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The map label for this gene is bkdR [H]

Identifier: 238023654

GI number: 238023654

Start: 193446

End: 193925

Strand: Direct

Name: bkdR [H]

Synonym: bglu_2g01660

Alternate gene names: 238023654

Gene position: 193446-193925 (Clockwise)

Preceding gene: 238023653

Following gene: 238023655

Centisome position: 6.84

GC content: 51.46

Gene sequence:

>480_bases
ATGGAAGAACTTGATAAAGTCGATGTTGAGATTGTTCGGCGATTGCAGATGGATGGGCGTCTGTCGAATGCAAAACTGGC
AGAAGAATTGCATATAAGCGATGCCTCATGCTGGCGGCGCACGAGACGATTGGAAGAGCAAGGGATCATTCAGGGCTACG
AGGCGATCGTCAATCGTCGGAAAGTTGGGGGCGGAGTCATGGCCTTTGTGCAAATCGTGTGCACTCAGCATGGCGATGAG
GTGACGGCGGCGTTCGAGCGAATAATTTTTGCGTGCCCGCAGGTGCTGGCATGTCACAACACGACTGGTGAAGCTGATTT
CCTTCTGCAGGTTGTTGCAAGGGATCTTGATGATTACAGCCGCTTCGTCGACCGAGTGCTGCGAAAATTGCCGGGAGTAT
CAAGCATTCGATCGAACTTATCTTTGAGAGAGCTGAAGGAAACACATCAGCTGCCCGTCGCTGACTTGACTGCAATCTAA

Upstream 100 bases:

>100_bases
GAAGACCGAGTGGCATTCGTCATTGACGCCGGCCACCGTAGCCCTCGCCGCAAGAGATGGCGCAAAGATTATAATTTGAA
TTTTTGAGGGAATTTTTGGG

Downstream 100 bases:

>100_bases
GCATGCGGTTGATTCAACAATACAGTTGTTTTATGTTGTGTAAGGTTGTTGCATTTTTTAACCTGAACTGACTGCGCCAT
CAAATTCATGTGATTATCGA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MEELDKVDVEIVRRLQMDGRLSNAKLAEELHISDASCWRRTRRLEEQGIIQGYEAIVNRRKVGGGVMAFVQIVCTQHGDE
VTAAFERIIFACPQVLACHNTTGEADFLLQVVARDLDDYSRFVDRVLRKLPGVSSIRSNLSLRELKETHQLPVADLTAI

Sequences:

>Translated_159_residues
MEELDKVDVEIVRRLQMDGRLSNAKLAEELHISDASCWRRTRRLEEQGIIQGYEAIVNRRKVGGGVMAFVQIVCTQHGDE
VTAAFERIIFACPQVLACHNTTGEADFLLQVVARDLDDYSRFVDRVLRKLPGVSSIRSNLSLRELKETHQLPVADLTAI
>Mature_159_residues
MEELDKVDVEIVRRLQMDGRLSNAKLAEELHISDASCWRRTRRLEEQGIIQGYEAIVNRRKVGGGVMAFVQIVCTQHGDE
VTAAFERIIFACPQVLACHNTTGEADFLLQVVARDLDDYSRFVDRVLRKLPGVSSIRSNLSLRELKETHQLPVADLTAI

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=34.6666666666667, Blast_Score=110, Evalue=6e-26,
Organism=Escherichia coli, GI1787116, Length=150, Percent_Identity=32.6666666666667, Blast_Score=106, Evalue=6e-25,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17962; Mature: 17962

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELDKVDVEIVRRLQMDGRLSNAKLAEELHISDASCWRRTRRLEEQGIIQGYEAIVNRR
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGGGVMAFVQIVCTQHGDEVTAAFERIIFACPQVLACHNTTGEADFLLQVVARDLDDYS
HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RFVDRVLRKLPGVSSIRSNLSLRELKETHQLPVADLTAI
HHHHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MEELDKVDVEIVRRLQMDGRLSNAKLAEELHISDASCWRRTRRLEEQGIIQGYEAIVNRR
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGGGVMAFVQIVCTQHGDEVTAAFERIIFACPQVLACHNTTGEADFLLQVVARDLDDYS
HCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RFVDRVLRKLPGVSSIRSNLSLRELKETHQLPVADLTAI
HHHHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]