| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023634
Identifier: 238023634
GI number: 238023634
Start: 157775
End: 159277
Strand: Direct
Name: 238023634
Synonym: bglu_2g01430
Alternate gene names: NA
Gene position: 157775-159277 (Clockwise)
Preceding gene: 238023633
Following gene: 238023635
Centisome position: 5.58
GC content: 61.21
Gene sequence:
>1503_bases ATGGTCGAACGTCAATCGAAGGCTCACGTGGGGGCGGCGCCGAGCGTCGTCAGCCAGTCCGATTTTAACGCGCTGCTGTC GCGCGAATTCAAGCCGAAAACCGAGCGGGCCCGAGAGGCCGTGCAGAGCGCCGTGCAGACGCTCGCGCAACAGGCGCTGC TCACCTCGACAGTGCTCGCCGACGATGCTTACAAGAACATCGAGGCGATCATCGGCGAGATCGATCGAAAACTCTCCGAG CAGATCAATCTGGTGCTGCATCACGACGATTTCCAGAAGCTCGAGAGTGCGTGGCGTGGCCTGCATTATCTGGTCACCAA CACCGAGACCGACGAGCGACTCAAGATCCGCTTCATGGACGTCTCGAAGGACGACCTGCGGCGCGTGATGAAGCGCTACA AGGGCGTGGCCTGGGATCAGAGCCCGTTCTTCAAGCAAATCTACGAGGAGGAGTACGGCCAGCTCGGCGGTGAGCCATAC GGCTGCCTGATCGCCGATTACTACTTCGACCACACGCCGCCCGATGTCGATTTGCTGGCCTCGATCGCCAAGGTTGCCGC TGCCGCGCACGCGCCGTTTATCGCCGGTGCCGCACCGTCGGTGCTCCAGATGGACACCTGGCAGGAACTCGCGAATCCGC GCGACCTGACCAAGATATTTACCCAGAACCTCGAATACGCGCCGTGGAATTCGCTGCGCAACTCGGAGGACTCGCGCTAC ATCGGGCTCGCGATGCCGCGCTTCTTGTCGCGCTTGCCATACGGCATCAAAACGAATCCGGTCGACGAGTTCGACTTCGA GGAAGCGACCGACGGTGCCGATCATCGCAAGTACGTATGGTCGAACGCGGCCTATGCGATGGCAGTGAACATCAATCGCT CGTTCAAGCACTACGGCTGGTGCACCCTGATTCGCGGCGTGGAGAGTGGCGGGGTAGTGGAGAATCTGCCCTGCCACACG TTCCCGACCGACGATGGTGGGGTCGACATGAAGTGCCCGACCGAAATCGCGATTTCCGATCGCCGCGAGGCGGAGCTGGC GAAAAACGGCTTCATACCGCTGATTCATCGCAAGAACACCGATTACGCGGCATTCATCGGCGCGCAGTCGCTGCAGAAGC CGGTCGAATACTACGACCCGGACGCCACCGCGAACGCCAATCTCTCGGCGCGCCTGCCTTATTTGTTCGCGTGCTCGCGC TTCGCACATTACCTGAAATGCATCGTGCGCGACAAGATCGGCTCGTTCAAGGAGCGCGACGAGATGCAGCAATGGCTCAA TGAGTGGGTGATGAACTACGTCGACGCGGATCCGGCGAATTCATCGCAGGAGACCAAGGCCCGGCGGCCTCTCGCGGCCG CCGAGGTGGTAGTCGAGGATGTCGAGGGCAATCCCGGCTACTACCAGGCGAAGTTTTTCCTGCGCCCGCATTTCCAGCTC GAGGGCCTGACGGTGTCGCTGCGTCTCGTCGCCAAGCTGCCGCTAGTGAAGCAAGCGGCCTGA
Upstream 100 bases:
>100_bases ACGACGCAACGGCCGGTGAGTGAGCGTCCATCGATGGACGCCACGCATGCGTCGTCTGTTTTTGCTTGGCCGCGAGATTT GAAAAAAAACGGGAGAAATA
Downstream 100 bases:
>100_bases CGGCTCGGCGGCCCAACGGGCCGGTGGCCCGGCGGGCTGCGGTTGCACCGCGAGCGAGCGGTGCCGGCGCTCGTTAAATA TGCCTGGCGGTTTCGAACCT
Product: EvpB family type VI secretion protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MVERQSKAHVGAAPSVVSQSDFNALLSREFKPKTERAREAVQSAVQTLAQQALLTSTVLADDAYKNIEAIIGEIDRKLSE QINLVLHHDDFQKLESAWRGLHYLVTNTETDERLKIRFMDVSKDDLRRVMKRYKGVAWDQSPFFKQIYEEEYGQLGGEPY GCLIADYYFDHTPPDVDLLASIAKVAAAAHAPFIAGAAPSVLQMDTWQELANPRDLTKIFTQNLEYAPWNSLRNSEDSRY IGLAMPRFLSRLPYGIKTNPVDEFDFEEATDGADHRKYVWSNAAYAMAVNINRSFKHYGWCTLIRGVESGGVVENLPCHT FPTDDGGVDMKCPTEIAISDRREAELAKNGFIPLIHRKNTDYAAFIGAQSLQKPVEYYDPDATANANLSARLPYLFACSR FAHYLKCIVRDKIGSFKERDEMQQWLNEWVMNYVDADPANSSQETKARRPLAAAEVVVEDVEGNPGYYQAKFFLRPHFQL EGLTVSLRLVAKLPLVKQAA
Sequences:
>Translated_500_residues MVERQSKAHVGAAPSVVSQSDFNALLSREFKPKTERAREAVQSAVQTLAQQALLTSTVLADDAYKNIEAIIGEIDRKLSE QINLVLHHDDFQKLESAWRGLHYLVTNTETDERLKIRFMDVSKDDLRRVMKRYKGVAWDQSPFFKQIYEEEYGQLGGEPY GCLIADYYFDHTPPDVDLLASIAKVAAAAHAPFIAGAAPSVLQMDTWQELANPRDLTKIFTQNLEYAPWNSLRNSEDSRY IGLAMPRFLSRLPYGIKTNPVDEFDFEEATDGADHRKYVWSNAAYAMAVNINRSFKHYGWCTLIRGVESGGVVENLPCHT FPTDDGGVDMKCPTEIAISDRREAELAKNGFIPLIHRKNTDYAAFIGAQSLQKPVEYYDPDATANANLSARLPYLFACSR FAHYLKCIVRDKIGSFKERDEMQQWLNEWVMNYVDADPANSSQETKARRPLAAAEVVVEDVEGNPGYYQAKFFLRPHFQL EGLTVSLRLVAKLPLVKQAA >Mature_500_residues MVERQSKAHVGAAPSVVSQSDFNALLSREFKPKTERAREAVQSAVQTLAQQALLTSTVLADDAYKNIEAIIGEIDRKLSE QINLVLHHDDFQKLESAWRGLHYLVTNTETDERLKIRFMDVSKDDLRRVMKRYKGVAWDQSPFFKQIYEEEYGQLGGEPY GCLIADYYFDHTPPDVDLLASIAKVAAAAHAPFIAGAAPSVLQMDTWQELANPRDLTKIFTQNLEYAPWNSLRNSEDSRY IGLAMPRFLSRLPYGIKTNPVDEFDFEEATDGADHRKYVWSNAAYAMAVNINRSFKHYGWCTLIRGVESGGVVENLPCHT FPTDDGGVDMKCPTEIAISDRREAELAKNGFIPLIHRKNTDYAAFIGAQSLQKPVEYYDPDATANANLSARLPYLFACSR FAHYLKCIVRDKIGSFKERDEMQQWLNEWVMNYVDADPANSSQETKARRPLAAAEVVVEDVEGNPGYYQAKFFLRPHFQL EGLTVSLRLVAKLPLVKQAA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56524; Mature: 56524
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERQSKAHVGAAPSVVSQSDFNALLSREFKPKTERAREAVQSAVQTLAQQALLTSTVLA CCCCCCCCCCCCCCCHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DDAYKNIEAIIGEIDRKLSEQINLVLHHDDFQKLESAWRGLHYLVTNTETDERLKIRFMD HHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHCCEEEEEECCCCCCEEEEEEEC VSKDDLRRVMKRYKGVAWDQSPFFKQIYEEEYGQLGGEPYGCLIADYYFDHTPPDVDLLA CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHH SIAKVAAAAHAPFIAGAAPSVLQMDTWQELANPRDLTKIFTQNLEYAPWNSLRNSEDSRY HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHCCCCCCCE IGLAMPRFLSRLPYGIKTNPVDEFDFEEATDGADHRKYVWSNAAYAMAVNINRSFKHYGW EEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCHHHHH CTLIRGVESGGVVENLPCHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFIPLIHRKNT HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCC DYAAFIGAQSLQKPVEYYDPDATANANLSARLPYLFACSRFAHYLKCIVRDKIGSFKERD CHHHHHCHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH EMQQWLNEWVMNYVDADPANSSQETKARRPLAAAEVVVEDVEGNPGYYQAKFFLRPHFQL HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCEEE EGLTVSLRLVAKLPLVKQAA CCEEEEEEHHHHCCHHHCCC >Mature Secondary Structure MVERQSKAHVGAAPSVVSQSDFNALLSREFKPKTERAREAVQSAVQTLAQQALLTSTVLA CCCCCCCCCCCCCCCHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DDAYKNIEAIIGEIDRKLSEQINLVLHHDDFQKLESAWRGLHYLVTNTETDERLKIRFMD HHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHCCEEEEEECCCCCCEEEEEEEC VSKDDLRRVMKRYKGVAWDQSPFFKQIYEEEYGQLGGEPYGCLIADYYFDHTPPDVDLLA CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHH SIAKVAAAAHAPFIAGAAPSVLQMDTWQELANPRDLTKIFTQNLEYAPWNSLRNSEDSRY HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHCCCCCCCE IGLAMPRFLSRLPYGIKTNPVDEFDFEEATDGADHRKYVWSNAAYAMAVNINRSFKHYGW EEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCHHHHH CTLIRGVESGGVVENLPCHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFIPLIHRKNT HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEECCC DYAAFIGAQSLQKPVEYYDPDATANANLSARLPYLFACSRFAHYLKCIVRDKIGSFKERD CHHHHHCHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH EMQQWLNEWVMNYVDADPANSSQETKARRPLAAAEVVVEDVEGNPGYYQAKFFLRPHFQL HHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCEEE EGLTVSLRLVAKLPLVKQAA CCEEEEEEHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA