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The map label for this gene is nahR [H]

Identifier: 238023597

GI number: 238023597

Start: 104126

End: 105121

Strand: Direct

Name: nahR [H]

Synonym: bglu_2g01000

Alternate gene names: 238023597

Gene position: 104126-105121 (Clockwise)

Preceding gene: 238023589

Following gene: 238023599

Centisome position: 3.68

GC content: 69.18

Gene sequence:

>996_bases
ATGCGATCGCTCGACGGTGTCGACCTCAACCTGCTGCAAGTCTTTCTGGCCATCGTCGAGGAGCAGAGCCTGACCAAGGC
CGGCGCGCGGCTGGCGCTGTCACAGCCGGCGATGAGCTATTCGCTGGCGCGGCTGCGCGCGCTGTTCGACGATCCGCTGT
TCGTGCGCACGCGCCATGGCATGCAGCCCACGCCGATTTCGCAGGAACTGGCGGTGATCGTCGCGCGCGCGCTCGATACC
GTGCGCGAGGCGCTGCGCTATGCCGAGCGGTTCGATCCCGCCGTCAGCACGCGCGCGTTCCGTCTGTCGCTCTCGGACGC
GGGCGAGATGGCTTATCTGCCGTCGATCTGCGAGGAAGTGAATCGGCTGGCGCCGAACATCAAGGTGGTCGTGCAGCCGC
TGCCGGTGGGCGAGATCGAGGACGCGCTGCGCGCGCGCCGGCTCGATTTCGCGATCGGCAACCTGCCCGAGCTGACGGCG
CGCACGCGCCACCAGGTGCTGTTCGAGGAAGGGTACGTCTGCATGATGCGACGCCGCGTGGGCGGCCCGGCCAGACCGGC
ATTGACGCTGGCCGAATTCGGCCGCGCCTCGCACGTGCTGGTGCGCTCGATCGAGCACAGCCACCACGCGCTCGACGATG
CGCTGCGCACCCAGGGCGTGGCGCGCAACATCGGCCTCGAGGTGCCGCACTTCGTGGCACTGCCGCGCGTGCTGGCCGTG
ACCGATTTCGTCGCCACGCTGCCGCGCCGGCTGGCCCAGATCTTCGCGAAGGACGGCGCGTTCGACATCTTCGAGCTGCC
GGTGGCGATCGCGCCGGTGGGCGTGACGATGCACTGGCACGAGCATTTTCACGAGGACGAGGGCATTGCCTGGATGCGCC
AGCTGCTGGGCCAGATCATGCGGCGCTTCGCAGGCTCGGAGGCGGCCGCCCGGCCCGCGCTCAGACGTCGAGCACGATCC
GCTTCGAGCGCGAGCGCGACACGCAGCAGCAAATGA

Upstream 100 bases:

>100_bases
CGCCGGAGCTGGCCGGCGCTTGGCGATAGTGTCGAGCGGGGGGTGTCATGCGTCAAATTGATCTAAAATCGCAAGTCACA
TCAACCGGATGGATATCACC

Downstream 100 bases:

>100_bases
CCCGGTTGGCGGCGCGCTCGGCCTTGCTCAGACAGTGGTCGCGGTGGTCGGGCTCGCCGTCCACCACGTCGACGATGCAG
GTGCCGCACACGCCTTCGCC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MRSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHGMQPTPISQELAVIVARALDT
VREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEVNRLAPNIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTA
RTRHQVLFEEGYVCMMRRRVGGPARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPHFVALPRVLAV
TDFVATLPRRLAQIFAKDGAFDIFELPVAIAPVGVTMHWHEHFHEDEGIAWMRQLLGQIMRRFAGSEAAARPALRRRARS
ASSASATRSSK

Sequences:

>Translated_331_residues
MRSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHGMQPTPISQELAVIVARALDT
VREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEVNRLAPNIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTA
RTRHQVLFEEGYVCMMRRRVGGPARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPHFVALPRVLAV
TDFVATLPRRLAQIFAKDGAFDIFELPVAIAPVGVTMHWHEHFHEDEGIAWMRQLLGQIMRRFAGSEAAARPALRRRARS
ASSASATRSSK
>Mature_331_residues
MRSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHGMQPTPISQELAVIVARALDT
VREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEVNRLAPNIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTA
RTRHQVLFEEGYVCMMRRRVGGPARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPHFVALPRVLAV
TDFVATLPRRLAQIFAKDGAFDIFELPVAIAPVGVTMHWHEHFHEDEGIAWMRQLLGQIMRRFAGSEAAARPALRRRARS
ASSASATRSSK

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=312, Percent_Identity=29.4871794871795, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI87081766, Length=259, Percent_Identity=24.7104247104247, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790147, Length=305, Percent_Identity=23.9344262295082, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788748, Length=240, Percent_Identity=25.8333333333333, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 36730; Mature: 36730

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCC
MQPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCHHHHHHHHHHH
NRLAPNIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTARTRHQVLFEEGYVCMMRRRV
HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHC
GGPARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPHFVALPRVLAV
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TDFVATLPRRLAQIFAKDGAFDIFELPVAIAPVGVTMHWHEHFHEDEGIAWMRQLLGQIM
HHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCEEEHHHHHHCCCCCHHHHHHHHHHHH
RRFAGSEAAARPALRRRARSASSASATRSSK
HHHCCCHHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure
MRSLDGVDLNLLQVFLAIVEEQSLTKAGARLALSQPAMSYSLARLRALFDDPLFVRTRHG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCC
MQPTPISQELAVIVARALDTVREALRYAERFDPAVSTRAFRLSLSDAGEMAYLPSICEEV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCCHHHHHHHHHHH
NRLAPNIKVVVQPLPVGEIEDALRARRLDFAIGNLPELTARTRHQVLFEEGYVCMMRRRV
HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHC
GGPARPALTLAEFGRASHVLVRSIEHSHHALDDALRTQGVARNIGLEVPHFVALPRVLAV
CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TDFVATLPRRLAQIFAKDGAFDIFELPVAIAPVGVTMHWHEHFHEDEGIAWMRQLLGQIM
HHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCEEEHHHHHHCCCCCHHHHHHHHHHHH
RRFAGSEAAARPALRRRARSASSASATRSSK
HHHCCCHHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]