| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023504
Identifier: 238023504
GI number: 238023504
Start: 2193
End: 3572
Strand: Reverse
Name: 238023504
Synonym: bglu_2g00030
Alternate gene names: NA
Gene position: 3572-2193 (Counterclockwise)
Preceding gene: 238023506
Following gene: NA
Centisome position: 0.13
GC content: 65.72
Gene sequence:
>1380_bases ATGGCCACCAAGCGCGCGAAGAAAACCGATGTCGATGTGGTGAACGCCAGCTCCGCCGAACTGCGAAAGGCGGTCGAGGC GATCGCCATCCAGCCGAAGAGCGGCAAGATCACGCTGCTGACCCGCAAGCTCTTCAACGTTCTGCTCGCCGTGGCGCAGC AGGCCGACGATTCCGGCGACACGTATCGTGCGCTGCTGTCCGACATCGTCGCAAACTCCGCCTTTGATTCGAACGACACC GCGCTCGTCAAGGAACACCTGCGGCGCATGGTGTCGGTGCAGGTGGAATGGAGCACCGGCACGTCGAGCCAGAAGCCGGG CCGCAAGTGGGGCATCTCGACGCTGATCGCCGACGCGGAAATTCTCGAGGATCCGGCCACGCGCCGCGTCTGGGTCGAAT TCTCATTCGCGCCGAAGATCAAGAAGAAGCTGCTGGACCCGGTGCAGTACGCGCGCCTGAGCCTGCAGTTCCAGAGCCAG CTGCGCAGCAGCGCAGGCCTCGCCCTCTATGAGATCTGCGTGCGCTACCTGACGAACCCGAGCCATCTGACGATGCGCGA GCCGTGGGAATGGTGGCGCCCGATCCTGTCGGGAACCCCCGACACCGAGGCCGGCGACGAGGCCAAGCGCGAGTACAAGT ACTTCAAGCGCGATTATCTGCGCCCGGCAATCGCCGAGGTCAACGCCGTCACGAACATCTTCGTCGAATTGATCGAACAC CGTGAAGGGCGCCGCGTGGCCGAGATCCAGTTCCGCGTGTCCGAGCGCAAGCAGCCGATGCTCGCGCTCGACGAGCATCC GAACGTGTTCGACAGCACGCTCGTGGACCGGATGGTGAAGATCGGCATCCCGCTGAAGGAAGCGCAGACGCTCTATGCCG ATAGCGAGGAAAACCGGATTCGCGCGGCACTGCAGATGACCGAGCAGCGCATGCGCAGCACGACGCTGCCGCCGGTGCGC AGCGCGGCGGCACTGTTCAAGGATGCGTTGAAGAAGGGGTACGCGCCGCCCGTGGCCGAGCCTGCCGATGCGCTGCCGGG CGGCACCGCGGGCAAGCTGGCCGCGGTGGCGTCGGCAACCGGCGTGGCCGACGATCCGAAGGCGCGCCTGCGCGGCGAGT ACGACGCGTACCGCCGCAAGGAGGCGAAGGCCTTGTATGAGGAACAGGGCGAGGCCGAGCGCGAACTCGCGCGCACGTCG TTCGAGAGCGACGTGCTGCCGGCGCTCGGCTCGCATTTGCGTGACGACTGGCGCCGGCGCGGCCTCGACTCGAAACTCGT CGAAACCGCGTTTTTCGACTGGCTGGCGCTGAAAACTTGGGGCGAGCCGACCGACGGTGATCTGCTCGCATTCACGCTGA ATCAGTCGCGCGCGGCTTGA
Upstream 100 bases:
>100_bases GAATCGTCCCGCTTCACCGCCTACGGTGAGGTCTCGCTTATAGACGCCCATCACCACAGCCGCTATTCTTCCGGGAACCT TTCCCTCTCCGACCCGACGC
Downstream 100 bases:
>100_bases GCAGGCAGGCGGTCGCGCGCGCGCGGCCTTGTCGCTTACGCCCGGAATTTTTTGAAAAGCCGAATCTGTATTGAACAGGT TCGGCTTTTTTGTTTTGGCC
Product: putative plasmid replication protein
Products: NA
Alternate protein names: Replication Protein; Plasmid Replication Protein; Plasmid Replication Initiation Protein
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MATKRAKKTDVDVVNASSAELRKAVEAIAIQPKSGKITLLTRKLFNVLLAVAQQADDSGDTYRALLSDIVANSAFDSNDT ALVKEHLRRMVSVQVEWSTGTSSQKPGRKWGISTLIADAEILEDPATRRVWVEFSFAPKIKKKLLDPVQYARLSLQFQSQ LRSSAGLALYEICVRYLTNPSHLTMREPWEWWRPILSGTPDTEAGDEAKREYKYFKRDYLRPAIAEVNAVTNIFVELIEH REGRRVAEIQFRVSERKQPMLALDEHPNVFDSTLVDRMVKIGIPLKEAQTLYADSEENRIRAALQMTEQRMRSTTLPPVR SAAALFKDALKKGYAPPVAEPADALPGGTAGKLAAVASATGVADDPKARLRGEYDAYRRKEAKALYEEQGEAERELARTS FESDVLPALGSHLRDDWRRRGLDSKLVETAFFDWLALKTWGEPTDGDLLAFTLNQSRAA
Sequences:
>Translated_459_residues MATKRAKKTDVDVVNASSAELRKAVEAIAIQPKSGKITLLTRKLFNVLLAVAQQADDSGDTYRALLSDIVANSAFDSNDT ALVKEHLRRMVSVQVEWSTGTSSQKPGRKWGISTLIADAEILEDPATRRVWVEFSFAPKIKKKLLDPVQYARLSLQFQSQ LRSSAGLALYEICVRYLTNPSHLTMREPWEWWRPILSGTPDTEAGDEAKREYKYFKRDYLRPAIAEVNAVTNIFVELIEH REGRRVAEIQFRVSERKQPMLALDEHPNVFDSTLVDRMVKIGIPLKEAQTLYADSEENRIRAALQMTEQRMRSTTLPPVR SAAALFKDALKKGYAPPVAEPADALPGGTAGKLAAVASATGVADDPKARLRGEYDAYRRKEAKALYEEQGEAERELARTS FESDVLPALGSHLRDDWRRRGLDSKLVETAFFDWLALKTWGEPTDGDLLAFTLNQSRAA >Mature_458_residues ATKRAKKTDVDVVNASSAELRKAVEAIAIQPKSGKITLLTRKLFNVLLAVAQQADDSGDTYRALLSDIVANSAFDSNDTA LVKEHLRRMVSVQVEWSTGTSSQKPGRKWGISTLIADAEILEDPATRRVWVEFSFAPKIKKKLLDPVQYARLSLQFQSQL RSSAGLALYEICVRYLTNPSHLTMREPWEWWRPILSGTPDTEAGDEAKREYKYFKRDYLRPAIAEVNAVTNIFVELIEHR EGRRVAEIQFRVSERKQPMLALDEHPNVFDSTLVDRMVKIGIPLKEAQTLYADSEENRIRAALQMTEQRMRSTTLPPVRS AAALFKDALKKGYAPPVAEPADALPGGTAGKLAAVASATGVADDPKARLRGEYDAYRRKEAKALYEEQGEAERELARTSF ESDVLPALGSHLRDDWRRRGLDSKLVETAFFDWLALKTWGEPTDGDLLAFTLNQSRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51421; Mature: 51290
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKRAKKTDVDVVNASSAELRKAVEAIAIQPKSGKITLLTRKLFNVLLAVAQQADDSGD CCCCCCCCCCCCEECCCHHHHHHHHHHHEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCH TYRALLSDIVANSAFDSNDTALVKEHLRRMVSVQVEWSTGTSSQKPGRKWGISTLIADAE HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHH ILEDPATRRVWVEFSFAPKIKKKLLDPVQYARLSLQFQSQLRSSAGLALYEICVRYLTNP HHCCCCCCEEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC SHLTMREPWEWWRPILSGTPDTEAGDEAKREYKYFKRDYLRPAIAEVNAVTNIFVELIEH CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH REGRRVAEIQFRVSERKQPMLALDEHPNVFDSTLVDRMVKIGIPLKEAQTLYADSEENRI CCCCEEEHHEEEHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHH RAALQMTEQRMRSTTLPPVRSAAALFKDALKKGYAPPVAEPADALPGGTAGKLAAVASAT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHC GVADDPKARLRGEYDAYRRKEAKALYEEQGEAERELARTSFESDVLPALGSHLRDDWRRR CCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLDSKLVETAFFDWLALKTWGEPTDGDLLAFTLNQSRAA CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure ATKRAKKTDVDVVNASSAELRKAVEAIAIQPKSGKITLLTRKLFNVLLAVAQQADDSGD CCCCCCCCCCCEECCCHHHHHHHHHHHEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCH TYRALLSDIVANSAFDSNDTALVKEHLRRMVSVQVEWSTGTSSQKPGRKWGISTLIADAE HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHH ILEDPATRRVWVEFSFAPKIKKKLLDPVQYARLSLQFQSQLRSSAGLALYEICVRYLTNP HHCCCCCCEEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC SHLTMREPWEWWRPILSGTPDTEAGDEAKREYKYFKRDYLRPAIAEVNAVTNIFVELIEH CCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH REGRRVAEIQFRVSERKQPMLALDEHPNVFDSTLVDRMVKIGIPLKEAQTLYADSEENRI CCCCEEEHHEEEHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHH RAALQMTEQRMRSTTLPPVRSAAALFKDALKKGYAPPVAEPADALPGGTAGKLAAVASAT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHC GVADDPKARLRGEYDAYRRKEAKALYEEQGEAERELARTSFESDVLPALGSHLRDDWRRR CCCCCCHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLDSKLVETAFFDWLALKTWGEPTDGDLLAFTLNQSRAA CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA