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The map label for this gene is xerD [C]

Identifier: 238023506

GI number: 238023506

Start: 7265

End: 8308

Strand: Reverse

Name: xerD [C]

Synonym: bglu_2g00060

Alternate gene names: 238023506

Gene position: 8308-7265 (Counterclockwise)

Preceding gene: 238023507

Following gene: 238023504

Centisome position: 0.29

GC content: 68.2

Gene sequence:

>1044_bases
ATGTCCCTCCCAAGCGCCGGCGCCCCCGGAACGCCAGAGGCCGCCGAACCCGACCTGTTCGACGGCACCGAGGCCGACTG
GGTTGCCCAACCGAACGCGTCGTTCGACGCGTGGCTCGCCACCCAGGCGTTTCGCCGTTCGTCGGCCGACGTCTATCGCG
CCCAATGGGGCGCGTTCCTGGCCTGGCTCGCCGAACGGCAGCAGACGCTCGCAACCGTCGACACCCAGTCGATCGCGAAT
TTCGTCGGCGAGCTGCCGATCCGGAAAACGCAGCGCGTGCGCTATCTGCGGCTGATCGAGCGCGTCCTCGATCACGTCCG
CCGCAACGAGTTCGGCTCGACCAATCCGGCGCGCTTCATTGCTCAGGATGGCGAAGCAAGCTGGCGCCGCGCGCGTGACA
ACGAGCCCACCAGCTTTCTCTCGCCGTCCGAGCGCGCGGCCCTGCTCGCCTACCTGTTCTCACCCTTGCCGTCGGTCGGC
GCATCGCAATGGAAAGAGCGCCGCGATCGGGCGCTGGTAGCCGCCTTCCTCGGCGGCGGATTGAAGACGGGCGAAGCGCG
AGTGCTTACCATTAGTTGCGTGAAACCGGGCGAGCCCGCCGTGCGGATTCCGTCCAACCATCCCGACTTCGAACGCGAAA
CGCATCTGGCCTCGTTCGCGATCGCCTTGTTCGACGCGTGGCTGGCCGAGCGGCGCCGCTGCGAGATTCCCGGCGATCTG
GTATTCCCGTCCTCGCTCGCGGGCCGGCCGATGCACAAGGCGACCATGCTACGCGCGGTCGATGCGATCATCGAAGCGGC
CGATATCACCGCGTCTCGCGTCGAGCGCGCGAGCCCGCAGACCCTGCGCAACACGTTTGCTGCGGAATTGTTCGAGAACG
GCGTCGCGCCCGAGCGCGTCGGCCACTGGCTCGGCTTCATGCAGGCCGTATCCGCGAACCGCCTGCATCGCGCGTGGCGA
AGCTGGCGCGACAACCTGGAAAAAGCCGCCGCCAGCCACGGCGAAACGGCGGCGTCATCGGCCCCGCAGCCCGGCCTGGT
CTGA

Upstream 100 bases:

>100_bases
CCGGGGGCTCAGGCCGGCCGTCGGACGCGCCAAGGCCATCGCCTGGCCAGGGCCGGCTGCATGCCCTACGCTCAAACAAG
CAACTAACGGATTAATTGAC

Downstream 100 bases:

>100_bases
GCGCGTGAGTTTTTCGCTCCCGCAGGTCCTCACCTTTTCCCTCCCGTTTCCCCTCACCTTTCGCGCAACCCGCCACGGCG
CCGGTCAGCCGGCGCCGCCG

Product: Site-specific recombinase, phage integrase family

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Integrase/Recombinase Protein; Integrase/Recombinase; DNA Integration/Recombination/Inversion Protein; Integrase; Phage Integrase / Tyr Recombinase Protein; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Or Site-Specific Recombinase

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSLPSAGAPGTPEAAEPDLFDGTEADWVAQPNASFDAWLATQAFRRSSADVYRAQWGAFLAWLAERQQTLATVDTQSIAN
FVGELPIRKTQRVRYLRLIERVLDHVRRNEFGSTNPARFIAQDGEASWRRARDNEPTSFLSPSERAALLAYLFSPLPSVG
ASQWKERRDRALVAAFLGGGLKTGEARVLTISCVKPGEPAVRIPSNHPDFERETHLASFAIALFDAWLAERRRCEIPGDL
VFPSSLAGRPMHKATMLRAVDAIIEAADITASRVERASPQTLRNTFAAELFENGVAPERVGHWLGFMQAVSANRLHRAWR
SWRDNLEKAAASHGETAASSAPQPGLV

Sequences:

>Translated_347_residues
MSLPSAGAPGTPEAAEPDLFDGTEADWVAQPNASFDAWLATQAFRRSSADVYRAQWGAFLAWLAERQQTLATVDTQSIAN
FVGELPIRKTQRVRYLRLIERVLDHVRRNEFGSTNPARFIAQDGEASWRRARDNEPTSFLSPSERAALLAYLFSPLPSVG
ASQWKERRDRALVAAFLGGGLKTGEARVLTISCVKPGEPAVRIPSNHPDFERETHLASFAIALFDAWLAERRRCEIPGDL
VFPSSLAGRPMHKATMLRAVDAIIEAADITASRVERASPQTLRNTFAAELFENGVAPERVGHWLGFMQAVSANRLHRAWR
SWRDNLEKAAASHGETAASSAPQPGLV
>Mature_346_residues
SLPSAGAPGTPEAAEPDLFDGTEADWVAQPNASFDAWLATQAFRRSSADVYRAQWGAFLAWLAERQQTLATVDTQSIANF
VGELPIRKTQRVRYLRLIERVLDHVRRNEFGSTNPARFIAQDGEASWRRARDNEPTSFLSPSERAALLAYLFSPLPSVGA
SQWKERRDRALVAAFLGGGLKTGEARVLTISCVKPGEPAVRIPSNHPDFERETHLASFAIALFDAWLAERRRCEIPGDLV
FPSSLAGRPMHKATMLRAVDAIIEAADITASRVERASPQTLRNTFAAELFENGVAPERVGHWLGFMQAVSANRLHRAWRS
WRDNLEKAAASHGETAASSAPQPGLV

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerc Binding Sites By A Short Central Region, Forming

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38223; Mature: 38092

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPSAGAPGTPEAAEPDLFDGTEADWVAQPNASFDAWLATQAFRRSSADVYRAQWGAFL
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
AWLAERQQTLATVDTQSIANFVGELPIRKTQRVRYLRLIERVLDHVRRNEFGSTNPARFI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHE
AQDGEASWRRARDNEPTSFLSPSERAALLAYLFSPLPSVGASQWKERRDRALVAAFLGGG
ECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
LKTGEARVLTISCVKPGEPAVRIPSNHPDFERETHLASFAIALFDAWLAERRRCEIPGDL
CCCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VFPSSLAGRPMHKATMLRAVDAIIEAADITASRVERASPQTLRNTFAAELFENGVAPERV
ECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH
GHWLGFMQAVSANRLHRAWRSWRDNLEKAAASHGETAASSAPQPGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC
>Mature Secondary Structure 
SLPSAGAPGTPEAAEPDLFDGTEADWVAQPNASFDAWLATQAFRRSSADVYRAQWGAFL
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
AWLAERQQTLATVDTQSIANFVGELPIRKTQRVRYLRLIERVLDHVRRNEFGSTNPARFI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHE
AQDGEASWRRARDNEPTSFLSPSERAALLAYLFSPLPSVGASQWKERRDRALVAAFLGGG
ECCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
LKTGEARVLTISCVKPGEPAVRIPSNHPDFERETHLASFAIALFDAWLAERRRCEIPGDL
CCCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VFPSSLAGRPMHKATMLRAVDAIIEAADITASRVERASPQTLRNTFAAELFENGVAPERV
ECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH
GHWLGFMQAVSANRLHRAWRSWRDNLEKAAASHGETAASSAPQPGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA