Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238023761

Identifier: 238023761

GI number: 238023761

Start: 340466

End: 340909

Strand: Reverse

Name: 238023761

Synonym: bglu_2g02930

Alternate gene names: NA

Gene position: 340909-340466 (Counterclockwise)

Preceding gene: 238023762

Following gene: 238023760

Centisome position: 12.06

GC content: 72.97

Gene sequence:

>444_bases
ATGACGACCTCCACCGAATCCGATCGCGCGCTCGAAGCCGAGGTCGCGGACCTGACGCTCGCGATCGGCCAGCTCGTGCG
CCGGGTTCGCGCCGAAGTCGATCCGGGCGACTACAACCTGTCCCAGCTGAGCGTGCTGGCGCGCCTCGAGCATCGCAGCC
CGATGACGATCGCCGAGCTGGCACGCGCCGAATCGATGAAGCCGCAGTCGATGGGCACGCTCGTGCATAGCCTCGAACAG
GCCGGCCTGGTGGAGCGCCAGCCGCACCCCACCGACGGCCGCCAGTGGCTGATCGCGCTGACCGAGGCCGGCGCGGCCGA
GCGCCGGCAGCGCCGCAGCGCGAAGCGCGCGTGGCTGCTCGAGGCGATCCGCGAGCTCGGCGTGGAGGAGCGCCGCACGC
TGAGCGCGGTCACGCCGCTGCTGCGCCGGCTCGCCGAGCGCTGA

Upstream 100 bases:

>100_bases
AGGCGCCGGCGCGGGCAGCCCCGTCTGTCCGGCCGCTTACCCACGCCGATCTCAGAAGTTTGTCTTGCAAGTTCAACTTC
TCTTATCTACGATAGCACCC

Downstream 100 bases:

>100_bases
GCCGCGGCGCAGCCCGCATCGCTTCGCATCGATTCGCCGCGCGGCATCCCCTCTCGCGCGCCGCGGCTGCGCGCCCCATG
CGGGCAGCGCGGCCCCGGCT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTTSTESDRALEAEVADLTLAIGQLVRRVRAEVDPGDYNLSQLSVLARLEHRSPMTIAELARAESMKPQSMGTLVHSLEQ
AGLVERQPHPTDGRQWLIALTEAGAAERRQRRSAKRAWLLEAIRELGVEERRTLSAVTPLLRRLAER

Sequences:

>Translated_147_residues
MTTSTESDRALEAEVADLTLAIGQLVRRVRAEVDPGDYNLSQLSVLARLEHRSPMTIAELARAESMKPQSMGTLVHSLEQ
AGLVERQPHPTDGRQWLIALTEAGAAERRQRRSAKRAWLLEAIRELGVEERRTLSAVTPLLRRLAER
>Mature_146_residues
TTSTESDRALEAEVADLTLAIGQLVRRVRAEVDPGDYNLSQLSVLARLEHRSPMTIAELARAESMKPQSMGTLVHSLEQA
GLVERQPHPTDGRQWLIALTEAGAAERRQRRSAKRAWLLEAIRELGVEERRTLSAVTPLLRRLAER

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16458; Mature: 16327

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTESDRALEAEVADLTLAIGQLVRRVRAEVDPGDYNLSQLSVLARLEHRSPMTIAEL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHH
ARAESMKPQSMGTLVHSLEQAGLVERQPHPTDGRQWLIALTEAGAAERRQRRSAKRAWLL
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHHCCHHHHHHHHHHHHHHHH
EAIRELGVEERRTLSAVTPLLRRLAER
HHHHHHCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTSTESDRALEAEVADLTLAIGQLVRRVRAEVDPGDYNLSQLSVLARLEHRSPMTIAEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHH
ARAESMKPQSMGTLVHSLEQAGLVERQPHPTDGRQWLIALTEAGAAERRQRRSAKRAWLL
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHHCCHHHHHHHHHHHHHHHH
EAIRELGVEERRTLSAVTPLLRRLAER
HHHHHHCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]