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The map label for this gene is 238023633

Identifier: 238023633

GI number: 238023633

Start: 157164

End: 157697

Strand: Direct

Name: 238023633

Synonym: bglu_2g01420

Alternate gene names: NA

Gene position: 157164-157697 (Clockwise)

Preceding gene: 238023632

Following gene: 238023634

Centisome position: 5.56

GC content: 59.55

Gene sequence:

>534_bases
ATGTCCGTTTCCAACAATTCTCAGAAATTCATTGCGCGTAATCGCGCGCCGCGCGTGCAGATCGAATACGACGTGGAAAT
CTACGGCTCGGAAAAGAAGGTCGAGTTGCCGTTCGTGATGGGCGTGCTGGCCGATCTGTCAGGCAAACCGATCGAGGCGT
TGCCGGCCGTAGCCGAACGCAAGTTCTTCAATATCGACATCGACAATTTCGACGAACGCATGAAGGCGATGAAGCCGCGC
GTCGCGTTCTCGGTGCCGAACACGCTGACGAATCAGGGAGAGTTGATGGTCGACATGACCTTCGAGAGCATGGACGATTT
CTCGCCCGCTGCCGTGGCGAGGAAGGTCGACGCGCTCGCGCAACTGCTCGACGCACGCACACAGCTCGCCAACCTGCAAA
CCTACATGGACGGCAAGGCCGGGGCCGAAAGTCTCGTCAGCAAAGTATTGCGTGATCCCGCCTTGCTCGAAGCACTCGCC
AAGGCGCCCAAGCCGCGGTCCGCATCCTCCGACGACGCAACGGCCGGTGAGTGA

Upstream 100 bases:

>100_bases
CGAACTCGCCATCTACCATCTGCCGTGAAGCCGATTTCTTCGGGCCGGTCGCAACAACGTGGTCCGCCCTTTTCATCGTG
TGAATCTCGCCGGAGCAAGC

Downstream 100 bases:

>100_bases
GCGTCCATCGATGGACGCCACGCATGCGTCGTCTGTTTTTGCTTGGCCGCGAGATTTGAAAAAAAACGGGAGAAATAATG
GTCGAACGTCAATCGAAGGC

Product: type VI secretion protein

Products: NA

Alternate protein names: T6ss S; Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion System Protein; Protein ImpB; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSVSNNSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPIEALPAVAERKFFNIDIDNFDERMKAMKPR
VAFSVPNTLTNQGELMVDMTFESMDDFSPAAVARKVDALAQLLDARTQLANLQTYMDGKAGAESLVSKVLRDPALLEALA
KAPKPRSASSDDATAGE

Sequences:

>Translated_177_residues
MSVSNNSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPIEALPAVAERKFFNIDIDNFDERMKAMKPR
VAFSVPNTLTNQGELMVDMTFESMDDFSPAAVARKVDALAQLLDARTQLANLQTYMDGKAGAESLVSKVLRDPALLEALA
KAPKPRSASSDDATAGE
>Mature_176_residues
SVSNNSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPIEALPAVAERKFFNIDIDNFDERMKAMKPRV
AFSVPNTLTNQGELMVDMTFESMDDFSPAAVARKVDALAQLLDARTQLANLQTYMDGKAGAESLVSKVLRDPALLEALAK
APKPRSASSDDATAGE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19369; Mature: 19238

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSNNSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPIEALPAVAER
CCCCCCCHHHHHCCCCCEEEEEEEEEEECCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHC
KFFNIDIDNFDERMKAMKPRVAFSVPNTLTNQGELMVDMTFESMDDFSPAAVARKVDALA
EEEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHH
QLLDARTQLANLQTYMDGKAGAESLVSKVLRDPALLEALAKAPKPRSASSDDATAGE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVSNNSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPIEALPAVAER
CCCCCCHHHHHCCCCCEEEEEEEEEEECCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHC
KFFNIDIDNFDERMKAMKPRVAFSVPNTLTNQGELMVDMTFESMDDFSPAAVARKVDALA
EEEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHH
QLLDARTQLANLQTYMDGKAGAESLVSKVLRDPALLEALAKAPKPRSASSDDATAGE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA