| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is chvI [H]
Identifier: 238023807
GI number: 238023807
Start: 405912
End: 406274
Strand: Reverse
Name: chvI [H]
Synonym: bglu_2g03440
Alternate gene names: 238023807
Gene position: 406274-405912 (Counterclockwise)
Preceding gene: 238023808
Following gene: 238023806
Centisome position: 14.37
GC content: 67.22
Gene sequence:
>363_bases ATGAAAACAATCCTGCTGGTAGACGACGAATTCGATGTGCTGGTGGTGTGGCGCCTGCTGCTGGAACAGGCCGGCTATCG CGTACTCACGGCGCCCAGCGGCGCGGCGGCGCTGGAGGCGATCAGGGCACGGCCGCCGGACCTGGTGGTGACCGACTTCA TGATGCCGGAGATGTCGGGCGCGGACGTCTGCGCCGCCCTGGCGGCCGAACCGGCATGGCGCGGCATCCCGATCATCCTT TGCAGCTCGCGCGACGCCATCCCCTTGCAGCCGAATCCGCTGATCGCCTATGCACGCAAGCCGCTCGCGTTCGACCGTCT GCGCGAGATGATAGGGAAGCTGCTGGAGGGGTCCGCGCCGTGA
Upstream 100 bases:
>100_bases CTCGGCCTCACCGATGAACCGACGCGCTCCCCCAGGCCCGGCCCCTTTCCCGCGAAGGGACGATGAGCCCGAATCGCCAC GCAACGGACGCTAGCGACAG
Downstream 100 bases:
>100_bases CGCTTCGCACGCCCTTGCCGGTGCCTTTCGCGCCGGGCAGCCGATTTTGGCCAGCCCGGTGCGGCGCCGGCTTGGGTCCG GCATAGCGGCGGTTGCGGGG
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MKTILLVDDEFDVLVVWRLLLEQAGYRVLTAPSGAAALEAIRARPPDLVVTDFMMPEMSGADVCAALAAEPAWRGIPIIL CSSRDAIPLQPNPLIAYARKPLAFDRLREMIGKLLEGSAP
Sequences:
>Translated_120_residues MKTILLVDDEFDVLVVWRLLLEQAGYRVLTAPSGAAALEAIRARPPDLVVTDFMMPEMSGADVCAALAAEPAWRGIPIIL CSSRDAIPLQPNPLIAYARKPLAFDRLREMIGKLLEGSAP >Mature_120_residues MKTILLVDDEFDVLVVWRLLLEQAGYRVLTAPSGAAALEAIRARPPDLVVTDFMMPEMSGADVCAALAAEPAWRGIPIIL CSSRDAIPLQPNPLIAYARKPLAFDRLREMIGKLLEGSAP
Specific function: Member of a two-component regulatory system ChvG/ChvI [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 13057; Mature: 13057
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTILLVDDEFDVLVVWRLLLEQAGYRVLTAPSGAAALEAIRARPPDLVVTDFMMPEMSG CCEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCC ADVCAALAAEPAWRGIPIILCSSRDAIPLQPNPLIAYARKPLAFDRLREMIGKLLEGSAP CHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTILLVDDEFDVLVVWRLLLEQAGYRVLTAPSGAAALEAIRARPPDLVVTDFMMPEMSG CCEEEEECCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCC ADVCAALAAEPAWRGIPIILCSSRDAIPLQPNPLIAYARKPLAFDRLREMIGKLLEGSAP CHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407839 [H]