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The map label for this gene is ocd2 [H]

Identifier: 238023599

GI number: 238023599

Start: 106495

End: 107634

Strand: Direct

Name: ocd2 [H]

Synonym: bglu_2g01020

Alternate gene names: 238023599

Gene position: 106495-107634 (Clockwise)

Preceding gene: 238023597

Following gene: 238023600

Centisome position: 3.77

GC content: 65.44

Gene sequence:

>1140_bases
ATGACACGAGACACGAAGATTGATTTCATTTACCTGTCCGAGCAGGACATGATCCACGCCGGCGTGACCGACATGCCCGC
CTGCGTCGACACCATGGAGGAAATGTTCGGACTCCTGTATCACGGCGACTACCGGATGGCCGGCGCCAACAACGATTCCC
ACGGTGCCGCGGTGTTCTTCCCCGAGCAGTCGCCGTTTCCCGACATGCCCAAGCCGACCGCGGATCGCCGCTTCATGGCG
ATGCCGGCCTATCTCGGCGGCCGCTTTCGCACCGCGGGCATGAAATGGTACGGCTCGAACATCGAGAACCGCGACAAGGG
GCTGCCGCGCTCGATCCTGACCTTCGTGCTCAATGACGCCGACACGGCCGCGCCGCTCGCCTTCATGTCGGCGAACCTGC
TGTCGGCATATCGCACCGGCGCGATCCCCGGCGTGGGCGCGCGTCACCTGGCGCGCAAGGACTCGCGCATCGTCGGCATC
GTCGGCCCCGGGGTGATGGCCAAGACCACGTTGATGGCCCTGATCGCGGCCTGCCCGATGATCGACACGGTGAAAATCAA
GGGACGCGGCCAGGCCAGCCTCGACAGCTTTCTGAGCTGGCTCGCGGTGACGTTCCCGCAGGTCACGACCGTCGAGGTGG
TCGATACCGTCGAGGCCGTGGTGCGTGGCTCGGATATCGTCAGCTACTGCAATTCCGGCGCGACCGGCGACCCCTCGCAG
TATCCGCTCGTCAAGCGCGAGTGGGTGAAGCCCGGCACTTATCTGGCGATGCCGGCGCTCTGCAACATCGACGAGGGCAT
GGAGCGGGCCGAGGTGCGCAAGGTGGTCGACAACGCCGGGCTCTACGAAGCGTGGTTCGAGGAGCTGCCGAAACCCGCGC
ATACCCACGTGCCGATCATCGGCGTGCGCTTCATGGACATGATCGCGGAGGGCAAGATGGCCGCCGAGCAGCTGGAAGAC
CTGGGCAAGATCGTGGCGGGCCAGGCGCCGGGCCGCCAGAACGATGACGAGATCATCATCATGTCGGTGGGCGGGATGCC
GGTGGAGGACGTGGCGTGGGGCACGGTGGTGTATCGCAACGCGATCGAGCGCGGCATCGGCGTGAAGCTGAACCTGTGGG
ACGTGCCCGTATTGCGCTGA

Upstream 100 bases:

>100_bases
CTTGCCTCCCTATCCGATACTCGTGCCGAGCGATCCCGCCACCCACGAATGATCCGGCCGTAGCGCAGCGCGCCGGAGAT
TCGAGTCGAGAAAATTTCAA

Downstream 100 bases:

>100_bases
GTGGCCCGACAGCGCGCGGCGCGTGTCCGCGCCGCGCTGCGCTTCCTTTCAAGCATCCGTTTTCGGAGGTTGCATGACCA
AGATAGTCAAGATCAAGACC

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTRDTKIDFIYLSEQDMIHAGVTDMPACVDTMEEMFGLLYHGDYRMAGANNDSHGAAVFFPEQSPFPDMPKPTADRRFMA
MPAYLGGRFRTAGMKWYGSNIENRDKGLPRSILTFVLNDADTAAPLAFMSANLLSAYRTGAIPGVGARHLARKDSRIVGI
VGPGVMAKTTLMALIAACPMIDTVKIKGRGQASLDSFLSWLAVTFPQVTTVEVVDTVEAVVRGSDIVSYCNSGATGDPSQ
YPLVKREWVKPGTYLAMPALCNIDEGMERAEVRKVVDNAGLYEAWFEELPKPAHTHVPIIGVRFMDMIAEGKMAAEQLED
LGKIVAGQAPGRQNDDEIIIMSVGGMPVEDVAWGTVVYRNAIERGIGVKLNLWDVPVLR

Sequences:

>Translated_379_residues
MTRDTKIDFIYLSEQDMIHAGVTDMPACVDTMEEMFGLLYHGDYRMAGANNDSHGAAVFFPEQSPFPDMPKPTADRRFMA
MPAYLGGRFRTAGMKWYGSNIENRDKGLPRSILTFVLNDADTAAPLAFMSANLLSAYRTGAIPGVGARHLARKDSRIVGI
VGPGVMAKTTLMALIAACPMIDTVKIKGRGQASLDSFLSWLAVTFPQVTTVEVVDTVEAVVRGSDIVSYCNSGATGDPSQ
YPLVKREWVKPGTYLAMPALCNIDEGMERAEVRKVVDNAGLYEAWFEELPKPAHTHVPIIGVRFMDMIAEGKMAAEQLED
LGKIVAGQAPGRQNDDEIIIMSVGGMPVEDVAWGTVVYRNAIERGIGVKLNLWDVPVLR
>Mature_378_residues
TRDTKIDFIYLSEQDMIHAGVTDMPACVDTMEEMFGLLYHGDYRMAGANNDSHGAAVFFPEQSPFPDMPKPTADRRFMAM
PAYLGGRFRTAGMKWYGSNIENRDKGLPRSILTFVLNDADTAAPLAFMSANLLSAYRTGAIPGVGARHLARKDSRIVGIV
GPGVMAKTTLMALIAACPMIDTVKIKGRGQASLDSFLSWLAVTFPQVTTVEVVDTVEAVVRGSDIVSYCNSGATGDPSQY
PLVKREWVKPGTYLAMPALCNIDEGMERAEVRKVVDNAGLYEAWFEELPKPAHTHVPIIGVRFMDMIAEGKMAAEQLEDL
GKIVAGQAPGRQNDDEIIIMSVGGMPVEDVAWGTVVYRNAIERGIGVKLNLWDVPVLR

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 41396; Mature: 41265

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDTKIDFIYLSEQDMIHAGVTDMPACVDTMEEMFGLLYHGDYRMAGANNDSHGAAVFF
CCCCCEEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEC
PEQSPFPDMPKPTADRRFMAMPAYLGGRFRTAGMKWYGSNIENRDKGLPRSILTFVLNDA
CCCCCCCCCCCCCCCCEEEECHHHHCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHCCC
DTAAPLAFMSANLLSAYRTGAIPGVGARHLARKDSRIVGIVGPGVMAKTTLMALIAACPM
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCC
IDTVKIKGRGQASLDSFLSWLAVTFPQVTTVEVVDTVEAVVRGSDIVSYCNSGATGDPSQ
CEEEEECCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC
YPLVKREWVKPGTYLAMPALCNIDEGMERAEVRKVVDNAGLYEAWFEELPKPAHTHVPII
CCCHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCH
GVRFMDMIAEGKMAAEQLEDLGKIVAGQAPGRQNDDEIIIMSVGGMPVEDVAWGTVVYRN
HHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
AIERGIGVKLNLWDVPVLR
HHHHCCCCEEEECCCCCCC
>Mature Secondary Structure 
TRDTKIDFIYLSEQDMIHAGVTDMPACVDTMEEMFGLLYHGDYRMAGANNDSHGAAVFF
CCCCEEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEC
PEQSPFPDMPKPTADRRFMAMPAYLGGRFRTAGMKWYGSNIENRDKGLPRSILTFVLNDA
CCCCCCCCCCCCCCCCEEEECHHHHCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHCCC
DTAAPLAFMSANLLSAYRTGAIPGVGARHLARKDSRIVGIVGPGVMAKTTLMALIAACPM
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCC
IDTVKIKGRGQASLDSFLSWLAVTFPQVTTVEVVDTVEAVVRGSDIVSYCNSGATGDPSQ
CEEEEECCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHHHHHCCCCCCCCCC
YPLVKREWVKPGTYLAMPALCNIDEGMERAEVRKVVDNAGLYEAWFEELPKPAHTHVPII
CCCHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCH
GVRFMDMIAEGKMAAEQLEDLGKIVAGQAPGRQNDDEIIIMSVGGMPVEDVAWGTVVYRN
HHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHH
AIERGIGVKLNLWDVPVLR
HHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]