| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023529
Identifier: 238023529
GI number: 238023529
Start: 31505
End: 31885
Strand: Reverse
Name: 238023529
Synonym: bglu_2g00300
Alternate gene names: NA
Gene position: 31885-31505 (Counterclockwise)
Preceding gene: 238023530
Following gene: 238023528
Centisome position: 1.13
GC content: 72.18
Gene sequence:
>381_bases ATGAGCGCATCCCCTTCCCCCCGCCCGGCCTCGCACGCGAAGCCGGGCTCGCGCGGCAAGCATTCGACACGGCGCCCCGG CCGGCGCCGCGCCAGCACCACCGGCTCGGGCAAGCGCTGGTCCGGCGAGGTCACGCGCCGCAGCGACGCACTCGACGTCG AGCCCGACATCTTCAAGTCCGACGACCCCGCGACGATCGCCGCCTCGCTGAAACGCTCGGCCGAGCACAGCCGGCGGCGC AAGGCATCGCCCTACCAGTCGGCCATGTCGATGCTGAACTTCTACGTCAACCGCGCCGGCCGCAAGCTGCCGAAAACGCG GCGGGCAACGCTGGAGCGCGCCAAGCGCAAGCTGCGCGAGGCGTTCGGCCGAAAGCCCTGA
Upstream 100 bases:
>100_bases GTCCTGCCCGCCTGCCCTGTTGCCATGCGGGCCATTGGAGAGCGGCCGGTCCCGTCATCGGCCCTCCCCTCCTTACCCCC TCATCCCGGAGGCTCCCACC
Downstream 100 bases:
>100_bases GGCCGGCCCGCGGCCACGCGCCAAACTTCGCATGGCGCGCGCGGGATTCGCCTCGTGCGCGACGCCAGCGGCGCGCTGCG TTATACCTTTGGGCCGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSASPSPRPASHAKPGSRGKHSTRRPGRRRASTTGSGKRWSGEVTRRSDALDVEPDIFKSDDPATIAASLKRSAEHSRRR KASPYQSAMSMLNFYVNRAGRKLPKTRRATLERAKRKLREAFGRKP
Sequences:
>Translated_126_residues MSASPSPRPASHAKPGSRGKHSTRRPGRRRASTTGSGKRWSGEVTRRSDALDVEPDIFKSDDPATIAASLKRSAEHSRRR KASPYQSAMSMLNFYVNRAGRKLPKTRRATLERAKRKLREAFGRKP >Mature_125_residues SASPSPRPASHAKPGSRGKHSTRRPGRRRASTTGSGKRWSGEVTRRSDALDVEPDIFKSDDPATIAASLKRSAEHSRRRK ASPYQSAMSMLNFYVNRAGRKLPKTRRATLERAKRKLREAFGRKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14085; Mature: 13954
Theoretical pI: Translated: 12.36; Mature: 12.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASPSPRPASHAKPGSRGKHSTRRPGRRRASTTGSGKRWSGEVTRRSDALDVEPDIFKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC DDPATIAASLKRSAEHSRRRKASPYQSAMSMLNFYVNRAGRKLPKTRRATLERAKRKLRE CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AFGRKP HHCCCC >Mature Secondary Structure SASPSPRPASHAKPGSRGKHSTRRPGRRRASTTGSGKRWSGEVTRRSDALDVEPDIFKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC DDPATIAASLKRSAEHSRRRKASPYQSAMSMLNFYVNRAGRKLPKTRRATLERAKRKLRE CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AFGRKP HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA