| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is exuT [H]
Identifier: 238023667
GI number: 238023667
Start: 215068
End: 216378
Strand: Reverse
Name: exuT [H]
Synonym: bglu_2g01880
Alternate gene names: 238023667
Gene position: 216378-215068 (Counterclockwise)
Preceding gene: 238023668
Following gene: 238023666
Centisome position: 7.65
GC content: 69.79
Gene sequence:
>1311_bases ATGAAGCAACGCACCATGGGCTGGATAACGGTGTTCCTGTTATTCCTCGTCTACGGCATCAACTACCTGGACCGCGTGGC GCTGTCGCTCACCGCGCCGATGATCCAGCAGGACCTCGGCATCGATGCGGCGCAGATGGGCATCGTGTTCAGCAGCTTCT TCGTCGGCTACGCGCTGTTCAACTTCGTGGGCGGGCTGGCCAGCGACCGGCTCGGGCCAAAGCTCGTCTACGTGCTGGCC GTCGCGCTCTGGTCGCTGTTCTGCGGACTGACGGCCGTGACTATCGGCTTCGCGAGCCTGCTGCTGGTACGCGTGCTGTT CGGCATGGCCGAGGGGCCGCTCTGCGCCGGCGCCAACAAAATGGTCAACAACTGGATGCCGCGCGAGCGCGCCGCCACCG CGATGGGGCTGTTGAGCGCCGGCTCGCCGCTCGGCGGCGCGCTGGCCGGCCCGGTGGTGGGCCTGCTCGCGGCCAGCTTC GGCTGGCGGCCGGCGTTCTGGATCATCTGCGCGATCGGGCTCGTGTGGGTGGTGGTATGGATCGCCCTGACCGCCGACGA ACCGGCCAGCAGCCGGCTCGTGGCGGCTGCAGAGGCGCAGCCGGCGGGCGCCGGCGTCGCCCGCGCCGCGCACGCGGCGT TCGGCGCAGAGGCCGCGCAGCTGTCGCTGTGGGCCTGGGTCCGCCAGCCGCTCATCATCGCGGCCGCGTTCGCATTCTTC AGCTACAACTACGTGCTGTTCTTCTTCCTGAGCTGGTTCCCGAGCTACCTCGTGCAGGCCCATCACCTGAACCTGAAGGA GATGAGCCTCGCCACCGTGGTGCCCTGGCTGGTGGGCACGGTCGGGCTTGCCGCGGGCGGCGCGATCTCCGATGCGATCT TCCGCTGGACCGGCAGGCTCATGCTGTCGCGCAAGATCGTGCTGGTGGTGGCGCTGGTCGGCACCGGGCTCTGCGTCGGG GTGGCCGGCATCGTGCATACGGCAGCGAGCGCGGTGGCGCTGATGTCGGTGGCGCTGTTCCTGCTTTACGTGACGGGCGC GCTGTACTGGGCCGTGGTGCAGGACGTCGTGCACCCGGCGAAGGTAGGCGGCGTGAGCGGCTGCCTGCATTGCCTGGGCA GCCTCTCCGGCGTGATCGGGCCGGCCGTGACCGGCCTGCTGGTGCAGCGCAGCGGCTCGTTCGCCACGGCGTTCCTGCTG GCGGGCGGCGTGGCGCTGGCGGGCGCGGTGCTGTCGGGGATCTTCATTCGCGAGCCGCGCGCACGCGACGCGATTCACGG AAGGCTGCTGCGCGAGCATGCCGGGCATTGA
Upstream 100 bases:
>100_bases GCGGCGCCCGGCCCGCGGGCCGGCGCCGCCTGCCCCGGCACGCGCGACACCGGGGACGGCCCGCCGGCCGGACGCGCGAC CACGCATCAGGAGACAAGGC
Downstream 100 bases:
>100_bases GCAAAAGGCGCGCGACGGCAAGGCAGGGCTTTGGAGCAGGCGCTCACCGAGCACTACGGCGAAAATCGCAGGATGGCGAT CTCGCCTGGGCAAGCGATCG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MKQRTMGWITVFLLFLVYGINYLDRVALSLTAPMIQQDLGIDAAQMGIVFSSFFVGYALFNFVGGLASDRLGPKLVYVLA VALWSLFCGLTAVTIGFASLLLVRVLFGMAEGPLCAGANKMVNNWMPRERAATAMGLLSAGSPLGGALAGPVVGLLAASF GWRPAFWIICAIGLVWVVVWIALTADEPASSRLVAAAEAQPAGAGVARAAHAAFGAEAAQLSLWAWVRQPLIIAAAFAFF SYNYVLFFFLSWFPSYLVQAHHLNLKEMSLATVVPWLVGTVGLAAGGAISDAIFRWTGRLMLSRKIVLVVALVGTGLCVG VAGIVHTAASAVALMSVALFLLYVTGALYWAVVQDVVHPAKVGGVSGCLHCLGSLSGVIGPAVTGLLVQRSGSFATAFLL AGGVALAGAVLSGIFIREPRARDAIHGRLLREHAGH
Sequences:
>Translated_436_residues MKQRTMGWITVFLLFLVYGINYLDRVALSLTAPMIQQDLGIDAAQMGIVFSSFFVGYALFNFVGGLASDRLGPKLVYVLA VALWSLFCGLTAVTIGFASLLLVRVLFGMAEGPLCAGANKMVNNWMPRERAATAMGLLSAGSPLGGALAGPVVGLLAASF GWRPAFWIICAIGLVWVVVWIALTADEPASSRLVAAAEAQPAGAGVARAAHAAFGAEAAQLSLWAWVRQPLIIAAAFAFF SYNYVLFFFLSWFPSYLVQAHHLNLKEMSLATVVPWLVGTVGLAAGGAISDAIFRWTGRLMLSRKIVLVVALVGTGLCVG VAGIVHTAASAVALMSVALFLLYVTGALYWAVVQDVVHPAKVGGVSGCLHCLGSLSGVIGPAVTGLLVQRSGSFATAFLL AGGVALAGAVLSGIFIREPRARDAIHGRLLREHAGH >Mature_436_residues MKQRTMGWITVFLLFLVYGINYLDRVALSLTAPMIQQDLGIDAAQMGIVFSSFFVGYALFNFVGGLASDRLGPKLVYVLA VALWSLFCGLTAVTIGFASLLLVRVLFGMAEGPLCAGANKMVNNWMPRERAATAMGLLSAGSPLGGALAGPVVGLLAASF GWRPAFWIICAIGLVWVVVWIALTADEPASSRLVAAAEAQPAGAGVARAAHAAFGAEAAQLSLWAWVRQPLIIAAAFAFF SYNYVLFFFLSWFPSYLVQAHHLNLKEMSLATVVPWLVGTVGLAAGGAISDAIFRWTGRLMLSRKIVLVVALVGTGLCVG VAGIVHTAASAVALMSVALFLLYVTGALYWAVVQDVVHPAKVGGVSGCLHCLGSLSGVIGPAVTGLLVQRSGSFATAFLL AGGVALAGAVLSGIFIREPRARDAIHGRLLREHAGH
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI6912666, Length=404, Percent_Identity=23.019801980198, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI154350196, Length=390, Percent_Identity=25.8974358974359, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI9966811, Length=422, Percent_Identity=23.4597156398104, Blast_Score=96, Evalue=6e-20, Organism=Homo sapiens, GI21322234, Length=431, Percent_Identity=24.1299303944316, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI9945322, Length=386, Percent_Identity=22.020725388601, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI148743791, Length=376, Percent_Identity=22.8723404255319, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI4885441, Length=391, Percent_Identity=23.2736572890026, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI148728191, Length=296, Percent_Identity=22.6351351351351, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI223718438, Length=426, Percent_Identity=22.5352112676056, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1789152, Length=427, Percent_Identity=30.6791569086651, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI2367379, Length=410, Percent_Identity=28.0487804878049, Blast_Score=165, Evalue=5e-42, Organism=Escherichia coli, GI1789515, Length=415, Percent_Identity=28.1927710843373, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI87082320, Length=410, Percent_Identity=28.780487804878, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI2367193, Length=353, Percent_Identity=25.7790368271955, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI87081723, Length=255, Percent_Identity=30.1960784313725, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI87082071, Length=377, Percent_Identity=22.2811671087533, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17552542, Length=389, Percent_Identity=25.706940874036, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI32565916, Length=242, Percent_Identity=23.9669421487603, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI32565914, Length=242, Percent_Identity=23.9669421487603, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115533554, Length=351, Percent_Identity=22.2222222222222, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI115533556, Length=351, Percent_Identity=22.2222222222222, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI193205400, Length=238, Percent_Identity=23.109243697479, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17561498, Length=244, Percent_Identity=26.2295081967213, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71991453, Length=367, Percent_Identity=22.8882833787466, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17554148, Length=372, Percent_Identity=23.1182795698925, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71991448, Length=367, Percent_Identity=22.8882833787466, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI115534558, Length=204, Percent_Identity=26.9607843137255, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17535049, Length=411, Percent_Identity=22.6277372262774, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17554962, Length=307, Percent_Identity=21.1726384364821, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17561500, Length=206, Percent_Identity=27.1844660194175, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17540458, Length=240, Percent_Identity=25, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115534562, Length=206, Percent_Identity=27.1844660194175, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17560030, Length=156, Percent_Identity=26.9230769230769, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24648416, Length=388, Percent_Identity=25.5154639175258, Blast_Score=108, Evalue=9e-24, Organism=Drosophila melanogaster, GI21356189, Length=388, Percent_Identity=25.5154639175258, Blast_Score=108, Evalue=9e-24, Organism=Drosophila melanogaster, GI24639764, Length=410, Percent_Identity=22.6829268292683, Blast_Score=98, Evalue=9e-21, Organism=Drosophila melanogaster, GI24641682, Length=415, Percent_Identity=24.578313253012, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI28573299, Length=446, Percent_Identity=23.0941704035874, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24584153, Length=367, Percent_Identity=22.6158038147139, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24654215, Length=413, Percent_Identity=22.0338983050847, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI19920686, Length=411, Percent_Identity=25.7907542579075, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI19922400, Length=413, Percent_Identity=22.0338983050847, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI20129235, Length=370, Percent_Identity=25.6756756756757, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI28573708, Length=420, Percent_Identity=23.3333333333333, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28573707, Length=420, Percent_Identity=23.3333333333333, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24583789, Length=351, Percent_Identity=19.6581196581197, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24655271, Length=433, Percent_Identity=23.094688221709, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI20130135, Length=433, Percent_Identity=23.094688221709, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI62484226, Length=384, Percent_Identity=26.8229166666667, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24580790, Length=358, Percent_Identity=21.7877094972067, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI45550460, Length=384, Percent_Identity=23.4375, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24658658, Length=228, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24653727, Length=402, Percent_Identity=22.636815920398, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24655255, Length=388, Percent_Identity=23.1958762886598, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI20130167, Length=408, Percent_Identity=20.0980392156863, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45550364, Length=411, Percent_Identity=22.1411192214112, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550495, Length=198, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45700; Mature: 45700
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRTMGWITVFLLFLVYGINYLDRVALSLTAPMIQQDLGIDAAQMGIVFSSFFVGYALF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NFVGGLASDRLGPKLVYVLAVALWSLFCGLTAVTIGFASLLLVRVLFGMAEGPLCAGANK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH MVNNWMPRERAATAMGLLSAGSPLGGALAGPVVGLLAASFGWRPAFWIICAIGLVWVVVW HHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IALTADEPASSRLVAAAEAQPAGAGVARAAHAAFGAEAAQLSLWAWVRQPLIIAAAFAFF HHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SYNYVLFFFLSWFPSYLVQAHHLNLKEMSLATVVPWLVGTVGLAAGGAISDAIFRWTGRL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH MLSRKIVLVVALVGTGLCVGVAGIVHTAASAVALMSVALFLLYVTGALYWAVVQDVVHPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVGGVSGCLHCLGSLSGVIGPAVTGLLVQRSGSFATAFLLAGGVALAGAVLSGIFIREPR HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ARDAIHGRLLREHAGH HHHHHHHHHHHHHCCC >Mature Secondary Structure MKQRTMGWITVFLLFLVYGINYLDRVALSLTAPMIQQDLGIDAAQMGIVFSSFFVGYALF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH NFVGGLASDRLGPKLVYVLAVALWSLFCGLTAVTIGFASLLLVRVLFGMAEGPLCAGANK HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH MVNNWMPRERAATAMGLLSAGSPLGGALAGPVVGLLAASFGWRPAFWIICAIGLVWVVVW HHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IALTADEPASSRLVAAAEAQPAGAGVARAAHAAFGAEAAQLSLWAWVRQPLIIAAAFAFF HHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SYNYVLFFFLSWFPSYLVQAHHLNLKEMSLATVVPWLVGTVGLAAGGAISDAIFRWTGRL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH MLSRKIVLVVALVGTGLCVGVAGIVHTAASAVALMSVALFLLYVTGALYWAVVQDVVHPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVGGVSGCLHCLGSLSGVIGPAVTGLLVQRSGSFATAFLLAGGVALAGAVLSGIFIREPR HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ARDAIHGRLLREHAGH HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]