| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023681
Identifier: 238023681
GI number: 238023681
Start: 236654
End: 237772
Strand: Direct
Name: 238023681
Synonym: bglu_2g02040
Alternate gene names: NA
Gene position: 236654-237772 (Clockwise)
Preceding gene: 238023678
Following gene: 238023686
Centisome position: 8.37
GC content: 67.74
Gene sequence:
>1119_bases ATGGCAGCGGTGGCAAACGAGACTCCGTTTCGCGGGGCCGATCGCGATTCGGTCAATGAAATTCAGGTCGACGAAGCGCT CGCCTCGGTGCTGACGCTGCCGCTCGATTCCGCGGTGGCGGCGCTGTGCGCGGAGCCGGAACTCGACGCGTGGTTCGAAG CGGCACCGGGCCGGAGCGAGGCATTCCTCGCGAAGCTGCGCGAGACGGTGGCGCGCGCGTTCGGCGCACGCGAGGCGGCG GCGCTGGCCGAGGTCCACGCGGCGCTGTTCACGCTGTACGACCTGCACGTCGCGGACGGTACCGATGCGCGTGCGCTCAA TCAGTTCAATCCGCTTCTCACGCAGGCGCGCCGCGTGATCGAACGCGCCTGGCTCGCCAGCGAGCGCGAGCGGGTGTCGG TCCAGACCGGCGTGACCGACAGCGCGGCGGTGGTGAGCGCGTTGAAGGGGATCTGGTCCGGGCATCGCGCCGCATCGCAT CCGCTGTTCGATTTCCTCGAGAAGGACGCCACGCGCGAGCAGATCGTCACGTTCTTCCGCAGCGACAGCGCGCTGAACAT CCGCTTCTTCGACCTGCTGCTGTATTCGCTGATCGGCTCGCGCGTCGAGGTGCGCAAGGAGCTGATGCAGAACCTGTGGG ACGAAGCGGGCCGCGGCAACCCGAGCCTGAGCCACGTCAGCCTGTTCCGCCGCCTGCTCGACGTGGTGGGCGTGGGCCAG GCACCCGACAGCCATGCAAGCCAGCTCGAGGTGGACGGCCATGCCGGCTACAACCTGTTCATGCTGACGAGCCTGAACCG CGCGCACTATTTCATGCTGCTCGGCGTGATGGCGATGACGGAGTTGCTCGACCCGTCGCAGTACGAAAAGCTCGTGCGCG GCTGCAAGCGCGTGGGTTTCGGCGCGAACGGCGAGCTCGCCTACTACGAGGAGCACGTGACGATCGACATCGTGCACGCG CAAGGGTGGCTGGACGACGTGATCGTGCCGGTGGTGCAGCAGACGCCGTCGGTGGGCGACGACATCCTGTTCGGTGCCGC GCTGCGCATGGCGACCTGCGAGGCCTATTACGACGCGCTCTACGCGAAGCTGACCGCGCTGCCGGCCGGCCGCGCGTAA
Upstream 100 bases:
>100_bases TCGATTATGTAGAATGCCGGCAAGTGTGTTGACGGATTCGGCGATGGGCGCCGCCGGACGCACTTCACAACAAAATAGTC AGGACAACATGCGACACGAA
Downstream 100 bases:
>100_bases GCCGCTTGGACATGCCGTCAGCCGCGCGGCTGAAGGTGTCGGGCTTCAGGCCGCGGCGGCCTCGCGCTCGGCCGGCGCGC GGCGATAGGCGGCGAGCAGG
Product: putative ABC-type spermidine/putrescine transport protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MAAVANETPFRGADRDSVNEIQVDEALASVLTLPLDSAVAALCAEPELDAWFEAAPGRSEAFLAKLRETVARAFGAREAA ALAEVHAALFTLYDLHVADGTDARALNQFNPLLTQARRVIERAWLASERERVSVQTGVTDSAAVVSALKGIWSGHRAASH PLFDFLEKDATREQIVTFFRSDSALNIRFFDLLLYSLIGSRVEVRKELMQNLWDEAGRGNPSLSHVSLFRRLLDVVGVGQ APDSHASQLEVDGHAGYNLFMLTSLNRAHYFMLLGVMAMTELLDPSQYEKLVRGCKRVGFGANGELAYYEEHVTIDIVHA QGWLDDVIVPVVQQTPSVGDDILFGAALRMATCEAYYDALYAKLTALPAGRA
Sequences:
>Translated_372_residues MAAVANETPFRGADRDSVNEIQVDEALASVLTLPLDSAVAALCAEPELDAWFEAAPGRSEAFLAKLRETVARAFGAREAA ALAEVHAALFTLYDLHVADGTDARALNQFNPLLTQARRVIERAWLASERERVSVQTGVTDSAAVVSALKGIWSGHRAASH PLFDFLEKDATREQIVTFFRSDSALNIRFFDLLLYSLIGSRVEVRKELMQNLWDEAGRGNPSLSHVSLFRRLLDVVGVGQ APDSHASQLEVDGHAGYNLFMLTSLNRAHYFMLLGVMAMTELLDPSQYEKLVRGCKRVGFGANGELAYYEEHVTIDIVHA QGWLDDVIVPVVQQTPSVGDDILFGAALRMATCEAYYDALYAKLTALPAGRA >Mature_371_residues AAVANETPFRGADRDSVNEIQVDEALASVLTLPLDSAVAALCAEPELDAWFEAAPGRSEAFLAKLRETVARAFGAREAAA LAEVHAALFTLYDLHVADGTDARALNQFNPLLTQARRVIERAWLASERERVSVQTGVTDSAAVVSALKGIWSGHRAASHP LFDFLEKDATREQIVTFFRSDSALNIRFFDLLLYSLIGSRVEVRKELMQNLWDEAGRGNPSLSHVSLFRRLLDVVGVGQA PDSHASQLEVDGHAGYNLFMLTSLNRAHYFMLLGVMAMTELLDPSQYEKLVRGCKRVGFGANGELAYYEEHVTIDIVHAQ GWLDDVIVPVVQQTPSVGDDILFGAALRMATCEAYYDALYAKLTALPAGRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40739; Mature: 40607
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVANETPFRGADRDSVNEIQVDEALASVLTLPLDSAVAALCAEPELDAWFEAAPGRSE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCCCCHH AFLAKLRETVARAFGAREAAALAEVHAALFTLYDLHVADGTDARALNQFNPLLTQARRVI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH ERAWLASERERVSVQTGVTDSAAVVSALKGIWSGHRAASHPLFDFLEKDATREQIVTFFR HHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHH SDSALNIRFFDLLLYSLIGSRVEVRKELMQNLWDEAGRGNPSLSHVSLFRRLLDVVGVGQ CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC APDSHASQLEVDGHAGYNLFMLTSLNRAHYFMLLGVMAMTELLDPSQYEKLVRGCKRVGF CCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC GANGELAYYEEHVTIDIVHAQGWLDDVIVPVVQQTPSVGDDILFGAALRMATCEAYYDAL CCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YAKLTALPAGRA HHHHHHCCCCCC >Mature Secondary Structure AAVANETPFRGADRDSVNEIQVDEALASVLTLPLDSAVAALCAEPELDAWFEAAPGRSE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHCCCCCHH AFLAKLRETVARAFGAREAAALAEVHAALFTLYDLHVADGTDARALNQFNPLLTQARRVI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH ERAWLASERERVSVQTGVTDSAAVVSALKGIWSGHRAASHPLFDFLEKDATREQIVTFFR HHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHH SDSALNIRFFDLLLYSLIGSRVEVRKELMQNLWDEAGRGNPSLSHVSLFRRLLDVVGVGQ CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC APDSHASQLEVDGHAGYNLFMLTSLNRAHYFMLLGVMAMTELLDPSQYEKLVRGCKRVGF CCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC GANGELAYYEEHVTIDIVHAQGWLDDVIVPVVQQTPSVGDDILFGAALRMATCEAYYDAL CCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YAKLTALPAGRA HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA