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The map label for this gene is hrpB6 [H]

Identifier: 238023716

GI number: 238023716

Start: 284756

End: 286108

Strand: Direct

Name: hrpB6 [H]

Synonym: bglu_2g02440

Alternate gene names: 238023716

Gene position: 284756-286108 (Clockwise)

Preceding gene: 238023715

Following gene: 238023717

Centisome position: 10.07

GC content: 71.25

Gene sequence:

>1353_bases
ATGAACCTGTCCTGGCTGTCGCGCACCGACGATTTCGAGCGGCTGACCGACGCGATCGAGCGCGAGATCCTCGCCGTGCC
CGCCGTGGCGCGCACCGGCAAGGTCATGGAAGTGGTCGGCACGGTGATCAAGGTGTCCGGCCTCGACGTCACGCTCGGCG
AACTCTGCGAGCTGCGCGCGCCCGACGGCACGCTGCTGCAGCGCGCCGAGGTGGTGGGCTTCACGCGCGACGTGGCGCTG
CTCTCGCCGTTCTCGCGGCTCGAGAACGTGTCGCGCGCCACCCAGGTGATCGGCCTCGGCCGGCCGCTGTCGATCCAGGT
CGGCGACCAGTTGCTCGGCCGCGTGCTCGACGGCCTCGGCGAGCCGATCGACGGCGGCCCGCCGCTCGACTCCGACGACT
GGCGCCCGGTGATCGTGCAGCCGCCCGACCCGATGAAGCGGCGCATGGTGGACACGCCGATGCCCACCGGCGTGCGCGTG
GTCGATGCCATGATGACGCTCGGCGAAGGGCAGCGGATGGGCATCTTCGCGCCGGCCGGCGTCGGCAAGTCGACGCTGAT
GGGCATGTTCGCGCGCGGCGCGGCCTGCGACATCAACGTGATCGCGCTGATCGGCGAACGGGGCCGCGAAGTGCGCGAAT
TCATCGAGCTGATCCTCGGCCCGGAGGGCATGGCGCGTTCGGTGGTGGTGTGCGCGACCTCGGACCGTTCGTCGATGGAG
CGCGCCAAGGCCGCGCACACGGCCACCGCGATCGCCGAATACTTCCGCGACCGCGGCCTGCGCGTGCTGCTGATGATGGA
TTCGCTGACGCGTTTCGCGCGTGCCGGCCGCGAGATCGGCCTGGCCGCGGGCGAGCCGCCGGCGCGGCGCGGCTTCCCGC
CCTCGGTGTTCGCCGAGCTGCCGCGCCTGCTGGAGCGCACCGGCATGGGCGCGACCGGCTCGATCACGGCGCTCTACACG
GTGCTGGCCGAGGACGAGACGGGCGGCGACCCGGTGGCCGAGGAAGTGCGAGGCATCCTGGACGGCCACATGATCCTGTC
GCGCGAGATCGCGGCGAAGAACCAGTATCCGGCGATCGACGTGCTCGGCAGCCTGTCGCGCGTGATGTCGCTGGTGGTGC
CCGATGCGCACGCGCGCGCGGCCTCGCGGATTCGCGAGCTGATGGCCAAGCATCGCGAGGTGGAGGTGCTGCTGCAGGTG
GGCGAATACCAGCCCGGCCAGAACCCGCTCGCCGACGAGGCGATCCAGAAGGCCGACGCGATCCGCGCGTTCCTCTGCCA
GCGCACCCGCGACTACGCGCCCTACGACGAAACCGGCGCGTATCTGCACGAACTGTCCGGGGTGAGCGCATGA

Upstream 100 bases:

>100_bases
AGCCGAGCACGCAGGGCTATCTGCCCGACGAGCGCCACCGCGACCCGCAGCCGGCCCAGGGCGATCCCTGCGCCACGTCT
GCCCAGGCCGGAGGCGGCCG

Downstream 100 bases:

>100_bases
GCGCCGACGCACGCCTGGCACGCGACCGCCGCGCGATCGCGCTGAACCGCGCGAGCGAGCGCCGCCGCAAGCAGAACGAC
GCGCTGCGCGCGCAGCTCGT

Product: type III secretion system ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MNLSWLSRTDDFERLTDAIEREILAVPAVARTGKVMEVVGTVIKVSGLDVTLGELCELRAPDGTLLQRAEVVGFTRDVAL
LSPFSRLENVSRATQVIGLGRPLSIQVGDQLLGRVLDGLGEPIDGGPPLDSDDWRPVIVQPPDPMKRRMVDTPMPTGVRV
VDAMMTLGEGQRMGIFAPAGVGKSTLMGMFARGAACDINVIALIGERGREVREFIELILGPEGMARSVVVCATSDRSSME
RAKAAHTATAIAEYFRDRGLRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTGMGATGSITALYT
VLAEDETGGDPVAEEVRGILDGHMILSREIAAKNQYPAIDVLGSLSRVMSLVVPDAHARAASRIRELMAKHREVEVLLQV
GEYQPGQNPLADEAIQKADAIRAFLCQRTRDYAPYDETGAYLHELSGVSA

Sequences:

>Translated_450_residues
MNLSWLSRTDDFERLTDAIEREILAVPAVARTGKVMEVVGTVIKVSGLDVTLGELCELRAPDGTLLQRAEVVGFTRDVAL
LSPFSRLENVSRATQVIGLGRPLSIQVGDQLLGRVLDGLGEPIDGGPPLDSDDWRPVIVQPPDPMKRRMVDTPMPTGVRV
VDAMMTLGEGQRMGIFAPAGVGKSTLMGMFARGAACDINVIALIGERGREVREFIELILGPEGMARSVVVCATSDRSSME
RAKAAHTATAIAEYFRDRGLRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTGMGATGSITALYT
VLAEDETGGDPVAEEVRGILDGHMILSREIAAKNQYPAIDVLGSLSRVMSLVVPDAHARAASRIRELMAKHREVEVLLQV
GEYQPGQNPLADEAIQKADAIRAFLCQRTRDYAPYDETGAYLHELSGVSA
>Mature_450_residues
MNLSWLSRTDDFERLTDAIEREILAVPAVARTGKVMEVVGTVIKVSGLDVTLGELCELRAPDGTLLQRAEVVGFTRDVAL
LSPFSRLENVSRATQVIGLGRPLSIQVGDQLLGRVLDGLGEPIDGGPPLDSDDWRPVIVQPPDPMKRRMVDTPMPTGVRV
VDAMMTLGEGQRMGIFAPAGVGKSTLMGMFARGAACDINVIALIGERGREVREFIELILGPEGMARSVVVCATSDRSSME
RAKAAHTATAIAEYFRDRGLRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTGMGATGSITALYT
VLAEDETGGDPVAEEVRGILDGHMILSREIAAKNQYPAIDVLGSLSRVMSLVVPDAHARAASRIRELMAKHREVEVLLQV
GEYQPGQNPLADEAIQKADAIRAFLCQRTRDYAPYDETGAYLHELSGVSA

Specific function: Necessary for both basic pathogenicity and the induction of the hypersensitive response in resistant plants. May function as an ATPase that is related to a transport apparatus rather than as part of a proton pump [H]

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=418, Percent_Identity=29.6650717703349, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI50345984, Length=316, Percent_Identity=31.0126582278481, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI4757810, Length=316, Percent_Identity=31.0126582278481, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI19913428, Length=415, Percent_Identity=24.8192771084337, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI19913426, Length=439, Percent_Identity=25.5125284738041, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI19913424, Length=327, Percent_Identity=27.5229357798165, Blast_Score=105, Evalue=8e-23,
Organism=Escherichia coli, GI1788251, Length=433, Percent_Identity=43.64896073903, Blast_Score=328, Evalue=4e-91,
Organism=Escherichia coli, GI1790172, Length=391, Percent_Identity=30.690537084399, Blast_Score=148, Evalue=8e-37,
Organism=Escherichia coli, GI1790170, Length=414, Percent_Identity=28.743961352657, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1790217, Length=249, Percent_Identity=28.1124497991968, Blast_Score=69, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI25144756, Length=354, Percent_Identity=29.9435028248588, Blast_Score=142, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI71988063, Length=317, Percent_Identity=31.8611987381703, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI71988080, Length=317, Percent_Identity=31.8611987381703, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17510931, Length=370, Percent_Identity=25.4054054054054, Blast_Score=121, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI17570191, Length=403, Percent_Identity=23.3250620347395, Blast_Score=118, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI71988074, Length=298, Percent_Identity=30.5369127516779, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17565854, Length=248, Percent_Identity=32.258064516129, Blast_Score=111, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6322581, Length=416, Percent_Identity=30.7692307692308, Blast_Score=166, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6319370, Length=319, Percent_Identity=33.2288401253918, Blast_Score=149, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6319603, Length=345, Percent_Identity=27.8260869565217, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6320016, Length=262, Percent_Identity=28.6259541984733, Blast_Score=90, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24638766, Length=416, Percent_Identity=28.8461538461538, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI24658560, Length=406, Percent_Identity=29.064039408867, Blast_Score=141, Evalue=7e-34,
Organism=Drosophila melanogaster, GI28574560, Length=354, Percent_Identity=28.8135593220339, Blast_Score=131, Evalue=1e-30,
Organism=Drosophila melanogaster, GI281361666, Length=373, Percent_Identity=25.201072386059, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24646341, Length=373, Percent_Identity=25.201072386059, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI17136796, Length=373, Percent_Identity=25.201072386059, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24583992, Length=326, Percent_Identity=26.6871165644172, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24583988, Length=248, Percent_Identity=30.241935483871, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24583986, Length=248, Percent_Identity=30.241935483871, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24583984, Length=248, Percent_Identity=30.241935483871, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI20129479, Length=235, Percent_Identity=29.3617021276596, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR004100
- InterPro:   IPR005714
- InterPro:   IPR013380 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 48621; Mature: 48621

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSWLSRTDDFERLTDAIEREILAVPAVARTGKVMEVVGTVIKVSGLDVTLGELCELRA
CCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHCCCCEEHHHHHHCCC
PDGTLLQRAEVVGFTRDVALLSPFSRLENVSRATQVIGLGRPLSIQVGDQLLGRVLDGLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCC
EPIDGGPPLDSDDWRPVIVQPPDPMKRRMVDTPMPTGVRVVDAMMTLGEGQRMGIFAPAG
CCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
VGKSTLMGMFARGAACDINVIALIGERGREVREFIELILGPEGMARSVVVCATSDRSSME
CCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH
RAKAAHTATAIAEYFRDRGLRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAEL
HHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
PRLLERTGMGATGSITALYTVLAEDETGGDPVAEEVRGILDGHMILSREIAAKNQYPAID
HHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VLGSLSRVMSLVVPDAHARAASRIRELMAKHREVEVLLQVGEYQPGQNPLADEAIQKADA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
IRAFLCQRTRDYAPYDETGAYLHELSGVSA
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MNLSWLSRTDDFERLTDAIEREILAVPAVARTGKVMEVVGTVIKVSGLDVTLGELCELRA
CCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHCCCCEEHHHHHHCCC
PDGTLLQRAEVVGFTRDVALLSPFSRLENVSRATQVIGLGRPLSIQVGDQLLGRVLDGLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCC
EPIDGGPPLDSDDWRPVIVQPPDPMKRRMVDTPMPTGVRVVDAMMTLGEGQRMGIFAPAG
CCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC
VGKSTLMGMFARGAACDINVIALIGERGREVREFIELILGPEGMARSVVVCATSDRSSME
CCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH
RAKAAHTATAIAEYFRDRGLRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAEL
HHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
PRLLERTGMGATGSITALYTVLAEDETGGDPVAEEVRGILDGHMILSREIAAKNQYPAID
HHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VLGSLSRVMSLVVPDAHARAASRIRELMAKHREVEVLLQVGEYQPGQNPLADEAIQKADA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
IRAFLCQRTRDYAPYDETGAYLHELSGVSA
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]