| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023808
Identifier: 238023808
GI number: 238023808
Start: 408327
End: 409163
Strand: Reverse
Name: 238023808
Synonym: bglu_2g03460
Alternate gene names: NA
Gene position: 409163-408327 (Counterclockwise)
Preceding gene: 238023813
Following gene: 238023807
Centisome position: 14.47
GC content: 72.52
Gene sequence:
>837_bases ATGGATCATCTGCTGGTCGCCCTCGTCCTGTTCTCCGCGCTGCTGCATGCGGTCTGGAACGCGTTTCTGCATGTCAGCGA GGATCGCGTGATCCAGCTCGGCACCATGGCGCTTCCCTATCTGGCGGCGGGTGCGGCCGGCGCGCTGTGGCTGCCGGCGC CGGCGCCCGGCGCGTGGCCCTGCATCGCCGCCTCGGCGACGCTCGAACTCGGCTATTGCCTCGCGCTGCTGCGAGCCTAC CGCAGCGGCGAATTCAGCCAGATCTACCCGATCGCGCGCGGCAGCTCCCCGCTGCTGATCGCGCTGCTGGCGCTGCCCGC GCTCGGCGAGCGGCCGTCGGCCTGGGGGCTCGCCGGCATCGTGCTGGTCTCGCTCGGCATCATGTCGCTCGGGCTGCGGC GCGGCCTGCGGCTGTCCGGCGAGAGCGTGCCCTACGCGGTGCTCACCGGCGTGTTCATCGCCGCCTACTCGGTGGTGGAC GGCATCGGCGTGCGGCTCGCCGGCAATTCGCTGTCGTACGTCTGCTGGGTCTATCTGCTCTGGAACCTGCCGCAGTTCGC GCTCGTCTGCGCGCTGCGCGGCGGCCCGCGGCGGCTGCTGGCGTCGCGCGCCACGCTCTGGCGCGGCGTGGGCGCCGGCA CCTGCGCGCTCGGCGCCTATGCGATCGTCACGCTCGCGTACCGGCATCTGCCGGTGGCCAGCGTGTCGGCGCTGCGCGAG ACGAGCTCGATCTTCGCGATCGGCATCGGCTGGTTCGCGCTGCGCGAGCGCCCCACCGCGCGGCGGCTCGCAGCCTGCGT GATGGTAGCTGCCGGGGCCGTGCTGATCCGGATGTGA
Upstream 100 bases:
>100_bases CACGCCTTGCCTCATTTTGCCTATCTTTGCCTCATCACCGCTTTCCGGCTCGCGGCTCCCTGCCGGCCGGCATCGAGCGC GCCTGGCGCGCCCCGACAAC
Downstream 100 bases:
>100_bases GGCATGCCAGCCGGTCGGCACGGCCGATGCGGCAACGCGATCGTCCCCGCGCCACGGCCATCGCATGCCTGCCGGCGGCC GCTTGCCTGACCGCGGCATG
Product: putative transmembrane protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Transporter Dme Family; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; DMT Superfamily Permease; Drug/Metabolite Transporter Superfamily Permease; Inner Membrane Protein; Transporter DME Family DMT Superfamily; Drug/Metabolite Exporter Family Protein; Transporter Of DMT Superfamily; DMT Family Permease
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MDHLLVALVLFSALLHAVWNAFLHVSEDRVIQLGTMALPYLAAGAAGALWLPAPAPGAWPCIAASATLELGYCLALLRAY RSGEFSQIYPIARGSSPLLIALLALPALGERPSAWGLAGIVLVSLGIMSLGLRRGLRLSGESVPYAVLTGVFIAAYSVVD GIGVRLAGNSLSYVCWVYLLWNLPQFALVCALRGGPRRLLASRATLWRGVGAGTCALGAYAIVTLAYRHLPVASVSALRE TSSIFAIGIGWFALRERPTARRLAACVMVAAGAVLIRM
Sequences:
>Translated_278_residues MDHLLVALVLFSALLHAVWNAFLHVSEDRVIQLGTMALPYLAAGAAGALWLPAPAPGAWPCIAASATLELGYCLALLRAY RSGEFSQIYPIARGSSPLLIALLALPALGERPSAWGLAGIVLVSLGIMSLGLRRGLRLSGESVPYAVLTGVFIAAYSVVD GIGVRLAGNSLSYVCWVYLLWNLPQFALVCALRGGPRRLLASRATLWRGVGAGTCALGAYAIVTLAYRHLPVASVSALRE TSSIFAIGIGWFALRERPTARRLAACVMVAAGAVLIRM >Mature_278_residues MDHLLVALVLFSALLHAVWNAFLHVSEDRVIQLGTMALPYLAAGAAGALWLPAPAPGAWPCIAASATLELGYCLALLRAY RSGEFSQIYPIARGSSPLLIALLALPALGERPSAWGLAGIVLVSLGIMSLGLRRGLRLSGESVPYAVLTGVFIAAYSVVD GIGVRLAGNSLSYVCWVYLLWNLPQFALVCALRGGPRRLLASRATLWRGVGAGTCALGAYAIVTLAYRHLPVASVSALRE TSSIFAIGIGWFALRERPTARRLAACVMVAAGAVLIRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29336; Mature: 29336
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHLLVALVLFSALLHAVWNAFLHVSEDRVIQLGTMALPYLAAGAAGALWLPAPAPGAWP CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCEEECCCCCCCCH CIAASATLELGYCLALLRAYRSGEFSQIYPIARGSSPLLIALLALPALGERPSAWGLAGI HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHH VLVSLGIMSLGLRRGLRLSGESVPYAVLTGVFIAAYSVVDGIGVRLAGNSLSYVCWVYLL HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH WNLPQFALVCALRGGPRRLLASRATLWRGVGAGTCALGAYAIVTLAYRHLPVASVSALRE HCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH TSSIFAIGIGWFALRERPTARRLAACVMVAAGAVLIRM HHCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MDHLLVALVLFSALLHAVWNAFLHVSEDRVIQLGTMALPYLAAGAAGALWLPAPAPGAWP CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCEEECCCCCCCCH CIAASATLELGYCLALLRAYRSGEFSQIYPIARGSSPLLIALLALPALGERPSAWGLAGI HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHH VLVSLGIMSLGLRRGLRLSGESVPYAVLTGVFIAAYSVVDGIGVRLAGNSLSYVCWVYLL HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH WNLPQFALVCALRGGPRRLLASRATLWRGVGAGTCALGAYAIVTLAYRHLPVASVSALRE HCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH TSSIFAIGIGWFALRERPTARRLAACVMVAAGAVLIRM HHCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA