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The map label for this gene is mmgC [H]

Identifier: 237814461

GI number: 237814461

Start: 4079224

End: 4080360

Strand: Direct

Name: mmgC [H]

Synonym: GBP346_A4259

Alternate gene names: 237814461

Gene position: 4079224-4080360 (Clockwise)

Preceding gene: 237814455

Following gene: 237814463

Centisome position: 99.53

GC content: 67.11

Gene sequence:

>1137_bases
ATGATTCCCCGCACCATCTTCGCCGAAGAACACGAGCAGTTCCGCGAGTCCGTCCGCCGCTTCATCGAATCCGAGGTGAT
GCCGCACCACGAGCGCTGGGAGGAGCAAGGCTACGTCGATCGCGACGTGTGGACGAAGGCGGCCGCGGCCGGCTATCACT
GCGCGAGCATGCCCGAGGCGTACGGCGGCGTGGGCGCGGACATCCGCTACAGCGTCGTGCTGTTCGAGGAGATCGCGCGC
GCCGGCGCGTCGGGGCTCGGCTTCGGGCTGCATTCGGAGATCGTCGCGCCGTACATCCTCCATTACGGCAGCGATGCGCT
CAAGGCGCGCTATCTGCCGAAGCTCGCGAGCGCCGAGATGATCGGCGCGATCGCGATGACCGAGCCCGGCGCGGGCTCGG
ACCTGCAAGGTGTGCGCACGACCGCGGTGCGCGACGGCGATCACTACGTGCTCAACGGCTCGAAGATCTTCATCACGAAC
GGCTGGCATGCGGACGTCGTGATCGTCGTCGCGCGCACGACGCCCGAGGGCGGCTCGAAGGGCACGAGCCTGTTCGTCGT
CGACACGGGCATGGCGGGCTTCAGCAAGGGCAAGCGGCTGAAGAAGGTCGGCATGAAGGCGCAGGACACGTCGGAGCTCT
TCTTCGACGGCGTGCGCGTGCCGGCCGGCAACCTGCTCGGCGAGGAGAACCGCGGCTTCGTCTATCTGATGCAGGAGCTG
CCGTGGGAGCGGCTGCAGATCGCGATCAGCGCGATCGCGTCGGCCGAGGCGGCGCTCGCGTGGACGCTCGACTACACGCG
CGAGCGCCGCGCGTTCGGCCGCGCGGTGATCGATTTCCAGACGAGCCGCCACGCGCTCGCCGAGCTGAAGAGCGAGATCC
AGATCGGCCGCGTGTTCGTCGACAAATGCATCGAGCTGCAGCTCGCGGGCAAGCTCGACGCGGCGACGGCCTCGATGGCG
AAGTACTGGACGACCGATCTGCAGTTCAAGGTGATCGATCGCTGCGTGCAGCTGCACGGCGGTTACGGCTACATGTGGGA
ATACCCGATCGCGCGCGCCTGGGCCGATTCGCGCGTGCAGCAGATCTACGGCGGCACCAACGAAATCATGAAGGAACTGA
TCGCGCGCACGCTGTGA

Upstream 100 bases:

>100_bases
GCGTTTCGGATCAACGCAGATTGTCCCGGACTTGCTCAAATACCGCAAACAGCCCGCCGTCGGCACCGACGCGCCGCGCG
ATTCATCTCCTGGAGACGCC

Downstream 100 bases:

>100_bases
CGGCGTGGCCGTGACGCGTGGGCGATGCGGCCCGGCTCGGCCGCGCGTCACGGTTCGAGCGCGGGCGGCGGCGTGATCGA
CGCGAGCGGTTCGCGCGCGG

Product: long-chain specific acyl-coa dehydrogenase, (lcad)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MIPRTIFAEEHEQFRESVRRFIESEVMPHHERWEEQGYVDRDVWTKAAAAGYHCASMPEAYGGVGADIRYSVVLFEEIAR
AGASGLGFGLHSEIVAPYILHYGSDALKARYLPKLASAEMIGAIAMTEPGAGSDLQGVRTTAVRDGDHYVLNGSKIFITN
GWHADVVIVVARTTPEGGSKGTSLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQEL
PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFVDKCIELQLAGKLDAATASMA
KYWTTDLQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYGGTNEIMKELIARTL

Sequences:

>Translated_378_residues
MIPRTIFAEEHEQFRESVRRFIESEVMPHHERWEEQGYVDRDVWTKAAAAGYHCASMPEAYGGVGADIRYSVVLFEEIAR
AGASGLGFGLHSEIVAPYILHYGSDALKARYLPKLASAEMIGAIAMTEPGAGSDLQGVRTTAVRDGDHYVLNGSKIFITN
GWHADVVIVVARTTPEGGSKGTSLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQEL
PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFVDKCIELQLAGKLDAATASMA
KYWTTDLQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYGGTNEIMKELIARTL
>Mature_378_residues
MIPRTIFAEEHEQFRESVRRFIESEVMPHHERWEEQGYVDRDVWTKAAAAGYHCASMPEAYGGVGADIRYSVVLFEEIAR
AGASGLGFGLHSEIVAPYILHYGSDALKARYLPKLASAEMIGAIAMTEPGAGSDLQGVRTTAVRDGDHYVLNGSKIFITN
GWHADVVIVVARTTPEGGSKGTSLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQEL
PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFVDKCIELQLAGKLDAATASMA
KYWTTDLQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQQIYGGTNEIMKELIARTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=377, Percent_Identity=54.6419098143236, Blast_Score=431, Evalue=1e-121,
Organism=Homo sapiens, GI226958412, Length=377, Percent_Identity=34.4827586206897, Blast_Score=238, Evalue=5e-63,
Organism=Homo sapiens, GI226958414, Length=341, Percent_Identity=36.0703812316716, Blast_Score=224, Evalue=7e-59,
Organism=Homo sapiens, GI7656849, Length=377, Percent_Identity=33.42175066313, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI4501859, Length=375, Percent_Identity=31.7333333333333, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI4557233, Length=370, Percent_Identity=31.8918918918919, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI76496475, Length=391, Percent_Identity=33.2480818414322, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI4557235, Length=391, Percent_Identity=33.2480818414322, Blast_Score=192, Evalue=3e-49,
Organism=Homo sapiens, GI187960098, Length=374, Percent_Identity=28.8770053475936, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI4557231, Length=374, Percent_Identity=28.8770053475936, Blast_Score=185, Evalue=5e-47,
Organism=Homo sapiens, GI21361497, Length=383, Percent_Identity=30.8093994778068, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI4503943, Length=373, Percent_Identity=27.3458445040214, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI7669494, Length=346, Percent_Identity=27.4566473988439, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI48976061, Length=391, Percent_Identity=25.3196930946292, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI211971008, Length=391, Percent_Identity=25.3196930946292, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI38505218, Length=293, Percent_Identity=28.3276450511945, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI218563752, Length=325, Percent_Identity=24.3076923076923, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI87081958, Length=384, Percent_Identity=29.9479166666667, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1786223, Length=382, Percent_Identity=26.7015706806283, Blast_Score=130, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17508101, Length=375, Percent_Identity=32.5333333333333, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17570075, Length=374, Percent_Identity=34.2245989304813, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17538396, Length=382, Percent_Identity=31.9371727748691, Blast_Score=218, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17533517, Length=369, Percent_Identity=33.0623306233062, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17551932, Length=380, Percent_Identity=32.1052631578947, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17506239, Length=377, Percent_Identity=30.2387267904509, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17505929, Length=375, Percent_Identity=32.2666666666667, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17534899, Length=378, Percent_Identity=31.2169312169312, Blast_Score=199, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17569725, Length=378, Percent_Identity=30.6878306878307, Blast_Score=197, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI71990804, Length=270, Percent_Identity=34.8148148148148, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI71985184, Length=362, Percent_Identity=32.5966850828729, Blast_Score=174, Evalue=8e-44,
Organism=Caenorhabditis elegans, GI71982178, Length=280, Percent_Identity=31.4285714285714, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI32563615, Length=225, Percent_Identity=34.6666666666667, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71985192, Length=324, Percent_Identity=33.0246913580247, Blast_Score=143, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17534353, Length=376, Percent_Identity=26.8617021276596, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17531909, Length=241, Percent_Identity=29.045643153527, Blast_Score=117, Evalue=7e-27,
Organism=Caenorhabditis elegans, GI17562446, Length=289, Percent_Identity=28.3737024221453, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI86563381, Length=267, Percent_Identity=26.5917602996255, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI86563383, Length=267, Percent_Identity=26.5917602996255, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355753, Length=375, Percent_Identity=34.4, Blast_Score=222, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24666513, Length=377, Percent_Identity=31.2997347480106, Blast_Score=213, Evalue=1e-55,
Organism=Drosophila melanogaster, GI21356377, Length=373, Percent_Identity=31.3672922252011, Blast_Score=208, Evalue=4e-54,
Organism=Drosophila melanogaster, GI24660351, Length=377, Percent_Identity=31.0344827586207, Blast_Score=182, Evalue=3e-46,
Organism=Drosophila melanogaster, GI24646207, Length=376, Percent_Identity=30.8510638297872, Blast_Score=174, Evalue=7e-44,
Organism=Drosophila melanogaster, GI281363737, Length=364, Percent_Identity=30.2197802197802, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI19920834, Length=382, Percent_Identity=27.7486910994764, Blast_Score=115, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41898; Mature: 41898

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPRTIFAEEHEQFRESVRRFIESEVMPHHERWEEQGYVDRDVWTKAAAAGYHCASMPEA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCHHCCCHH
YGGVGADIRYSVVLFEEIARAGASGLGFGLHSEIVAPYILHYGSDALKARYLPKLASAEM
HCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHH
IGAIAMTEPGAGSDLQGVRTTAVRDGDHYVLNGSKIFITNGWHADVVIVVARTTPEGGSK
HHEEEECCCCCCCCCCCCEEEEEECCCEEEEECCEEEEECCCCCEEEEEEEECCCCCCCC
GTSLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQEL
CCEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEHHHC
PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV
CHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHH
DKCIELQLAGKLDAATASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQ
HHHHHEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH
QIYGGTNEIMKELIARTL
HHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIPRTIFAEEHEQFRESVRRFIESEVMPHHERWEEQGYVDRDVWTKAAAAGYHCASMPEA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCHHCCCHH
YGGVGADIRYSVVLFEEIARAGASGLGFGLHSEIVAPYILHYGSDALKARYLPKLASAEM
HCCCCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHH
IGAIAMTEPGAGSDLQGVRTTAVRDGDHYVLNGSKIFITNGWHADVVIVVARTTPEGGSK
HHEEEECCCCCCCCCCCCEEEEEECCCEEEEECCEEEEECCCCCEEEEEEEECCCCCCCC
GTSLFVVDTGMAGFSKGKRLKKVGMKAQDTSELFFDGVRVPAGNLLGEENRGFVYLMQEL
CCEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEHHHC
PWERLQIAISAIASAEAALAWTLDYTRERRAFGRAVIDFQTSRHALAELKSEIQIGRVFV
CHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHH
DKCIELQLAGKLDAATASMAKYWTTDLQFKVIDRCVQLHGGYGYMWEYPIARAWADSRVQ
HHHHHEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH
QIYGGTNEIMKELIARTL
HHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]