| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yciE [H]
Identifier: 238023540
GI number: 238023540
Start: 46218
End: 46736
Strand: Reverse
Name: yciE [H]
Synonym: bglu_2g00410
Alternate gene names: 238023540
Gene position: 46736-46218 (Counterclockwise)
Preceding gene: 238023544
Following gene: 238023539
Centisome position: 1.65
GC content: 68.59
Gene sequence:
>519_bases ATGGCACATCCGAAACGCTCGATCGACGGGCATCTCGACGAATGGCTGCGCGACGCGCATGCGATGGAAGAACAGGCGAG CACCATGCTCGCCGCGATGGCCCGGCGCCTCGAGCCCTATCCCGACCTGAAGCAGCGCATCGAGCAGCATCTGGGCGAGA CGCGCGAGCAGCTCCGGCTGATTCGCGAATGCATCGGGCGGCGCGGCAGCGAGGTGTCGGCGCTGAAGGATCTGGGCGCG CGCGGGCTGGCCGCGCTGCAAGGGTTTGCCGGCATGCTGGCGGCCGACGAGGTGGTCAAGGGCGTGATCGCATGCCATGC GTTCGAGAACTTCGAGATCGCGACCTACCGCGCGCTGATCACGGCCGCGCGCATGGTCGGCGACGTCGAGACGATCACCG TGTGCGAGCGGATTCTGCCGCAGGAGGTGGCGATGGCGAACTGGCTGGAGCAGCATCTGCCGCAAGTGGTCAGCGCGTTC CTGGCGCGCAACCCGGAGCGCGCGGCGGCCTCGCGCTGA
Upstream 100 bases:
>100_bases GCGGGCGCGGGCGCGGGCGCGCCGCTTGCATCGCGCCATGCGTCCCGCCGCACCTCAAGCCGTTTCCCTTCCGACGAGGC GCGCGGATCAGGAGCACGAC
Downstream 100 bases:
>100_bases GTGCCCGCGCCGCGCCGGCCCAGGTGCCGTCGCCTCGCCCGCGGCGCGAAGCGGCAGGTCGAATCCTTCAAACAGGTGCA AAAACCGCGCATGCCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MAHPKRSIDGHLDEWLRDAHAMEEQASTMLAAMARRLEPYPDLKQRIEQHLGETREQLRLIRECIGRRGSEVSALKDLGA RGLAALQGFAGMLAADEVVKGVIACHAFENFEIATYRALITAARMVGDVETITVCERILPQEVAMANWLEQHLPQVVSAF LARNPERAAASR
Sequences:
>Translated_172_residues MAHPKRSIDGHLDEWLRDAHAMEEQASTMLAAMARRLEPYPDLKQRIEQHLGETREQLRLIRECIGRRGSEVSALKDLGA RGLAALQGFAGMLAADEVVKGVIACHAFENFEIATYRALITAARMVGDVETITVCERILPQEVAMANWLEQHLPQVVSAF LARNPERAAASR >Mature_171_residues AHPKRSIDGHLDEWLRDAHAMEEQASTMLAAMARRLEPYPDLKQRIEQHLGETREQLRLIRECIGRRGSEVSALKDLGAR GLAALQGFAGMLAADEVVKGVIACHAFENFEIATYRALITAARMVGDVETITVCERILPQEVAMANWLEQHLPQVVSAFL ARNPERAAASR
Specific function: Unknown
COG id: COG3685
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787511, Length=154, Percent_Identity=44.8051948051948, Blast_Score=145, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010287 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF05974 DUF892 [H]
EC number: NA
Molecular weight: Translated: 19140; Mature: 19009
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPKRSIDGHLDEWLRDAHAMEEQASTMLAAMARRLEPYPDLKQRIEQHLGETREQLRL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IRECIGRRGSEVSALKDLGARGLAALQGFAGMLAADEVVKGVIACHAFENFEIATYRALI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TAARMVGDVETITVCERILPQEVAMANWLEQHLPQVVSAFLARNPERAAASR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC >Mature Secondary Structure AHPKRSIDGHLDEWLRDAHAMEEQASTMLAAMARRLEPYPDLKQRIEQHLGETREQLRL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IRECIGRRGSEVSALKDLGARGLAALQGFAGMLAADEVVKGVIACHAFENFEIATYRALI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TAARMVGDVETITVCERILPQEVAMANWLEQHLPQVVSAFLARNPERAAASR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3058546; 9097039; 9278503; 8455549 [H]