCACCCCGCTGCCGCGCGCCGACCTGCGCCTGCAGAAGCTGCCGCTCGGCCCGGTGGCCGTGTTCGGCGCCAGCAAC TTCCCGCTCGCGTTCTCGGTGGCGGGCGGCGATACCGCTTCGGCGCTGGCGGCCGGCTGCCCGGTGATCGTCAAGGCGCA CGAAGCCCACCTCGGCACCTCCGAGCTGGTCGGCCGCGCGATCCAGCGCGCCGTGGCGCGCAGCAACATGCCGGCCGGCG TGTTCTCGCTGCTGATGGGCCCGGGCCGCGTGATCGGCGCCGCGCTCGTCAAGCATCCGGCGATCAAGGCGGTCGGCTTC ACCGGCTCGCGCCAGGGCGGCCTCGCGCTCGTCAACCTCGCGAACGCGCGCCCCGAGCCGATTCCCGTCTACGCGGAAAT GAGCAGCATCAACCCGTTCGTGATGTTCCCGGCCGCGCTCGCGGCCCGCGGCGAGAAGATCGCGCAGGGCTTCATCGATT CGCTGACGATGGGCGTGGGCCAGTTCTGCACCAACCCCGGCCTCGTGATCGCCGTGGACGGCGCCGAGCTCGATGCGTTC TCGCGGGCCGCGGCCGCCGCGCTCGCCGGCAAGCCGGCCGGCACCATGCTCACGCGCGGCATCGCCGACGCGTATCGCGC CGGCCGCGCGAAGCTGCAGGAAGCCCCCGGCGTGCGCCAGCTCGGCGCAGGCGGCGCGGGCGAGGGCGGCTGCGCGCTGT CCGGCGCGCTGTTCGACGTGGACGCGCAGACCTTCCTGCGCGAGCATGCGCTGCGCGACGAGGTGTTCGGCCCGGCCTCG CTGATCGTGCGCTGCCGCGATTTCGACGAAGTCGCGGCCGTGCTCGAATCGCTCGAAGGCCAGCTCACGGCCACGCTGCA GATCGACGACGCCGATCTGGCAGCGGCCCGCAAGCTGCTGCCGATCCTCGAACGCAAGGCCGGCCGCCTGCTCGTGAACG GCTTCCCTACCGGCGTCGAGGTGTGCGACGCGATGGTCCACGGCGGCCCGTTCCCGGCCACCTCGAACGCGATGACCACC TCGGTCGGCGCGACCGCGATCGAGCGCTTCCTGCGTCCGGTCTGCTACCAGGACTTCCCGGAATCGTTGCTGCCGGAAAG CCTGCGCGAGTCGAACCCGCTCGGCCTCGCGCGCCTGCGCAACGGCCGGCCCGAGTAA
Upstream 100 bases:
>100_bases CCGGCCGCATGCCGGGGCGCGTGATTCTTCTAGTCAGTCATCGTATCTGCTGGGCTACAATGCGCGATACGAATCTTTTT TCGACTGACGGAGCATAGCG
Downstream 100 bases:
>100_bases GCCGGTCGGGACCGGCGCGGCGACGCTCTCCGAGGCGTGCGCCGTGCCGGTCCGGCTTTTTGGCCGGCTTCGAGGCGGCG GCGTCGAAGCCGGTGCTTTT
Product: aldehyde dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MQLTGEMLIGAEAVKGTAGTMHAFDPTRGETIAEPAFGTGSEAEVERACALAQQAFDAYRAEPLERRAAFLEAIAEEILE LGDALIERAQAETGLPAARLQGERGRTVGQLRMFARVVRDGYFLRASVDPAMPERTPLPRADLRLQKLPLGPVAVFGASN FPLAFSVAGGDTASALAAGCPVIVKAHEAHLGTSELVGRAIQRAVARSNMPAGVFSLLMGPGRVIGAALVKHPAIKAVGF TGSRQGGLALVNLANARPEPIPVYAEMSSINPFVMFPAALAARGEKIAQGFIDSLTMGVGQFCTNPGLVIAVDGAELDAF SRAAAAALAGKPAGTMLTRGIADAYRAGRAKLQEAPGVRQLGAGGAGEGGCALSGALFDVDAQTFLREHALRDEVFGPAS LIVRCRDFDEVAAVLESLEGQLTATLQIDDADLAAARKLLPILERKAGRLLVNGFPTGVEVCDAMVHGGPFPATSNAMTT SVGATAIERFLRPVCYQDFPESLLPESLRESNPLGLARLRNGRPE
Sequences:
>Translated_525_residues MQLTGEMLIGAEAVKGTAGTMHAFDPTRGETIAEPAFGTGSEAEVERACALAQQAFDAYRAEPLERRAAFLEAIAEEILE LGDALIERAQAETGLPAARLQGERGRTVGQLRMFARVVRDGYFLRASVDPAMPERTPLPRADLRLQKLPLGPVAVFGASN FPLAFSVAGGDTASALAAGCPVIVKAHEAHLGTSELVGRAIQRAVARSNMPAGVFSLLMGPGRVIGAALVKHPAIKAVGF TGSRQGGLALVNLANARPEPIPVYAEMSSINPFVMFPAALAARGEKIAQGFIDSLTMGVGQFCTNPGLVIAVDGAELDAF SRAAAAALAGKPAGTMLTRGIADAYRAGRAKLQEAPGVRQLGAGGAGEGGCALSGALFDVDAQTFLREHALRDEVFGPAS LIVRCRDFDEVAAVLESLEGQLTATLQIDDADLAAARKLLPILERKAGRLLVNGFPTGVEVCDAMVHGGPFPATSNAMTT SVGATAIERFLRPVCYQDFPESLLPESLRESNPLGLARLRNGRPE >Mature_525_residues MQLTGEMLIGAEAVKGTAGTMHAFDPTRGETIAEPAFGTGSEAEVERACALAQQAFDAYRAEPLERRAAFLEAIAEEILE LGDALIERAQAETGLPAARLQGERGRTVGQLRMFARVVRDGYFLRASVDPAMPERTPLPRADLRLQKLPLGPVAVFGASN FPLAFSVAGGDTASALAAGCPVIVKAHEAHLGTSELVGRAIQRAVARSNMPAGVFSLLMGPGRVIGAALVKHPAIKAVGF TGSRQGGLALVNLANARPEPIPVYAEMSSINPFVMFPAALAARGEKIAQGFIDSLTMGVGQFCTNPGLVIAVDGAELDAF SRAAAAALAGKPAGTMLTRGIADAYRAGRAKLQEAPGVRQLGAGGAGEGGCALSGALFDVDAQTFLREHALRDEVFGPAS LIVRCRDFDEVAAVLESLEGQLTATLQIDDADLAAARKLLPILERKAGRLLVNGFPTGVEVCDAMVHGGPFPATSNAMTT SVGATAIERFLRPVCYQDFPESLLPESLRESNPLGLARLRNGRPE
Specific function: Catalyzes the oxidation of long-chain aliphatic aldehydes to acids. May be implicated in controlling luminescence as it catalyzes the oxidation of the fatty aldehyde substrate for the light-emitting reaction [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI21614513, Length=361, Percent_Identity=24.9307479224377, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI12007648, Length=421, Percent_Identity=23.0403800475059, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI25952152, Length=267, Percent_Identity=26.2172284644195, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI87081896, Length=453, Percent_Identity=27.5938189845475, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788042, Length=324, Percent_Identity=28.3950617283951, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1789015, Length=441, Percent_Identity=26.0770975056689, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786504, Length=473, Percent_Identity=26.4270613107822, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323821, Length=429, Percent_Identity=26.3403263403263, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324950, Length=453, Percent_Identity=22.9580573951435, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6323822, Length=430, Percent_Identity=25.8139534883721, Blast_Score=70, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6319478, Length=277, Percent_Identity=24.9097472924188, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6320917, Length=476, Percent_Identity=24.3697478991597, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI281362580, Length=290, Percent_Identity=25.5172413793103, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI62472918, Length=290, Percent_Identity=25.5172413793103, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI62472926, Length=290, Percent_Identity=25.5172413793103, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI62472936, Length=290, Percent_Identity=25.5172413793103, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21356737, Length=290, Percent_Identity=25.5172413793103, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 [H]
Pfam domain/function: PF00171 Aldedh [H]
EC number: =1.2.1.4 [H]
Molecular weight: Translated: 54867; Mature: 54867
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLTGEMLIGAEAVKGTAGTMHAFDPTRGETIAEPAFGTGSEAEVERACALAQQAFDAYR CCCCCCHHCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AEPLERRAAFLEAIAEEILELGDALIERAQAETGLPAARLQGERGRTVGQLRMFARVVRD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHC GYFLRASVDPAMPERTPLPRADLRLQKLPLGPVAVFGASNFPLAFSVAGGDTASALAAGC CEEEEEECCCCCCCCCCCCHHCCEEECCCCCCEEEECCCCCCEEEEECCCCHHHHHHCCC PVIVKAHEAHLGTSELVGRAIQRAVARSNMPAGVFSLLMGPGRVIGAALVKHPAIKAVGF CEEEEECHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEECC TGSRQGGLALVNLANARPEPIPVYAEMSSINPFVMFPAALAARGEKIAQGFIDSLTMGVG CCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH QFCTNPGLVIAVDGAELDAFSRAAAAALAGKPAGTMLTRGIADAYRAGRAKLQEAPGVRQ HHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH LGAGGAGEGGCALSGALFDVDAQTFLREHALRDEVFGPASLIVRCRDFDEVAAVLESLEG HCCCCCCCCCCEECCCEEECCHHHHHHHHHHHHHCCCCHHHHEEECCHHHHHHHHHHCCC QLTATLQIDDADLAAARKLLPILERKAGRLLVNGFPTGVEVCDAMVHGGPFPATSNAMTT CEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHH SVGATAIERFLRPVCYQDFPESLLPESLRESNPLGLARLRNGRPE HHHHHHHHHHHHHHHHHCCCHHHCHHHHHCCCCCCHHHHCCCCCC >Mature Secondary Structure MQLTGEMLIGAEAVKGTAGTMHAFDPTRGETIAEPAFGTGSEAEVERACALAQQAFDAYR CCCCCCHHCCHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AEPLERRAAFLEAIAEEILELGDALIERAQAETGLPAARLQGERGRTVGQLRMFARVVRD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHC GYFLRASVDPAMPERTPLPRADLRLQKLPLGPVAVFGASNFPLAFSVAGGDTASALAAGC CEEEEEECCCCCCCCCCCCHHCCEEECCCCCCEEEECCCCCCEEEEECCCCHHHHHHCCC PVIVKAHEAHLGTSELVGRAIQRAVARSNMPAGVFSLLMGPGRVIGAALVKHPAIKAVGF CEEEEECHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEECC TGSRQGGLALVNLANARPEPIPVYAEMSSINPFVMFPAALAARGEKIAQGFIDSLTMGVG CCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH QFCTNPGLVIAVDGAELDAFSRAAAAALAGKPAGTMLTRGIADAYRAGRAKLQEAPGVRQ HHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH LGAGGAGEGGCALSGALFDVDAQTFLREHALRDEVFGPASLIVRCRDFDEVAAVLESLEG HCCCCCCCCCCEECCCEEECCHHHHHHHHHHHHHCCCCHHHHEEECCHHHHHHHHHHCCC QLTATLQIDDADLAAARKLLPILERKAGRLLVNGFPTGVEVCDAMVHGGPFPATSNAMTT CEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHH SVGATAIERFLRPVCYQDFPESLLPESLRESNPLGLARLRNGRPE HHHHHHHHHHHHHHHHHCCCHHHCHHHHHCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8527447; 10903148 [H]