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The map label for this gene is ydeR [H]

Identifier: 238023780

GI number: 238023780

Start: 366660

End: 367946

Strand: Direct

Name: ydeR [H]

Synonym: bglu_2g03140

Alternate gene names: 238023780

Gene position: 366660-367946 (Clockwise)

Preceding gene: 238023778

Following gene: 238023781

Centisome position: 12.97

GC content: 74.9

Gene sequence:

>1287_bases
ATGACCTCGACCCGTGACCTCGATTCCACCGGCTGCAACGGCTGCGAAGCCACCCTGCCGCCGGCCGCGGCGGCCTCTCG
TGCGCCGCGCGCGGCCGAGCCCGCCGCGCACGGCCAGCCGTCCGTGCTGACGCCGCGCCTCGTGCTGCTGCTGGCCGCGG
CCGCCGGGCTCGGCGTGGCGCCGCTCTACTACAGTCAGCCGATGCTCGGCGTGCTGGGGCCGGACATCGGCGCCTCCGCG
CGCGCCGTCGGTTTCGTGCCGACCCTCACGCAGCTCGGCTACGCGCTCGGCATCCTGCTGCTGGCGCCGCTGGGCGACCG
CTACGACCGGCGCCGCGTGATCCTGATCAAGGCCGCCGTGCTGGTCGGCGCGCTGCTGCTCGCCGCGCTCGCGCCGTCGA
TCGGCCTGCTGCTCGCTGCGAGCTTCGCGGTCGGACTCGCGGCGACGCTCGCGCAGGACGTGGTGCCGGCCGGCGCGGCG
CTCGCGCCCGACGCGCACCGCGGCAGGGTGGTCGGCACCGTGATGACCGGCCTGCTGCTCGGCATCCTGCTGTCGCGCGT
GGTGGCCGGCGTGGTGGCCGGCAGCCTCGGCTGGCGTGCGACCTTCGTGTTCGCGGCGCTCAGCGTGGCGGTGATCGGCG
TGGCCGCGGCGCGCGGGCTGCCGAGCTTCCGGCCCACCACGCAGCTGCCGTATCGCGAGCTGATCGTCTCGCTCGGCCAT
CTGTGGCGCCGCCACCCGGCGCTGCGCCGCGCCGCGTTCGCGCAGGGGATTCTCGCGATCGGCTTCAGCGCGTTCTGGAC
CACGCTCGCCGTGATGCTGCATGGCGCGCCGTTCCATCTCGGCAGCGCGGCGGCCGGTGCGTTCGGTCTGGCCGGCGCGG
CGGGCGCGCTGGCCGCGCCGCTTGCCGGCCGGCTGGCCGACCGGCGCGGCGCGGAGTCCGTGACACGGCTCGGCATTGGC
GTGGCCACCGTGTCGTTCGCGGCGATGGGGCTTGCGCCGCTGATGCCGGTGCCGGCTCAGCTGGCACTGATCGCCTTGTG
CACGGTCGGCTTTGATCTCGGCTTCCAGTCCACGCTGATCGCGCACCAGACGATCGTCTACGGCATCGATCCGGCTTCGC
GCAGCCGGCTCAACGCCGTGCTGTTCGTCGGCATGTTCATCGGCATGTCGGGCGGCGCGGCGCTCGGCACGCTGCTGTTC
GCGCAGTGGGGCTGGACGGCGGTGGTCGTGATGGCCGTGGCGACCTCGCTCGTGGCCCTGGCGGTGAGGTGGTGGCGGCG
CGCGTGA

Upstream 100 bases:

>100_bases
GCGGAGCGTATAACAAATGTGCGGGCGGTGCTACTACCGGGAGCGCGCCCTGCCAATCACACTCGCGTTCCATATTCAAG
ACGACCCGGAACCGCATCCC

Downstream 100 bases:

>100_bases
GCGCCGCGGCGCCTGCACGACGCGGGCATGATGCGGGCATGATGCGGCCATGATGCGGGCGGGCCGGGAAGCTCCCCCGT
TTGCGTCGGGCGAAGGCGCG

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MTSTRDLDSTGCNGCEATLPPAAAASRAPRAAEPAAHGQPSVLTPRLVLLLAAAAGLGVAPLYYSQPMLGVLGPDIGASA
RAVGFVPTLTQLGYALGILLLAPLGDRYDRRRVILIKAAVLVGALLLAALAPSIGLLLAASFAVGLAATLAQDVVPAGAA
LAPDAHRGRVVGTVMTGLLLGILLSRVVAGVVAGSLGWRATFVFAALSVAVIGVAAARGLPSFRPTTQLPYRELIVSLGH
LWRRHPALRRAAFAQGILAIGFSAFWTTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAPLAGRLADRRGAESVTRLGIG
VATVSFAAMGLAPLMPVPAQLALIALCTVGFDLGFQSTLIAHQTIVYGIDPASRSRLNAVLFVGMFIGMSGGAALGTLLF
AQWGWTAVVVMAVATSLVALAVRWWRRA

Sequences:

>Translated_428_residues
MTSTRDLDSTGCNGCEATLPPAAAASRAPRAAEPAAHGQPSVLTPRLVLLLAAAAGLGVAPLYYSQPMLGVLGPDIGASA
RAVGFVPTLTQLGYALGILLLAPLGDRYDRRRVILIKAAVLVGALLLAALAPSIGLLLAASFAVGLAATLAQDVVPAGAA
LAPDAHRGRVVGTVMTGLLLGILLSRVVAGVVAGSLGWRATFVFAALSVAVIGVAAARGLPSFRPTTQLPYRELIVSLGH
LWRRHPALRRAAFAQGILAIGFSAFWTTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAPLAGRLADRRGAESVTRLGIG
VATVSFAAMGLAPLMPVPAQLALIALCTVGFDLGFQSTLIAHQTIVYGIDPASRSRLNAVLFVGMFIGMSGGAALGTLLF
AQWGWTAVVVMAVATSLVALAVRWWRRA
>Mature_427_residues
TSTRDLDSTGCNGCEATLPPAAAASRAPRAAEPAAHGQPSVLTPRLVLLLAAAAGLGVAPLYYSQPMLGVLGPDIGASAR
AVGFVPTLTQLGYALGILLLAPLGDRYDRRRVILIKAAVLVGALLLAALAPSIGLLLAASFAVGLAATLAQDVVPAGAAL
APDAHRGRVVGTVMTGLLLGILLSRVVAGVVAGSLGWRATFVFAALSVAVIGVAAARGLPSFRPTTQLPYRELIVSLGHL
WRRHPALRRAAFAQGILAIGFSAFWTTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAPLAGRLADRRGAESVTRLGIGV
ATVSFAAMGLAPLMPVPAQLALIALCTVGFDLGFQSTLIAHQTIVYGIDPASRSRLNAVLFVGMFIGMSGGAALGTLLFA
QWGWTAVVVMAVATSLVALAVRWWRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=394, Percent_Identity=25.6345177664975, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43509; Mature: 43378

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTRDLDSTGCNGCEATLPPAAAASRAPRAAEPAAHGQPSVLTPRLVLLLAAAAGLGVA
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PLYYSQPMLGVLGPDIGASARAVGFVPTLTQLGYALGILLLAPLGDRYDRRRVILIKAAV
CHHHCCCCHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHH
LVGALLLAALAPSIGLLLAASFAVGLAATLAQDVVPAGAALAPDAHRGRVVGTVMTGLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
GILLSRVVAGVVAGSLGWRATFVFAALSVAVIGVAAARGLPSFRPTTQLPYRELIVSLGH
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LWRRHPALRRAAFAQGILAIGFSAFWTTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAP
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LAGRLADRRGAESVTRLGIGVATVSFAAMGLAPLMPVPAQLALIALCTVGFDLGFQSTLI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH
AHQTIVYGIDPASRSRLNAVLFVGMFIGMSGGAALGTLLFAQWGWTAVVVMAVATSLVAL
HHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AVRWWRRA
HHHHHHCC
>Mature Secondary Structure 
TSTRDLDSTGCNGCEATLPPAAAASRAPRAAEPAAHGQPSVLTPRLVLLLAAAAGLGVA
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PLYYSQPMLGVLGPDIGASARAVGFVPTLTQLGYALGILLLAPLGDRYDRRRVILIKAAV
CHHHCCCCHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHH
LVGALLLAALAPSIGLLLAASFAVGLAATLAQDVVPAGAALAPDAHRGRVVGTVMTGLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
GILLSRVVAGVVAGSLGWRATFVFAALSVAVIGVAAARGLPSFRPTTQLPYRELIVSLGH
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LWRRHPALRRAAFAQGILAIGFSAFWTTLAVMLHGAPFHLGSAAAGAFGLAGAAGALAAP
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
LAGRLADRRGAESVTRLGIGVATVSFAAMGLAPLMPVPAQLALIALCTVGFDLGFQSTLI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH
AHQTIVYGIDPASRSRLNAVLFVGMFIGMSGGAALGTLLFAQWGWTAVVVMAVATSLVAL
HHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
AVRWWRRA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]