| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023758
Identifier: 238023758
GI number: 238023758
Start: 337421
End: 338674
Strand: Reverse
Name: 238023758
Synonym: bglu_2g02900
Alternate gene names: NA
Gene position: 338674-337421 (Counterclockwise)
Preceding gene: 238023759
Following gene: 238023754
Centisome position: 11.98
GC content: 73.37
Gene sequence:
>1254_bases GTGCGCGCCCCACAACGGCGGCCGGGGCTCGTGTATCGTGAGGGCGTACCAGGCCATTCCGGAACATCGATGACCACGAT CGATACAATATCGACGCCCCGCTCCAAGCTGTCCGCCGTCTCCCGCCGCCTCCCTCCGAACCCGACGTACCCGGTGCCGG CCGCCACGCGCCAGCCGCGCGGCGCGCGCGCGGCGCGGGCCGCCCAAGCCCTCGCCGCGGCACTCGCCAGCAGCGCGATA CCGATGGCCTGCCGCGCCGAGAGCGACGGCTTCGGCGAACTCAACGGCCCCGGCCGGATCGCCATCTTCGCGCTCGCCGG CGGCTGGCTGCTGCTGACGCTGTTCCTGTTCACGATGCTGCGGCGGGTACGGCCGCACACGCGCTACGCCGCAAGCGGCC TGTTCCTGGCCGCGCCGTTCCTCTGGCTCGCCGTCACCTATAGCTGGTTCGCGATGACCGAGCCGCGCGAATTCACGCCG TCGGCCACCGCCACCGCGATGCATACCACCGACACGCCGGTGGAGCTGGGCGGCGCGACGTTCCCGGCCGGCAGCCGCGT CGCGATGCTCGCGCCCGACGAGCATGGCGACGCCCCGCAGCCGGCCGCCGTCGAGGCCGATCGCCCGGTCGCGCTCGGCG CGCTGTCGATCCGCGCGATTCATCGCGTGGCCGGCGGCGCCGACGACACCTATGGCGCGCTGCTCGCGTTCGACCAGACC ATCGATGGCTGGCCCTGCGCGGCGATCTCCGACATGGACACGGTGCTGCGCGTGGTGGACCGCCGTGCACCGAAGCCACG CCTCGTCTCGTGCCAGCTCGCCAGGACGGTGACGATCGGCAGCGTCGCATGGCCGCCCGCCACCGTCGTGCGGCGCGGCA GGAAAGGCAGCTGGACGCTGTTCTGGCAGGCCAGCACGTTCTCGCAGGTCGAGCGCGCCAAGGCGTTCTCGTTCGACGTC GATTCGATGTCGGGCGACTACGGCGCGGCGCACCAGCTCCTGTCGTGGAGCGGCACGCTGCACGGTGACGGCGAAGTGAG CGTGGCCGACGTGAGGTTTGGCGGCGATCCCGCGCCGGCGCTCGCCTGGCAGAGCGACGGCGCGATCCGCGTGACGGGGC GCGGCGTGGACGCCAGCGGCGCGCCGGTGAATTGCGTGACGGTCAGGATGACGCGCACCGGGCCGGCGTACCGGCACTGC GCGGCGCCGGCGGCCGACCAGCCGGCATCGGCCGCGCAGGGGGCATCGCGCTGA
Upstream 100 bases:
>100_bases GTGCCGGCGCATCACGGCCGCGCCGGCCCTGGCCGAACAAAAAGCCCGGCGCAGCGCGCTGCCCGCGCGATAACGTTATG AAACCCCGCGCCGCCGCGCG
Downstream 100 bases:
>100_bases GGCTCGACGATGTGCGGCGCGCGCGCGAGGCGCCGGCGCGCGCCGGCAGGCATGGTCAGGCGCTGCGCGGCGGGCGCCCG ATGGCCTGGAGCAGCGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MRAPQRRPGLVYREGVPGHSGTSMTTIDTISTPRSKLSAVSRRLPPNPTYPVPAATRQPRGARAARAAQALAAALASSAI PMACRAESDGFGELNGPGRIAIFALAGGWLLLTLFLFTMLRRVRPHTRYAASGLFLAAPFLWLAVTYSWFAMTEPREFTP SATATAMHTTDTPVELGGATFPAGSRVAMLAPDEHGDAPQPAAVEADRPVALGALSIRAIHRVAGGADDTYGALLAFDQT IDGWPCAAISDMDTVLRVVDRRAPKPRLVSCQLARTVTIGSVAWPPATVVRRGRKGSWTLFWQASTFSQVERAKAFSFDV DSMSGDYGAAHQLLSWSGTLHGDGEVSVADVRFGGDPAPALAWQSDGAIRVTGRGVDASGAPVNCVTVRMTRTGPAYRHC AAPAADQPASAAQGASR
Sequences:
>Translated_417_residues MRAPQRRPGLVYREGVPGHSGTSMTTIDTISTPRSKLSAVSRRLPPNPTYPVPAATRQPRGARAARAAQALAAALASSAI PMACRAESDGFGELNGPGRIAIFALAGGWLLLTLFLFTMLRRVRPHTRYAASGLFLAAPFLWLAVTYSWFAMTEPREFTP SATATAMHTTDTPVELGGATFPAGSRVAMLAPDEHGDAPQPAAVEADRPVALGALSIRAIHRVAGGADDTYGALLAFDQT IDGWPCAAISDMDTVLRVVDRRAPKPRLVSCQLARTVTIGSVAWPPATVVRRGRKGSWTLFWQASTFSQVERAKAFSFDV DSMSGDYGAAHQLLSWSGTLHGDGEVSVADVRFGGDPAPALAWQSDGAIRVTGRGVDASGAPVNCVTVRMTRTGPAYRHC AAPAADQPASAAQGASR >Mature_417_residues MRAPQRRPGLVYREGVPGHSGTSMTTIDTISTPRSKLSAVSRRLPPNPTYPVPAATRQPRGARAARAAQALAAALASSAI PMACRAESDGFGELNGPGRIAIFALAGGWLLLTLFLFTMLRRVRPHTRYAASGLFLAAPFLWLAVTYSWFAMTEPREFTP SATATAMHTTDTPVELGGATFPAGSRVAMLAPDEHGDAPQPAAVEADRPVALGALSIRAIHRVAGGADDTYGALLAFDQT IDGWPCAAISDMDTVLRVVDRRAPKPRLVSCQLARTVTIGSVAWPPATVVRRGRKGSWTLFWQASTFSQVERAKAFSFDV DSMSGDYGAAHQLLSWSGTLHGDGEVSVADVRFGGDPAPALAWQSDGAIRVTGRGVDASGAPVNCVTVRMTRTGPAYRHC AAPAADQPASAAQGASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43957; Mature: 43957
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPQRRPGLVYREGVPGHSGTSMTTIDTISTPRSKLSAVSRRLPPNPTYPVPAATRQPR CCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC GARAARAAQALAAALASSAIPMACRAESDGFGELNGPGRIAIFALAGGWLLLTLFLFTML CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH RRVRPHTRYAASGLFLAAPFLWLAVTYSWFAMTEPREFTPSATATAMHTTDTPVELGGAT HHHCCCHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCCCCCEE FPAGSRVAMLAPDEHGDAPQPAAVEADRPVALGALSIRAIHRVAGGADDTYGALLAFDQT CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEEECCC IDGWPCAAISDMDTVLRVVDRRAPKPRLVSCQLARTVTIGSVAWPPATVVRRGRKGSWTL CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCHHHHHCCCCCCEEE FWQASTFSQVERAKAFSFDVDSMSGDYGAAHQLLSWSGTLHGDGEVSVADVRFGGDPAPA EEECCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCEECCCCCEEEEEEEECCCCCCC LAWQSDGAIRVTGRGVDASGAPVNCVTVRMTRTGPAYRHCAAPAADQPASAAQGASR EEECCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCHHHCCCCC >Mature Secondary Structure MRAPQRRPGLVYREGVPGHSGTSMTTIDTISTPRSKLSAVSRRLPPNPTYPVPAATRQPR CCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC GARAARAAQALAAALASSAIPMACRAESDGFGELNGPGRIAIFALAGGWLLLTLFLFTML CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH RRVRPHTRYAASGLFLAAPFLWLAVTYSWFAMTEPREFTPSATATAMHTTDTPVELGGAT HHHCCCHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCCCCCEE FPAGSRVAMLAPDEHGDAPQPAAVEADRPVALGALSIRAIHRVAGGADDTYGALLAFDQT CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEEECCC IDGWPCAAISDMDTVLRVVDRRAPKPRLVSCQLARTVTIGSVAWPPATVVRRGRKGSWTL CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCHHHHHCCCCCCEEE FWQASTFSQVERAKAFSFDVDSMSGDYGAAHQLLSWSGTLHGDGEVSVADVRFGGDPAPA EEECCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCEECCCCCEEEEEEEECCCCCCC LAWQSDGAIRVTGRGVDASGAPVNCVTVRMTRTGPAYRHCAAPAADQPASAAQGASR EEECCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA