| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023544
Identifier: 238023544
GI number: 238023544
Start: 48936
End: 50258
Strand: Reverse
Name: 238023544
Synonym: bglu_2g00450
Alternate gene names: NA
Gene position: 50258-48936 (Counterclockwise)
Preceding gene: 238023550
Following gene: 238023540
Centisome position: 1.78
GC content: 71.66
Gene sequence:
>1323_bases ATGCTGCATGAAACCGAGTGGTACCTGATCGTCGGCGGCGTGTTCATCGCAGTCGGCTTTGCCGGCTCGGCGCTGAGCCA GCTGCCGTGCAGCACCGCCATGATCTATCTGGCGGTGGGCGCGCTGCTCGGGCCGGCCGGCATTGGCCTGATGCAGCTCG ATCTAGCGCGCGACGCACCGCTGCTGCGCCACGTGACCGAGATCGCGCTGCTGGTCTCGCTGTTCGCGATCGGACTGCGC CTGCGGCTGCCCTCGCTCGACCGTCTCTGGCTGCTGCCGGTGCGGCTCGGGTTCGTGGCGATGCTCGTGACGGTGCCGCT GGTCGCAGCGGTTGCGACCGTCGCACTCGGCCTCGGCTGGGGGCCGGCGCTGCTGCTGGCCGCGATGCTTTCGCCCACCG ATCCGGTGCTCGCCCACGACGTGCAGGTGCGCAGCCCGGGCGACGTCGATCTGGTGCGCTTCGCGCTATCGGGCGAGGGC GGCCTGAACGACGGCATCGCGCTGCCCTTCGTGCTGGCGGGGCTCGCGCTATGCGGCGACACGGCCTCGACGGGGGGCGC GGCGCCGGGCTCGGCGGCGTTCCTGGCCGAACTGGCGTGGGGCATCGCGGGCGCGCTCGCGATCGGCGCGGGGCTTGGCT GGATCACTACCCACGGTGTCGCCTGGCTGCGTACCCGCCATGCGCAGGCGCTCGGGCTGGAGGGTTTCTTCGCGCTCGGG CTGATCGTGATCGCGTTCGGCGTGGCGCAGTATGCCCAGACCTTCGGCTTCCTGGCCGTGTTCGCGGCCGGCGTCGCGAT GCGGCGCGTCGAGCACCGCGCGAGCGGGCCGAGCGCGCCGCGCGAGGTGATCGGCACGATCGACTCGACCGACGTGAGCG CCACCGAGCGCGACCCGGCCAAGGCCCACGCCTACATGGCCGAATCGGTGCTCGGCTTCACCATCGAGCTGGAGCGGATC GCCGAGGCGGTGGTGATGACGCTGGTGGGCGGCGCGCTCGCCACGCTCTCGCTGGCCGCATTCAGCTGGCCGATGCTGGC GCTGGCGGCCGCGCTGGTGCTGCTGATCCGGCCGCTCGCGGTGGCGCTCTCGCTGGTCCGCTCGCCCACCACGGCAACCC AGCGCCGGCTGATCGGCTGGTTCGGGATTCGCGGCATCGGTTCGTTCTACTACCTGCTGTTCGCCATCGAGCGGCGCCCC GACGCGGCGCTGCCGCTGGTGCCGGTGGTGCTCGGCATCGTGACGCTGTCGGTGATCGTGCATGGCATGTCGGCCACGCC GCTGATGAACTGGTATCACCGCTTCTCGCGCTCGAGCCGCTGA
Upstream 100 bases:
>100_bases CGCGTGCGCGCGATACTGCCCCGCACGCGAGCCCATTCACCCTCGGCCGGCAAGCCGCGCGCTTCGTGCCGCGTCGCCCG GCCGCTTATCCGGAGCCTCG
Downstream 100 bases:
>100_bases GGCGCGCGCAACGAAAAACGGCGCGGCTCGGCATCTAGCCGGCCGCGCCGCGCGTTGCAGCGCCGCCGCCGCGCGCCGCC CCAGCGGGCGCGCGGCGGCG
Product: Na+/H+ antiporter-like protein
Products: NA
Alternate protein names: Na+/H+ Antiporter; Sodium/Hydrogen Exchanger Family Protein; Na+/H+ Antiporter-Like Protein; Na(+)/H(+) Antiporter; Cation Transport Related Protein; CPA1 Family Na(+)/H(+) Antiporter; CPA1 Family Na+/H+ Antiporter; NhaP-Type Na+/H+ And K+/H+ Antiporter
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MLHETEWYLIVGGVFIAVGFAGSALSQLPCSTAMIYLAVGALLGPAGIGLMQLDLARDAPLLRHVTEIALLVSLFAIGLR LRLPSLDRLWLLPVRLGFVAMLVTVPLVAAVATVALGLGWGPALLLAAMLSPTDPVLAHDVQVRSPGDVDLVRFALSGEG GLNDGIALPFVLAGLALCGDTASTGGAAPGSAAFLAELAWGIAGALAIGAGLGWITTHGVAWLRTRHAQALGLEGFFALG LIVIAFGVAQYAQTFGFLAVFAAGVAMRRVEHRASGPSAPREVIGTIDSTDVSATERDPAKAHAYMAESVLGFTIELERI AEAVVMTLVGGALATLSLAAFSWPMLALAAALVLLIRPLAVALSLVRSPTTATQRRLIGWFGIRGIGSFYYLLFAIERRP DAALPLVPVVLGIVTLSVIVHGMSATPLMNWYHRFSRSSR
Sequences:
>Translated_440_residues MLHETEWYLIVGGVFIAVGFAGSALSQLPCSTAMIYLAVGALLGPAGIGLMQLDLARDAPLLRHVTEIALLVSLFAIGLR LRLPSLDRLWLLPVRLGFVAMLVTVPLVAAVATVALGLGWGPALLLAAMLSPTDPVLAHDVQVRSPGDVDLVRFALSGEG GLNDGIALPFVLAGLALCGDTASTGGAAPGSAAFLAELAWGIAGALAIGAGLGWITTHGVAWLRTRHAQALGLEGFFALG LIVIAFGVAQYAQTFGFLAVFAAGVAMRRVEHRASGPSAPREVIGTIDSTDVSATERDPAKAHAYMAESVLGFTIELERI AEAVVMTLVGGALATLSLAAFSWPMLALAAALVLLIRPLAVALSLVRSPTTATQRRLIGWFGIRGIGSFYYLLFAIERRP DAALPLVPVVLGIVTLSVIVHGMSATPLMNWYHRFSRSSR >Mature_440_residues MLHETEWYLIVGGVFIAVGFAGSALSQLPCSTAMIYLAVGALLGPAGIGLMQLDLARDAPLLRHVTEIALLVSLFAIGLR LRLPSLDRLWLLPVRLGFVAMLVTVPLVAAVATVALGLGWGPALLLAAMLSPTDPVLAHDVQVRSPGDVDLVRFALSGEG GLNDGIALPFVLAGLALCGDTASTGGAAPGSAAFLAELAWGIAGALAIGAGLGWITTHGVAWLRTRHAQALGLEGFFALG LIVIAFGVAQYAQTFGFLAVFAAGVAMRRVEHRASGPSAPREVIGTIDSTDVSATERDPAKAHAYMAESVLGFTIELERI AEAVVMTLVGGALATLSLAAFSWPMLALAAALVLLIRPLAVALSLVRSPTTATQRRLIGWFGIRGIGSFYYLLFAIERRP DAALPLVPVVLGIVTLSVIVHGMSATPLMNWYHRFSRSSR
Specific function: Unknown
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45976; Mature: 45976
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHETEWYLIVGGVFIAVGFAGSALSQLPCSTAMIYLAVGALLGPAGIGLMQLDLARDAP CCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCH LLRHVTEIALLVSLFAIGLRLRLPSLDRLWLLPVRLGFVAMLVTVPLVAAVATVALGLGW HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GPALLLAAMLSPTDPVLAHDVQVRSPGDVDLVRFALSGEGGLNDGIALPFVLAGLALCGD HHHHHHHHHHCCCCCCCCCCEEECCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCC TASTGGAAPGSAAFLAELAWGIAGALAIGAGLGWITTHGVAWLRTRHAQALGLEGFFALG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHH LIVIAFGVAQYAQTFGFLAVFAAGVAMRRVEHRASGPSAPREVIGTIDSTDVSATERDPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCHH KAHAYMAESVLGFTIELERIAEAVVMTLVGGALATLSLAAFSWPMLALAAALVLLIRPLA HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALSLVRSPTTATQRRLIGWFGIRGIGSFYYLLFAIERRPDAALPLVPVVLGIVTLSVIV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH HGMSATPLMNWYHRFSRSSR HCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MLHETEWYLIVGGVFIAVGFAGSALSQLPCSTAMIYLAVGALLGPAGIGLMQLDLARDAP CCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCH LLRHVTEIALLVSLFAIGLRLRLPSLDRLWLLPVRLGFVAMLVTVPLVAAVATVALGLGW HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GPALLLAAMLSPTDPVLAHDVQVRSPGDVDLVRFALSGEGGLNDGIALPFVLAGLALCGD HHHHHHHHHHCCCCCCCCCCEEECCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCC TASTGGAAPGSAAFLAELAWGIAGALAIGAGLGWITTHGVAWLRTRHAQALGLEGFFALG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCHHHHHHH LIVIAFGVAQYAQTFGFLAVFAAGVAMRRVEHRASGPSAPREVIGTIDSTDVSATERDPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCHH KAHAYMAESVLGFTIELERIAEAVVMTLVGGALATLSLAAFSWPMLALAAALVLLIRPLA HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALSLVRSPTTATQRRLIGWFGIRGIGSFYYLLFAIERRPDAALPLVPVVLGIVTLSVIV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH HGMSATPLMNWYHRFSRSSR HCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA