The gene/protein map for NC_012721 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is ydfG [C]

Identifier: 238023662

GI number: 238023662

Start: 207495

End: 208295

Strand: Direct

Name: ydfG [C]

Synonym: bglu_2g01830

Alternate gene names: 238023662

Gene position: 207495-208295 (Clockwise)

Preceding gene: 238023660

Following gene: 238023663

Centisome position: 7.34

GC content: 69.54

Gene sequence:

>801_bases
ATGACGCACACCCATCCAGGCACGGCACTGATCACGGGCGCTTCCTCGGGGATCGGCGCGGTTTATGCCGATCGGCTTGC
CCGGCGCGGCTACGACCTGATCCTGGTCGCGCGCAGCCGCGAGCGGCTCAACGACGCCGCGCGCCGCATTACCGCTGCAA
CGCAGCGCAACGTGGAAATCCTTGTCGCCGATCTGAGCGCGCGCGCGGGCCTGGCGGCCGTGGAGGGGCGCCTGCGCAGC
GATGCCAGCATCACGCTGCTCGTCAACAACGCCGGCGTGGGCACCCACAAGCCGCTGCTCGACAGTGACGTCGACGACAT
GACGCGCATGATCGAGCTGAACGTCACCGCGCTTATGCGCCTGACCTATGCGGCCGTGCCGGGCTTCGTCGCGCGCGGCC
GCGGCGCGCTCATCAACATCGCCTCGATCGTCGCGATCGCGCCGGAGATGCTGAACGGCGTGTATGGCGGCAGCAAGGCG
TTCGTGCTGGCACTGAGCCAGTCGCTGCACCACGAGTTGGCCGACCAGGGCGTGCGCGTGCAGGCGGTGCTGCCGGGGGC
GACGGCCACCGACTTCTGGCGCACCGGTGGCCTGCCGGTCGAACATCTGCCGAAGGAGATCGTGATGCCGGTGCAGGCGA
TGGTCGATGCCGCGCTGGTCGGCTTCGAGCGCGGCGAGTTGGTGACGATTCCGTCGCTGCACGCGGGCGAGCAATGGGAG
GCCTACGAGGCGGCGCGGCAGGCGATGGCGCCGCACCTGTCGAGCGATTTGCCGGCACCGCGTTATGCGGTGGCGCGATG
A

Upstream 100 bases:

>100_bases
AATGGCATAAAACATGACCATCTACGTCATTTGTGCCGAAACAGAATCGCATCAAAATTCTCTCACTGCATCACCATCTG
ACCCACTACGGAGAGAAATC

Downstream 100 bases:

>100_bases
GGTGGTAAGGCGGAACTTTTCATCAAATCGATAGCTAACGGTAAAACAGAGGATAACGAATCATGAAGCTGAGCGGAAAT
ACCGTCTTCATCACCGGCAG

Product: Short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTHTHPGTALITGASSGIGAVYADRLARRGYDLILVARSRERLNDAARRITAATQRNVEILVADLSARAGLAAVEGRLRS
DASITLLVNNAGVGTHKPLLDSDVDDMTRMIELNVTALMRLTYAAVPGFVARGRGALINIASIVAIAPEMLNGVYGGSKA
FVLALSQSLHHELADQGVRVQAVLPGATATDFWRTGGLPVEHLPKEIVMPVQAMVDAALVGFERGELVTIPSLHAGEQWE
AYEAARQAMAPHLSSDLPAPRYAVAR

Sequences:

>Translated_266_residues
MTHTHPGTALITGASSGIGAVYADRLARRGYDLILVARSRERLNDAARRITAATQRNVEILVADLSARAGLAAVEGRLRS
DASITLLVNNAGVGTHKPLLDSDVDDMTRMIELNVTALMRLTYAAVPGFVARGRGALINIASIVAIAPEMLNGVYGGSKA
FVLALSQSLHHELADQGVRVQAVLPGATATDFWRTGGLPVEHLPKEIVMPVQAMVDAALVGFERGELVTIPSLHAGEQWE
AYEAARQAMAPHLSSDLPAPRYAVAR
>Mature_265_residues
THTHPGTALITGASSGIGAVYADRLARRGYDLILVARSRERLNDAARRITAATQRNVEILVADLSARAGLAAVEGRLRSD
ASITLLVNNAGVGTHKPLLDSDVDDMTRMIELNVTALMRLTYAAVPGFVARGRGALINIASIVAIAPEMLNGVYGGSKAF
VLALSQSLHHELADQGVRVQAVLPGATATDFWRTGGLPVEHLPKEIVMPVQAMVDAALVGFERGELVTIPSLHAGEQWEA
YEAARQAMAPHLSSDLPAPRYAVAR

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705855, Length=195, Percent_Identity=32.8205128205128, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI226371731, Length=185, Percent_Identity=32.4324324324324, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI4557649, Length=186, Percent_Identity=34.4086021505376, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI7706318, Length=187, Percent_Identity=29.9465240641711, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI15277342, Length=218, Percent_Identity=30.2752293577982, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI40254992, Length=206, Percent_Identity=28.1553398058252, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI7657478, Length=194, Percent_Identity=29.3814432989691, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI5031737, Length=193, Percent_Identity=31.0880829015544, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI32483357, Length=203, Percent_Identity=30.0492610837438, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=31.0880829015544, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI40807363, Length=221, Percent_Identity=28.5067873303167, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI19743808, Length=200, Percent_Identity=29, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI20149619, Length=189, Percent_Identity=27.5132275132275, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI109715829, Length=192, Percent_Identity=30.2083333333333, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI7705925, Length=184, Percent_Identity=28.804347826087, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787820, Length=186, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI87082100, Length=185, Percent_Identity=34.5945945945946, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787335, Length=187, Percent_Identity=31.0160427807487, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87082160, Length=188, Percent_Identity=26.063829787234, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788459, Length=185, Percent_Identity=32.4324324324324, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789208, Length=185, Percent_Identity=29.1891891891892, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786701, Length=185, Percent_Identity=28.1081081081081, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1790717, Length=185, Percent_Identity=28.1081081081081, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1787526, Length=209, Percent_Identity=28.7081339712919, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=192, Percent_Identity=36.4583333333333, Blast_Score=103, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71994600, Length=193, Percent_Identity=34.1968911917098, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17562904, Length=202, Percent_Identity=31.1881188118812, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=207, Percent_Identity=30.4347826086957, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17538480, Length=206, Percent_Identity=31.5533980582524, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI212646214, Length=192, Percent_Identity=29.1666666666667, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17557668, Length=189, Percent_Identity=26.984126984127, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17559552, Length=189, Percent_Identity=26.984126984127, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI25152911, Length=190, Percent_Identity=28.9473684210526, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17559104, Length=218, Percent_Identity=30.2752293577982, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560676, Length=190, Percent_Identity=30.5263157894737, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=202, Percent_Identity=31.1881188118812, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=199, Percent_Identity=29.6482412060301, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=215, Percent_Identity=26.9767441860465, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562910, Length=198, Percent_Identity=29.7979797979798, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=215, Percent_Identity=29.3023255813954, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=192, Percent_Identity=29.6875, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=201, Percent_Identity=28.3582089552239, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=199, Percent_Identity=30.6532663316583, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=192, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=204, Percent_Identity=28.921568627451, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=210, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=186, Percent_Identity=30.6451612903226, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25147288, Length=184, Percent_Identity=27.7173913043478, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=203, Percent_Identity=27.5862068965517, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6319635, Length=188, Percent_Identity=28.7234042553192, Blast_Score=81, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323882, Length=197, Percent_Identity=34.010152284264, Blast_Score=76, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6322067, Length=194, Percent_Identity=27.8350515463918, Blast_Score=69, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24640442, Length=191, Percent_Identity=33.5078534031414, Blast_Score=107, Evalue=6e-24,
Organism=Drosophila melanogaster, GI161076933, Length=199, Percent_Identity=33.6683417085427, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24584748, Length=199, Percent_Identity=33.6683417085427, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571526, Length=199, Percent_Identity=35.678391959799, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI23397609, Length=193, Percent_Identity=36.7875647668394, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24584752, Length=185, Percent_Identity=30.8108108108108, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI28574402, Length=186, Percent_Identity=31.1827956989247, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24584744, Length=186, Percent_Identity=31.1827956989247, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21357041, Length=195, Percent_Identity=33.8461538461538, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24644339, Length=199, Percent_Identity=32.6633165829146, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24643142, Length=216, Percent_Identity=30.5555555555556, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116007236, Length=214, Percent_Identity=28.5046728971963, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24665247, Length=209, Percent_Identity=24.8803827751196, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221331216, Length=209, Percent_Identity=24.8803827751196, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28254; Mature: 28123

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTHTHPGTALITGASSGIGAVYADRLARRGYDLILVARSRERLNDAARRITAATQRNVEI
CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEE
LVADLSARAGLAAVEGRLRSDASITLLVNNAGVGTHKPLLDSDVDDMTRMIELNVTALMR
EEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LTYAAVPGFVARGRGALINIASIVAIAPEMLNGVYGGSKAFVLALSQSLHHELADQGVRV
HHHHHCCCHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEE
QAVLPGATATDFWRTGGLPVEHLPKEIVMPVQAMVDAALVGFERGELVTIPSLHAGEQWE
EEEECCCCHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHH
AYEAARQAMAPHLSSDLPAPRYAVAR
HHHHHHHHHCCHHCCCCCCCCHHCCC
>Mature Secondary Structure 
THTHPGTALITGASSGIGAVYADRLARRGYDLILVARSRERLNDAARRITAATQRNVEI
CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEE
LVADLSARAGLAAVEGRLRSDASITLLVNNAGVGTHKPLLDSDVDDMTRMIELNVTALMR
EEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LTYAAVPGFVARGRGALINIASIVAIAPEMLNGVYGGSKAFVLALSQSLHHELADQGVRV
HHHHHCCCHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEE
QAVLPGATATDFWRTGGLPVEHLPKEIVMPVQAMVDAALVGFERGELVTIPSLHAGEQWE
EEEECCCCHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHH
AYEAARQAMAPHLSSDLPAPRYAVAR
HHHHHHHHHCCHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12950922 [H]