| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238023806
Identifier: 238023806
GI number: 238023806
Start: 404355
End: 405245
Strand: Reverse
Name: 238023806
Synonym: bglu_2g03420
Alternate gene names: NA
Gene position: 405245-404355 (Counterclockwise)
Preceding gene: 238023807
Following gene: 238023805
Centisome position: 14.33
GC content: 70.03
Gene sequence:
>891_bases ATGTTCACCCACAATTCCCGCCTGCAGTACACCGTTCGCGTCGCGACGCCGAATCCGGGCCTCGCCAACCTGTTGCTGGA ACAGTTCGGCGGCCCGCAGGGCGAGCTCGCGGCGGCCATGCGGTATTTCACGCAGGCCGTCACCGAGGAAGACCCGGGCC GCAAGGACATGCTGCTCGACATCGCCACCGAGGAGCTGAGCCATCTGGAGGTGATCGGCTCGCTGGTGGCGATGCTCAAT CGCGGCGCCAAGGGCGAGCTGGCAGAAGCGGTGGACCATCAGGCGGACCTCTACCGCAAGCTGCAGGGCGCGGGCAACGA CAGCCATCTCACGCAGGTGCTGTACGGGGCGGGAACGCCTCTCACGAACTCGGGCGGCGTGCCATGGACGGCCGCCTATC TCGACACGATCGGCGAGCCCACGGCCGACCTGCGCTCGAACATCGCCGCGGAGGCACGCGCCAAGATCATCTATGAACGG CTCATCAACGTCTGCGACGACGCCGGCGTGCGCGACGCGCTCGGCTTCCTGATGACGCGAGAGGTCTCGCACCAGATCTC GTTCGAGAAGGCGCTCTACGCGATCACGGCGAACTTCCCGCCGGGCAAGCTGCCGCCGAACCCGCCCTTCGATCACGTGT ACTTCGACATGTCGCCCGACGCGCCGCCGGTGCCGGGGCCGTGGAACCGCGGCGACGGACTGGAGGCACGCGAGGCCGAG CCGGCCGTCGACGGCGGCGACGGGTCCGCCAGCGTGACGCTGGACGGCGAGCAGGACGCCGCCATCCGCGCGATGGCCAG GCGGCTCGAATCCGACCCTGCCGTCGACCCGACCACCGGCGCCGAACTGGGCCGCGACGGCCCGATCCCGCGCGACGGCG GCGCGCGGTGA
Upstream 100 bases:
>100_bases CGCCGCGCTTTGCGATAACGCGGCGCACGGTGCGCAGCCGGACCGACGCTTCCCGACAAACTTTGTAAAAACCGACGCCG TCATTCGTCAAGGAGTGCTC
Downstream 100 bases:
>100_bases GCGCGCCGAGCACATCCCCCGGACGCATCGTCTACGACAGGAGGCAAGCATGATTGGCAACGACACCCCCACCGACAAGC ATCTGAACGACTGGCTGCGC
Product: Mn-containing catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MFTHNSRLQYTVRVATPNPGLANLLLEQFGGPQGELAAAMRYFTQAVTEEDPGRKDMLLDIATEELSHLEVIGSLVAMLN RGAKGELAEAVDHQADLYRKLQGAGNDSHLTQVLYGAGTPLTNSGGVPWTAAYLDTIGEPTADLRSNIAAEARAKIIYER LINVCDDAGVRDALGFLMTREVSHQISFEKALYAITANFPPGKLPPNPPFDHVYFDMSPDAPPVPGPWNRGDGLEAREAE PAVDGGDGSASVTLDGEQDAAIRAMARRLESDPAVDPTTGAELGRDGPIPRDGGAR
Sequences:
>Translated_296_residues MFTHNSRLQYTVRVATPNPGLANLLLEQFGGPQGELAAAMRYFTQAVTEEDPGRKDMLLDIATEELSHLEVIGSLVAMLN RGAKGELAEAVDHQADLYRKLQGAGNDSHLTQVLYGAGTPLTNSGGVPWTAAYLDTIGEPTADLRSNIAAEARAKIIYER LINVCDDAGVRDALGFLMTREVSHQISFEKALYAITANFPPGKLPPNPPFDHVYFDMSPDAPPVPGPWNRGDGLEAREAE PAVDGGDGSASVTLDGEQDAAIRAMARRLESDPAVDPTTGAELGRDGPIPRDGGAR >Mature_296_residues MFTHNSRLQYTVRVATPNPGLANLLLEQFGGPQGELAAAMRYFTQAVTEEDPGRKDMLLDIATEELSHLEVIGSLVAMLN RGAKGELAEAVDHQADLYRKLQGAGNDSHLTQVLYGAGTPLTNSGGVPWTAAYLDTIGEPTADLRSNIAAEARAKIIYER LINVCDDAGVRDALGFLMTREVSHQISFEKALYAITANFPPGKLPPNPPFDHVYFDMSPDAPPVPGPWNRGDGLEAREAE PAVDGGDGSASVTLDGEQDAAIRAMARRLESDPAVDPTTGAELGRDGPIPRDGGAR
Specific function: Unknown
COG id: COG3546
COG function: function code P; Mn-containing catalase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the manganese catalase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007760 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF05067 Mn_catalase [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 31615; Mature: 31615
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTHNSRLQYTVRVATPNPGLANLLLEQFGGPQGELAAAMRYFTQAVTEEDPGRKDMLLD CCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH IATEELSHLEVIGSLVAMLNRGAKGELAEAVDHQADLYRKLQGAGNDSHLTQVLYGAGTP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC LTNSGGVPWTAAYLDTIGEPTADLRSNIAAEARAKIIYERLINVCDDAGVRDALGFLMTR CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EVSHQISFEKALYAITANFPPGKLPPNPPFDHVYFDMSPDAPPVPGPWNRGDGLEAREAE HHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC PAVDGGDGSASVTLDGEQDAAIRAMARRLESDPAVDPTTGAELGRDGPIPRDGGAR CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure MFTHNSRLQYTVRVATPNPGLANLLLEQFGGPQGELAAAMRYFTQAVTEEDPGRKDMLLD CCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH IATEELSHLEVIGSLVAMLNRGAKGELAEAVDHQADLYRKLQGAGNDSHLTQVLYGAGTP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC LTNSGGVPWTAAYLDTIGEPTADLRSNIAAEARAKIIYERLINVCDDAGVRDALGFLMTR CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EVSHQISFEKALYAITANFPPGKLPPNPPFDHVYFDMSPDAPPVPGPWNRGDGLEAREAE HHHHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC PAVDGGDGSASVTLDGEQDAAIRAMARRLESDPAVDPTTGAELGRDGPIPRDGGAR CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]