| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023715
Identifier: 238023715
GI number: 238023715
Start: 283713
End: 284759
Strand: Direct
Name: 238023715
Synonym: bglu_2g02430
Alternate gene names: NA
Gene position: 283713-284759 (Clockwise)
Preceding gene: 238023714
Following gene: 238023716
Centisome position: 10.03
GC content: 75.74
Gene sequence:
>1047_bases ATGGCTATTTGGTTGAGCCGTCCGCGGGACGCCCATCACCCGCACGACCCGAGCGTGATGCCGGCCCGCCTGGGCGCGGC CGCCGACGTGCTGCCGCGCGAGACGTTCGGCACGCTGGTGTCGCTCGAGGACGCCTACGCGGCGCTCGCCGCCGATCGCG CCGCGCTGATCGAGGCCGCCCGCGACGAGGCCGAGCGGATCGTCGACGCGGGCCGCGAGCAGGCCGGCGAGATCCTCGAC GCGGCCCAGCGCGAGCGCGACGCCGCCGCGCGCGCCGGCTATCGCGACGGCTACGACCGCGCGCTCGGCGACTGGATGGA CCGGCTCGCCGACGTCGCGCACGCGCAGAACCAGCTGCAGGTGCGCATGCGCGAGCGGCTCGCCGACATCGTCGCCTCGG CCGTGGAGCAGATCGTGCGCACCGAGAACCGCGCGGCGCTGTTCGAGCGCGCGCTGGCCTCGGTCGAGCGGATCGTGGAC GGCGCGACCTATCTGCGCGTGGCCGTGCATCCCGACGATCTCGACAGCGCCAAGGACACCTTCGACCGGCTCGCCACGCG CTGGCGCGAGCTGGGCCGGCCGATCCCGATGTCGGTGGTGGGCGACAAGCGGCTCGCGCCCGGCAGCTGCGTCTGCGAAT CCGATTTCGGCGCCGTGGACGCGAGCCTCGACACCCAGCTGCGCGCGATGCACGGCGCGGTGTCGCGCGCGCTCAAGCGC ACGCTGGCCGAGATCGAGTCGGCCGCGCCGGACGAGGGCGCGCCCGGCGCCGATCCGCGGGGCGGTGCGGGCGGTGCGGG CGGCGCGCCTGCGGCCGTCGGCGACGATCCCTATGCGGCAGCGGACGGCCCGGCCCGGGGCGACGCGGATCCGTATGCGA GCCCGGATGCCGATCCGTATGCGGCGCAGGGCTATCTGCCCGACGAACGCCACCGCGCTCCGCAGCCGAGCACGCAGGGC TATCTGCCCGACGAGCGCCACCGCGACCCGCAGCCGGCCCAGGGCGATCCCTGCGCCACGTCTGCCCAGGCCGGAGGCGG CCGATGA
Upstream 100 bases:
>100_bases CGCTAGCGCCGCCGGCCTCGCTGCCGGCCGCGAGCGGCCTGGATGCGGCCGGTTCCGTGCGGCTGTTCGCGCGGATGCCC GAACTGATGCCGGAGGTGGC
Downstream 100 bases:
>100_bases ACCTGTCCTGGCTGTCGCGCACCGACGATTTCGAGCGGCTGACCGACGCGATCGAGCGCGAGATCCTCGCCGTGCCCGCC GTGGCGCGCACCGGCAAGGT
Product: type III secretion system protein HrpB
Products: NA
Alternate protein names: Type III Secretion System Protein HrpB; Type III Secretion Apparatus Protein HrpE/YscL Family; TypeIII Secretion Cytoplasmic Protein SctL; Flagellar Biosynthesis/Type III Secretory Pathway Protein
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAIWLSRPRDAHHPHDPSVMPARLGAAADVLPRETFGTLVSLEDAYAALAADRAALIEAARDEAERIVDAGREQAGEILD AAQRERDAAARAGYRDGYDRALGDWMDRLADVAHAQNQLQVRMRERLADIVASAVEQIVRTENRAALFERALASVERIVD GATYLRVAVHPDDLDSAKDTFDRLATRWRELGRPIPMSVVGDKRLAPGSCVCESDFGAVDASLDTQLRAMHGAVSRALKR TLAEIESAAPDEGAPGADPRGGAGGAGGAPAAVGDDPYAAADGPARGDADPYASPDADPYAAQGYLPDERHRAPQPSTQG YLPDERHRDPQPAQGDPCATSAQAGGGR
Sequences:
>Translated_348_residues MAIWLSRPRDAHHPHDPSVMPARLGAAADVLPRETFGTLVSLEDAYAALAADRAALIEAARDEAERIVDAGREQAGEILD AAQRERDAAARAGYRDGYDRALGDWMDRLADVAHAQNQLQVRMRERLADIVASAVEQIVRTENRAALFERALASVERIVD GATYLRVAVHPDDLDSAKDTFDRLATRWRELGRPIPMSVVGDKRLAPGSCVCESDFGAVDASLDTQLRAMHGAVSRALKR TLAEIESAAPDEGAPGADPRGGAGGAGGAPAAVGDDPYAAADGPARGDADPYASPDADPYAAQGYLPDERHRAPQPSTQG YLPDERHRDPQPAQGDPCATSAQAGGGR >Mature_347_residues AIWLSRPRDAHHPHDPSVMPARLGAAADVLPRETFGTLVSLEDAYAALAADRAALIEAARDEAERIVDAGREQAGEILDA AQRERDAAARAGYRDGYDRALGDWMDRLADVAHAQNQLQVRMRERLADIVASAVEQIVRTENRAALFERALASVERIVDG ATYLRVAVHPDDLDSAKDTFDRLATRWRELGRPIPMSVVGDKRLAPGSCVCESDFGAVDASLDTQLRAMHGAVSRALKRT LAEIESAAPDEGAPGADPRGGAGGAGGAPAAVGDDPYAAADGPARGDADPYASPDADPYAAQGYLPDERHRAPQPSTQGY LPDERHRDPQPAQGDPCATSAQAGGGR
Specific function: Unknown
COG id: COG1317
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36933; Mature: 36802
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIWLSRPRDAHHPHDPSVMPARLGAAADVLPRETFGTLVSLEDAYAALAADRAALIEAA CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDEAERIVDAGREQAGEILDAAQRERDAAARAGYRDGYDRALGDWMDRLADVAHAQNQLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VRMRERLADIVASAVEQIVRTENRAALFERALASVERIVDGATYLRVAVHPDDLDSAKDT HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH FDRLATRWRELGRPIPMSVVGDKRLAPGSCVCESDFGAVDASLDTQLRAMHGAVSRALKR HHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TLAEIESAAPDEGAPGADPRGGAGGAGGAPAAVGDDPYAAADGPARGDADPYASPDADPY HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAQGYLPDERHRAPQPSTQGYLPDERHRDPQPAQGDPCATSAQAGGGR CCCCCCCHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AIWLSRPRDAHHPHDPSVMPARLGAAADVLPRETFGTLVSLEDAYAALAADRAALIEAA CEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDEAERIVDAGREQAGEILDAAQRERDAAARAGYRDGYDRALGDWMDRLADVAHAQNQLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VRMRERLADIVASAVEQIVRTENRAALFERALASVERIVDGATYLRVAVHPDDLDSAKDT HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH FDRLATRWRELGRPIPMSVVGDKRLAPGSCVCESDFGAVDASLDTQLRAMHGAVSRALKR HHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHH TLAEIESAAPDEGAPGADPRGGAGGAGGAPAAVGDDPYAAADGPARGDADPYASPDADPY HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAQGYLPDERHRAPQPSTQGYLPDERHRDPQPAQGDPCATSAQAGGGR CCCCCCCHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA