Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237814455

Identifier: 237814455

GI number: 237814455

Start: 4073866

End: 4075053

Strand: Direct

Name: 237814455

Synonym: GBP346_A4253

Alternate gene names: NA

Gene position: 4073866-4075053 (Clockwise)

Preceding gene: 237814454

Following gene: 237814461

Centisome position: 99.4

GC content: 70.12

Gene sequence:

>1188_bases
ATGAAGCAGGACGCATTCATCCAGCGGTTGCGGCAGGCGCTCGGCAGCCTGCCGAAACGGGACGTCGACGAGATCGTCGC
CGATTACCGCGAGTACATCGGCGACGCGCTCTCGGCCGGGCGCACCGAGGAAGACGTGATCGCCGCGCTCGGTGAACCGG
AGAAGCTCGCGCGCGAGCTGAAGGCGCAGGCGAATTTCCGCCAATGGGAGGAGCGGCGCTCGTTCGGCAATCTGATGCGC
GTGGTCGGCTCGATCGCGGGCCTCGGGCTGCTGCACCTGGTCCTGCTCGTGCCGTTCCTGCTGTACATGCTCGTGCTGAC
GCTGGGCTACGTGTTCTTCGGCGCGCTGACGGTGGCGGGCCTCGTCACGCTCGTCGCGTTCGGCAGTCACTACGTGTTCG
GCACGCCCGTGCCGGGCGTCCTGCCGTTCGGCGGCGGCGCGGCGCAGCTCGGCGCGGCCGGCGCTTCGGGCAAGGCGGAC
GGCAAGGGCGCGACGGACGGCAAGGCCGCGCAGACCGGCAAGATCGCGCAGGATCCGAAGAGCGCGAGCGCCGCGGCCGC
CGATGCGCTGAACGACGCGAAGGAGCTGCGTGTCGAGGGCGAGCGCTACGTGCTCGACTTGCACGACGGCAGCCGCGTGT
CGATCGTCACGCGCAAGGGCGTGATCGATGCGCGCAAGCAGGGCGGCAAGCTGTCGATCGACGCGACGGGCGATGGCGCG
CGCGAGCTGCTCACGACGGGCAAGGACGACACGCTCGGCATCGCGCGCGCCGACGTGATCGCGCTCGATCTGAAGAGCGC
GAACGGCGACCAGATGACGGTGGCGAACACGGGCGGATCGGTGCCGGGCGTGAACGTGCCCGGCATCGCGGGCGGCAACG
TGCAGATGACGCCGGATGGCCGCGGCGGCATGAACCTGTCGGTGACGAACGGCGAGAATTCGGTATCGATCGTCGGCGGC
CGGATCACCGTCGACAACGGCAAGCAGCACGTGAGCGTTGCCGCACCGGCCGGGTTCGCGCTCGGCGGCATCGCGTTCGG
CTACGGGCTCGCGATGCTGCCGATCGGGATCGTCGGGCTGCTCGTGTGCGTCTGGTTGACGCGGGTCACGTGGCGCGCGC
TCGGGCGGTACGTGAGGCGGCGGATCGATGCGGTATCGGCGAAGCTCGAGCGGGAGCGGGCGAACTGA

Upstream 100 bases:

>100_bases
CGAGCCTGCGGCAGATGGAAGACGAGTGGCGGAGTTTCGTCGACGAAGTCAACGGCGTGCTGGCGTTGCACGGCACGCGA
GCGGACGGAGAGGAACGGCA

Downstream 100 bases:

>100_bases
AGTTCCGCGGCTCGGCCGGGTTTTACCTTCGAAAGGACAAGGGCGTTCGGGCGAATACCGGGCGCCCTTTTTTTGTTCCG
TGAAGCAGCAGTGCCAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKQDAFIQRLRQALGSLPKRDVDEIVADYREYIGDALSAGRTEEDVIAALGEPEKLARELKAQANFRQWEERRSFGNLMR
VVGSIAGLGLLHLVLLVPFLLYMLVLTLGYVFFGALTVAGLVTLVAFGSHYVFGTPVPGVLPFGGGAAQLGAAGASGKAD
GKGATDGKAAQTGKIAQDPKSASAAAADALNDAKELRVEGERYVLDLHDGSRVSIVTRKGVIDARKQGGKLSIDATGDGA
RELLTTGKDDTLGIARADVIALDLKSANGDQMTVANTGGSVPGVNVPGIAGGNVQMTPDGRGGMNLSVTNGENSVSIVGG
RITVDNGKQHVSVAAPAGFALGGIAFGYGLAMLPIGIVGLLVCVWLTRVTWRALGRYVRRRIDAVSAKLERERAN

Sequences:

>Translated_395_residues
MKQDAFIQRLRQALGSLPKRDVDEIVADYREYIGDALSAGRTEEDVIAALGEPEKLARELKAQANFRQWEERRSFGNLMR
VVGSIAGLGLLHLVLLVPFLLYMLVLTLGYVFFGALTVAGLVTLVAFGSHYVFGTPVPGVLPFGGGAAQLGAAGASGKAD
GKGATDGKAAQTGKIAQDPKSASAAAADALNDAKELRVEGERYVLDLHDGSRVSIVTRKGVIDARKQGGKLSIDATGDGA
RELLTTGKDDTLGIARADVIALDLKSANGDQMTVANTGGSVPGVNVPGIAGGNVQMTPDGRGGMNLSVTNGENSVSIVGG
RITVDNGKQHVSVAAPAGFALGGIAFGYGLAMLPIGIVGLLVCVWLTRVTWRALGRYVRRRIDAVSAKLERERAN
>Mature_395_residues
MKQDAFIQRLRQALGSLPKRDVDEIVADYREYIGDALSAGRTEEDVIAALGEPEKLARELKAQANFRQWEERRSFGNLMR
VVGSIAGLGLLHLVLLVPFLLYMLVLTLGYVFFGALTVAGLVTLVAFGSHYVFGTPVPGVLPFGGGAAQLGAAGASGKAD
GKGATDGKAAQTGKIAQDPKSASAAAADALNDAKELRVEGERYVLDLHDGSRVSIVTRKGVIDARKQGGKLSIDATGDGA
RELLTTGKDDTLGIARADVIALDLKSANGDQMTVANTGGSVPGVNVPGIAGGNVQMTPDGRGGMNLSVTNGENSVSIVGG
RITVDNGKQHVSVAAPAGFALGGIAFGYGLAMLPIGIVGLLVCVWLTRVTWRALGRYVRRRIDAVSAKLERERAN

Specific function: Unknown

COG id: COG4709

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41218; Mature: 41218

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQDAFIQRLRQALGSLPKRDVDEIVADYREYIGDALSAGRTEEDVIAALGEPEKLAREL
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH
KAQANFRQWEERRSFGNLMRVVGSIAGLGLLHLVLLVPFLLYMLVLTLGYVFFGALTVAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVTLVAFGSHYVFGTPVPGVLPFGGGAAQLGAAGASGKADGKGATDGKAAQTGKIAQDPK
HHHHHHHCCCCEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SASAAAADALNDAKELRVEGERYVLDLHDGSRVSIVTRKGVIDARKQGGKLSIDATGDGA
HHHHHHHHHHHHHHHHEECCCEEEEECCCCCEEEEEEECCCHHHHHCCCEEEEECCCCCH
RELLTTGKDDTLGIARADVIALDLKSANGDQMTVANTGGSVPGVNVPGIAGGNVQMTPDG
HHHHHCCCCCCCCHHHHEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCC
RGGMNLSVTNGENSVSIVGGRITVDNGKQHVSVAAPAGFALGGIAFGYGLAMLPIGIVGL
CCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
LVCVWLTRVTWRALGRYVRRRIDAVSAKLERERAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQDAFIQRLRQALGSLPKRDVDEIVADYREYIGDALSAGRTEEDVIAALGEPEKLAREL
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHH
KAQANFRQWEERRSFGNLMRVVGSIAGLGLLHLVLLVPFLLYMLVLTLGYVFFGALTVAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVTLVAFGSHYVFGTPVPGVLPFGGGAAQLGAAGASGKADGKGATDGKAAQTGKIAQDPK
HHHHHHHCCCCEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SASAAAADALNDAKELRVEGERYVLDLHDGSRVSIVTRKGVIDARKQGGKLSIDATGDGA
HHHHHHHHHHHHHHHHEECCCEEEEECCCCCEEEEEEECCCHHHHHCCCEEEEECCCCCH
RELLTTGKDDTLGIARADVIALDLKSANGDQMTVANTGGSVPGVNVPGIAGGNVQMTPDG
HHHHHCCCCCCCCHHHHEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCC
RGGMNLSVTNGENSVSIVGGRITVDNGKQHVSVAAPAGFALGGIAFGYGLAMLPIGIVGL
CCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
LVCVWLTRVTWRALGRYVRRRIDAVSAKLERERAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA