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The map label for this gene is ywoC [H]

Identifier: 238023760

GI number: 238023760

Start: 339765

End: 340328

Strand: Reverse

Name: ywoC [H]

Synonym: bglu_2g02920

Alternate gene names: 238023760

Gene position: 340328-339765 (Counterclockwise)

Preceding gene: 238023761

Following gene: 238023759

Centisome position: 12.04

GC content: 70.57

Gene sequence:

>564_bases
ATGACCGTCACCACCCTCGATCCGAACACCGCGCTGATCGTCATCGACCTGCAGAAGGGCATCGTCGCCTTGCCCGTCGC
GCATCCGCCCGCCCCCATCGTCGAACGGTCCGTGCGGCTGCTCGATGCGTTCCGCGCACGCGGCCTGCCCGTGGTGCTCG
TCAACGTCGCCGGCGTGGCGCCGGGCCGCAACGAGCAGCCGCGCCGTGGCGGCGAACTGCCGCCCGACTGGGCCGAGCTG
CTGCCGGAACTGAAGCAGCAGCCGGGCGACCTGCTCGTCACCAAGCGCACCTGGTGCGGCTTCACCAACACCGATCTCGA
CGCGAGGCTGAAGGCGGCGGGCGTCACCCAGGTCGTGCTGTGCGGCATCGCCACCAGCATCGGCGTGGAATCGACCGCGC
GCCTCGCCTACCAGCTCGGCTACCACGTCACGCTCGCCATCGACGCGATGACGGACCTGCACGCCGACGCGCACGCCAAC
AGCATCGCGCGGATCTTTCCGCGCCTCGGCGAGACCGGCACCACCGACGACATCATCGCGCTGCTCGAGCAGCGCGACGC
CTGA

Upstream 100 bases:

>100_bases
CGCGCGGCATCCCCTCTCGCGCGCCGCGGCTGCGCGCCCCATGCGGGCAGCGCGGCCCCGGCTCATTCCCGTCAACGGCC
ACCGGCCCAAGGAGCCTTTC

Downstream 100 bases:

>100_bases
CCGGCCGCGCGGCAGCTGCCGGCGTGGTTCGTGCATCGCGCGGCGCCGCGCCGGAACCGCCCGGCGCGATCTCGCGCGCC
GTTCATCAGGCCGGTGTTCG

Product: Isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTVTTLDPNTALIVIDLQKGIVALPVAHPPAPIVERSVRLLDAFRARGLPVVLVNVAGVAPGRNEQPRRGGELPPDWAEL
LPELKQQPGDLLVTKRTWCGFTNTDLDARLKAAGVTQVVLCGIATSIGVESTARLAYQLGYHVTLAIDAMTDLHADAHAN
SIARIFPRLGETGTTDDIIALLEQRDA

Sequences:

>Translated_187_residues
MTVTTLDPNTALIVIDLQKGIVALPVAHPPAPIVERSVRLLDAFRARGLPVVLVNVAGVAPGRNEQPRRGGELPPDWAEL
LPELKQQPGDLLVTKRTWCGFTNTDLDARLKAAGVTQVVLCGIATSIGVESTARLAYQLGYHVTLAIDAMTDLHADAHAN
SIARIFPRLGETGTTDDIIALLEQRDA
>Mature_186_residues
TVTTLDPNTALIVIDLQKGIVALPVAHPPAPIVERSVRLLDAFRARGLPVVLVNVAGVAPGRNEQPRRGGELPPDWAELL
PELKQQPGDLLVTKRTWCGFTNTDLDARLKAAGVTQVVLCGIATSIGVESTARLAYQLGYHVTLAIDAMTDLHADAHANS
IARIFPRLGETGTTDDIIALLEQRDA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=182, Percent_Identity=39.5604395604396, Blast_Score=121, Evalue=2e-29,
Organism=Escherichia coli, GI87081820, Length=177, Percent_Identity=30.5084745762712, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016291
- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20023; Mature: 19892

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTTLDPNTALIVIDLQKGIVALPVAHPPAPIVERSVRLLDAFRARGLPVVLVNVAGVA
CEEEEECCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC
PGRNEQPRRGGELPPDWAELLPELKQQPGDLLVTKRTWCGFTNTDLDARLKAAGVTQVVL
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHH
CGIATSIGVESTARLAYQLGYHVTLAIDAMTDLHADAHANSIARIFPRLGETGTTDDIIA
HHHHHHCCCHHHHHHHHHHCCEEEEEEECHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH
LLEQRDA
HHHHCCC
>Mature Secondary Structure 
TVTTLDPNTALIVIDLQKGIVALPVAHPPAPIVERSVRLLDAFRARGLPVVLVNVAGVA
EEEEECCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC
PGRNEQPRRGGELPPDWAELLPELKQQPGDLLVTKRTWCGFTNTDLDARLKAAGVTQVVL
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCHHHHHH
CGIATSIGVESTARLAYQLGYHVTLAIDAMTDLHADAHANSIARIFPRLGETGTTDDIIA
HHHHHHCCCHHHHHHHHHHCCEEEEEEECHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH
LLEQRDA
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]