Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is cycG [H]

Identifier: 238023666

GI number: 238023666

Start: 212460

End: 214115

Strand: Reverse

Name: cycG [H]

Synonym: bglu_2g01870

Alternate gene names: 238023666

Gene position: 214115-212460 (Counterclockwise)

Preceding gene: 238023667

Following gene: 238023665

Centisome position: 7.57

GC content: 69.38

Gene sequence:

>1656_bases
ATGCCGTCACCAAGACTTTCATCGCGCTCGTACAAACGCCTTTCCATCGGCATCGCGGCCGCCGTCGTGCTCGGTGTGGG
TGGCTTCCTGCTGCTGAGTTCGCCATGGATGTGGTCGATGACGCATCCGACGCGCAACGTCGCGAGTCCCGGCCCGGCCA
ATCCCGTCAACGGGCGCGAGCTCTTCTTGGCCGGCGACTGCGCGACCTGCCACGCGAGTCCGGGCCGCCACAACCCCCTG
CTGCTCGGCGGCGGCAAGGCGCTCGACACCGCGTTCGGCAAGTTCTTCATGCCGAACATCTCATCCGATCCCGATGACGG
GATCGGCCGCTGGACACTGGCGCAGTTCACGCGCGCGATGCGCGAAGGCGTCGGCCCCGACGGCCGGAACCTCTACCCGG
CGTTCCCCTATACCTCCTACCAGCGCCTGAGCGCCGACGACGTGCGCGACCTGTTCGCCTATCTGAAGACGCTGCCGCCG
GTGCCGGGCAAGGCGCCCGTCCACCAGTTGGCGTTCCCGTACAACCTGCGGCGCGGCGTGGGCATCTGGCGGCTCATGTT
CCTCGACGGCAAGCCGCTCGACGGCGGCGGCCCCGCGCCCGGTACGCCGGCCTCGCTCGGCAGCACGCCTGCGATCCACG
ATCAACTGGTGGCACGCGGCCGCTATCTGGTGGAAGGCGCGGCCCACTGCGCCGAATGCCATTCGCCGCGCAACATGATG
GGCGCGATCGAAAACGGCGAGCGCTTCGCCGGCGGCCCGGCGCCGGACGGCAAGGGTTATTTCCCGAACATCACGCAGAG
CGACACCGGTATCAACTTCTGGGCCGCTGCCTCGATCGTCAATTATCTGAAGACGGGCGTGAGCCCGCTAGGCAAGACGG
CCGGCGGCGACATGGCCGAGGTCGTGCAGAACACGCGGCAGTTGCCCACGCGCGACCTCTGGGCGATGGCCACCTACCTG
AAGACGATCCCGGGCGTCGATCGCCCGGCTCCGGGCCAGCCGGAGCCGAACCGCACCGACAAGGTGGTGATGATCCCGGT
GCGGCACGACGATTCGCCGCTGCCGGCCTCGCCGCAGGCCGACGTCGCCCGGACCGATACGCTCTACGTGGCGGCCACCA
AGCCATTCTTCGGCAAGGCGGAGACGGTCGGCCGCAGCGACGGCAGCGACGGCAAGCTGCTGGCCGCCGCCACGCTGCAC
GTGCTCGAGCGCGACGGCGACGTGCTGCGAGTCGAGCTCGACGGCTGGCAGCCGGCCGGCGTGACCTCGGTTATCTACGC
CCGCCGCGGCAAGCGGATCCTGTCCGCGCTGCTCGACGACACAGCGGCGGCCGGCCTCGAACGCGGCCCCGCCCAGGTCG
ATGCAGACACCGGCGCCGCGTGGACGCCAGTCAAACTCAGGGCGTGGATCGACGGCACCGATCTCAACACCAGCGTAGCG
AATCTCTGGCGCTACTCGTCGGCGCTGCTGAACGGCACCTGCGCGGCCTGCCACTCGCTGCCCGAGCCGCGTCAGTTCTC
CGCCAACCAGTGGGTCGGCACGCTCAACGGCATGCGCCGCTACACGTCGCTGACCGACGACCAGTACCGCATGCTGCTGA
GCTACGTCCAGAACCATGCCCGGGACACGGCACCGCCTGCCGCGGCGAAGCCATGA

Upstream 100 bases:

>100_bases
CTGCCCTGCTTGACCCGAGTCAACCCGGTCCGCTTCCCACGGGTGTTTCATAACTGCCGACATAGCAAAAAGATCCGCAA
TACACCCAGGGGGAACCGAG

Downstream 100 bases:

>100_bases
GCCCCGCCGCCAACGGGCAGGCGGCCCGCGTTGACGAGCGCGAAGCGGCGGCAGCCGTGGCCGGCTGGTTCGGCCGCCTG
CTGCTGGCGCCGCTCGACGC

Product: diheme cytochrome c-type

Products: H2O; trimethylamine; NAD [C]

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MPSPRLSSRSYKRLSIGIAAAVVLGVGGFLLLSSPWMWSMTHPTRNVASPGPANPVNGRELFLAGDCATCHASPGRHNPL
LLGGGKALDTAFGKFFMPNISSDPDDGIGRWTLAQFTRAMREGVGPDGRNLYPAFPYTSYQRLSADDVRDLFAYLKTLPP
VPGKAPVHQLAFPYNLRRGVGIWRLMFLDGKPLDGGGPAPGTPASLGSTPAIHDQLVARGRYLVEGAAHCAECHSPRNMM
GAIENGERFAGGPAPDGKGYFPNITQSDTGINFWAAASIVNYLKTGVSPLGKTAGGDMAEVVQNTRQLPTRDLWAMATYL
KTIPGVDRPAPGQPEPNRTDKVVMIPVRHDDSPLPASPQADVARTDTLYVAATKPFFGKAETVGRSDGSDGKLLAAATLH
VLERDGDVLRVELDGWQPAGVTSVIYARRGKRILSALLDDTAAAGLERGPAQVDADTGAAWTPVKLRAWIDGTDLNTSVA
NLWRYSSALLNGTCAACHSLPEPRQFSANQWVGTLNGMRRYTSLTDDQYRMLLSYVQNHARDTAPPAAAKP

Sequences:

>Translated_551_residues
MPSPRLSSRSYKRLSIGIAAAVVLGVGGFLLLSSPWMWSMTHPTRNVASPGPANPVNGRELFLAGDCATCHASPGRHNPL
LLGGGKALDTAFGKFFMPNISSDPDDGIGRWTLAQFTRAMREGVGPDGRNLYPAFPYTSYQRLSADDVRDLFAYLKTLPP
VPGKAPVHQLAFPYNLRRGVGIWRLMFLDGKPLDGGGPAPGTPASLGSTPAIHDQLVARGRYLVEGAAHCAECHSPRNMM
GAIENGERFAGGPAPDGKGYFPNITQSDTGINFWAAASIVNYLKTGVSPLGKTAGGDMAEVVQNTRQLPTRDLWAMATYL
KTIPGVDRPAPGQPEPNRTDKVVMIPVRHDDSPLPASPQADVARTDTLYVAATKPFFGKAETVGRSDGSDGKLLAAATLH
VLERDGDVLRVELDGWQPAGVTSVIYARRGKRILSALLDDTAAAGLERGPAQVDADTGAAWTPVKLRAWIDGTDLNTSVA
NLWRYSSALLNGTCAACHSLPEPRQFSANQWVGTLNGMRRYTSLTDDQYRMLLSYVQNHARDTAPPAAAKP
>Mature_550_residues
PSPRLSSRSYKRLSIGIAAAVVLGVGGFLLLSSPWMWSMTHPTRNVASPGPANPVNGRELFLAGDCATCHASPGRHNPLL
LGGGKALDTAFGKFFMPNISSDPDDGIGRWTLAQFTRAMREGVGPDGRNLYPAFPYTSYQRLSADDVRDLFAYLKTLPPV
PGKAPVHQLAFPYNLRRGVGIWRLMFLDGKPLDGGGPAPGTPASLGSTPAIHDQLVARGRYLVEGAAHCAECHSPRNMMG
AIENGERFAGGPAPDGKGYFPNITQSDTGINFWAAASIVNYLKTGVSPLGKTAGGDMAEVVQNTRQLPTRDLWAMATYLK
TIPGVDRPAPGQPEPNRTDKVVMIPVRHDDSPLPASPQADVARTDTLYVAATKPFFGKAETVGRSDGSDGKLLAAATLHV
LERDGDVLRVELDGWQPAGVTSVIYARRGKRILSALLDDTAAAGLERGPAQVDADTGAAWTPVKLRAWIDGTDLNTSVAN
LWRYSSALLNGTCAACHSLPEPRQFSANQWVGTLNGMRRYTSLTDDQYRMLLSYVQNHARDTAPPAAAKP

Specific function: Particularly expressed when cells generate energy via aerobic respiration [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787230, Length=183, Percent_Identity=38.7978142076503, Blast_Score=125, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 59016; Mature: 58885

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS00141 ASP_PROTEASE ; PS51007 CYTC ; PS51008 MULTIHEME_CYTC L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPRLSSRSYKRLSIGIAAAVVLGVGGFLLLSSPWMWSMTHPTRNVASPGPANPVNGRE
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCE
LFLAGDCATCHASPGRHNPLLLGGGKALDTAFGKFFMPNISSDPDDGIGRWTLAQFTRAM
EEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
REGVGPDGRNLYPAFPYTSYQRLSADDVRDLFAYLKTLPPVPGKAPVHQLAFPYNLRRGV
HHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHCCC
GIWRLMFLDGKPLDGGGPAPGTPASLGSTPAIHDQLVARGRYLVEGAAHCAECHSPRNMM
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH
GAIENGERFAGGPAPDGKGYFPNITQSDTGINFWAAASIVNYLKTGVSPLGKTAGGDMAE
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VVQNTRQLPTRDLWAMATYLKTIPGVDRPAPGQPEPNRTDKVVMIPVRHDDSPLPASPQA
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC
DVARTDTLYVAATKPFFGKAETVGRSDGSDGKLLAAATLHVLERDGDVLRVELDGWQPAG
CCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCEEHHHHHHHHHCCCCEEEEEECCCCCCC
VTSVIYARRGKRILSALLDDTAAAGLERGPAQVDADTGAAWTPVKLRAWIDGTDLNTSVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHH
NLWRYSSALLNGTCAACHSLPEPRQFSANQWVGTLNGMRRYTSLTDDQYRMLLSYVQNHA
HHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RDTAPPAAAKP
CCCCCCCCCCC
>Mature Secondary Structure 
PSPRLSSRSYKRLSIGIAAAVVLGVGGFLLLSSPWMWSMTHPTRNVASPGPANPVNGRE
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCE
LFLAGDCATCHASPGRHNPLLLGGGKALDTAFGKFFMPNISSDPDDGIGRWTLAQFTRAM
EEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
REGVGPDGRNLYPAFPYTSYQRLSADDVRDLFAYLKTLPPVPGKAPVHQLAFPYNLRRGV
HHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHCCC
GIWRLMFLDGKPLDGGGPAPGTPASLGSTPAIHDQLVARGRYLVEGAAHCAECHSPRNMM
CEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH
GAIENGERFAGGPAPDGKGYFPNITQSDTGINFWAAASIVNYLKTGVSPLGKTAGGDMAE
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
VVQNTRQLPTRDLWAMATYLKTIPGVDRPAPGQPEPNRTDKVVMIPVRHDDSPLPASPQA
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC
DVARTDTLYVAATKPFFGKAETVGRSDGSDGKLLAAATLHVLERDGDVLRVELDGWQPAG
CCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCEEHHHHHHHHHCCCCEEEEEECCCCCCC
VTSVIYARRGKRILSALLDDTAAAGLERGPAQVDADTGAAWTPVKLRAWIDGTDLNTSVA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHH
NLWRYSSALLNGTCAACHSLPEPRQFSANQWVGTLNGMRRYTSLTDDQYRMLLSYVQNHA
HHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RDTAPPAAAKP
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: trimethylamine-N-oxide; NADH [C]

Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7543472 [H]