| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yaiN [C]
Identifier: 238023810
GI number: 238023810
Start: 410566
End: 410847
Strand: Direct
Name: yaiN [C]
Synonym: bglu_2g03480
Alternate gene names: 238023810
Gene position: 410566-410847 (Clockwise)
Preceding gene: 339717965
Following gene: 238023811
Centisome position: 14.52
GC content: 64.54
Gene sequence:
>282_bases ATGAGCCACACCGTCAAGGACAAGCAGAAGCTGCTGAACCGCGTTCGCCGCATCAAGGGGCAGCTGGAAGCCGTCGAGCG CGCGCTCGAGGAAGAGCATGGCTGCAACAACGTGCTGCAGCGGCTGACCAGTTGCCGCGGCGCGATGAACGGACTGCTCG CGGCCGTGCTCGAGTCGCACATCCGCGAGCATCTGGTGGACGCGCCGGCGTTCCAACCTGACGAGGCCGGCGGCAGGGCG ACCGAGCAACTGATCGAGGTCGTCCACAGTTACTTCAAGTAA
Upstream 100 bases:
>100_bases CGAGACTCATGAGATTCGCCCGGGAACCCCGTCGGGTTGCCGATTTCACAATCGGGTTTTACTGCAAGGTATACCCCCCT ATGGTATATTCGCACTCACC
Downstream 100 bases:
>100_bases GGAGAGGGGAAGTGCGATGAACGAAACATTGGGCATGAAGTCCGGACCTGTACGGCACGAGCATGTGTTTCTCGGCGCCG AGCATGCGAGCCGCGAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSHTVKDKQKLLNRVRRIKGQLEAVERALEEEHGCNNVLQRLTSCRGAMNGLLAAVLESHIREHLVDAPAFQPDEAGGRA TEQLIEVVHSYFK
Sequences:
>Translated_93_residues MSHTVKDKQKLLNRVRRIKGQLEAVERALEEEHGCNNVLQRLTSCRGAMNGLLAAVLESHIREHLVDAPAFQPDEAGGRA TEQLIEVVHSYFK >Mature_92_residues SHTVKDKQKLLNRVRRIKGQLEAVERALEEEHGCNNVLQRLTSCRGAMNGLLAAVLESHIREHLVDAPAFQPDEAGGRAT EQLIEVVHSYFK
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=97, Percent_Identity=44.3298969072165, Blast_Score=79, Evalue=5e-17, Organism=Escherichia coli, GI1788422, Length=94, Percent_Identity=41.4893617021277, Blast_Score=73, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 10459; Mature: 10328
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTVKDKQKLLNRVRRIKGQLEAVERALEEEHGCNNVLQRLTSCRGAMNGLLAAVLESH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH IREHLVDAPAFQPDEAGGRATEQLIEVVHSYFK HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure SHTVKDKQKLLNRVRRIKGQLEAVERALEEEHGCNNVLQRLTSCRGAMNGLLAAVLESH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH IREHLVDAPAFQPDEAGGRATEQLIEVVHSYFK HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA