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The map label for this gene is 237814436

Identifier: 237814436

GI number: 237814436

Start: 4052327

End: 4053547

Strand: Direct

Name: 237814436

Synonym: GBP346_A4235

Alternate gene names: NA

Gene position: 4052327-4053547 (Clockwise)

Preceding gene: 237814435

Following gene: 237814438

Centisome position: 98.87

GC content: 65.11

Gene sequence:

>1221_bases
GTGGCCGTTCGACGCGCATCGCGCAGCGTCTGCGCAGCCGACGCTGCGTACTACGAAAGAATGGCGGTCAACACGATATC
GGAGGGGACGATCTTGAAACGACAATACCTGGCACTTTCCATCGCGACGGCCGCCTGCGCGGCGCCGCAAGCGCACGCGC
AGTCGAGCGTCCAGCTCTACGGGCTCATCGACCTGAGCGTTCCGACCTATCGCTCGCACGCGAACGCGAAGGGCGATCAC
GTGATCGGCATGGGGCTCGGCGGCGAGCCGTGGTTCAGCGGCAGCCGCTGGGGGCTGAAGGGCGCGGAGGACATCGGCGG
CGGCACGAAGGTGATCTTCCGGCTCGAAAGCGAATACACGGTAGCCGACGGCAACATGGAGGACCCGGGCCAGATCTTCG
ATCGCGATGCGTGGGTCGGCGTCGAAAACGACACGTTCGGCAAGCTCACCGCGGGCTTCCAGAACACGATCGCGCGCGAC
GCGGCGGCGATCTACGGCGACCCTTACGGCTCGGCGAAGCTCACGACCGAGGAAGGCGGCTGGACGAACGCGAACAACTT
CAAGCAGATGATCTTCTACGCGGCCGGTGCGACCGGCACGCGCTACAACAACGGCCTCGCGTGGAAGAAGCTGTTCGGCA
ACGGCATCTTCGCGAGCGCGGGCTACGCGTTCAGCAATTCGACGAGCTTCGGGCAGAACTCGACCTATCAGGTCGCGCTC
GGCTACAACGGCGGCCCGTTCAACGTGTCGGGCTTCTTCAGCCACGTGAACCACGCGGGCTACGCGAACAAGTCGTTCTC
GGTCGGCGGCAACTACACGTTCGACATCTTCCGCGTGAACGCCGGCTACTTCCGCTACCTGGGCGATCAGGGCGCGCTCG
GCCAGCGCCAGGACAACGCGTGGACGGTGTCGTTCAAGGTCGCGCCGAAGGGCGCGCTCGACTACGAGCTCGGCTATCAG
CAGATGCGCGTGCACAACGCCGCGTACAACAGCGACGGCAACGTGCCGAACGCGAACATCGGCGACTTCAGCCTCACGTC
GGGCGTCGGCAACGGCTTCAAGGAAACGCTGTACGGCTCGGTGTTCTACCACCTGTCGAAGCGCACCGAGCTGTACCTCG
CCGGCGACTACATGCGCCTGCACGGCGGCTATACGGTCGCGTCCACGCACGGCGCGACCAATCAGCTTGAGCTGACGACC
GGCATCCGCACGCGGTTCTGA

Upstream 100 bases:

>100_bases
CGCCTGATCCAGCCGAAAAACGCACGCCACCCCGTACTTATCCCGAGATTCGCGTGGCCGGCGCGAAAGCGCCGCGAAGG
ATTGCGCCCACTACGATGGC

Downstream 100 bases:

>100_bases
TCCGCCGCGCGGGGCGGCCGGCCGACGCGTCGGCCGTGCCGCCCTTCGCGCTCCCCGCCCGCCTGTTCGGTCTTTCCCGC
CTTTTTCGCCGCGCCCGCCC

Product: outer membrane porin lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MAVRRASRSVCAADAAYYERMAVNTISEGTILKRQYLALSIATAACAAPQAHAQSSVQLYGLIDLSVPTYRSHANAKGDH
VIGMGLGGEPWFSGSRWGLKGAEDIGGGTKVIFRLESEYTVADGNMEDPGQIFDRDAWVGVENDTFGKLTAGFQNTIARD
AAAIYGDPYGSAKLTTEEGGWTNANNFKQMIFYAAGATGTRYNNGLAWKKLFGNGIFASAGYAFSNSTSFGQNSTYQVAL
GYNGGPFNVSGFFSHVNHAGYANKSFSVGGNYTFDIFRVNAGYFRYLGDQGALGQRQDNAWTVSFKVAPKGALDYELGYQ
QMRVHNAAYNSDGNVPNANIGDFSLTSGVGNGFKETLYGSVFYHLSKRTELYLAGDYMRLHGGYTVASTHGATNQLELTT
GIRTRF

Sequences:

>Translated_406_residues
MAVRRASRSVCAADAAYYERMAVNTISEGTILKRQYLALSIATAACAAPQAHAQSSVQLYGLIDLSVPTYRSHANAKGDH
VIGMGLGGEPWFSGSRWGLKGAEDIGGGTKVIFRLESEYTVADGNMEDPGQIFDRDAWVGVENDTFGKLTAGFQNTIARD
AAAIYGDPYGSAKLTTEEGGWTNANNFKQMIFYAAGATGTRYNNGLAWKKLFGNGIFASAGYAFSNSTSFGQNSTYQVAL
GYNGGPFNVSGFFSHVNHAGYANKSFSVGGNYTFDIFRVNAGYFRYLGDQGALGQRQDNAWTVSFKVAPKGALDYELGYQ
QMRVHNAAYNSDGNVPNANIGDFSLTSGVGNGFKETLYGSVFYHLSKRTELYLAGDYMRLHGGYTVASTHGATNQLELTT
GIRTRF
>Mature_405_residues
AVRRASRSVCAADAAYYERMAVNTISEGTILKRQYLALSIATAACAAPQAHAQSSVQLYGLIDLSVPTYRSHANAKGDHV
IGMGLGGEPWFSGSRWGLKGAEDIGGGTKVIFRLESEYTVADGNMEDPGQIFDRDAWVGVENDTFGKLTAGFQNTIARDA
AAIYGDPYGSAKLTTEEGGWTNANNFKQMIFYAAGATGTRYNNGLAWKKLFGNGIFASAGYAFSNSTSFGQNSTYQVALG
YNGGPFNVSGFFSHVNHAGYANKSFSVGGNYTFDIFRVNAGYFRYLGDQGALGQRQDNAWTVSFKVAPKGALDYELGYQQ
MRVHNAAYNSDGNVPNANIGDFSLTSGVGNGFKETLYGSVFYHLSKRTELYLAGDYMRLHGGYTVASTHGATNQLELTTG
IRTRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 43804; Mature: 43673

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRRASRSVCAADAAYYERMAVNTISEGTILKRQYLALSIATAACAAPQAHAQSSVQLY
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHEEEEEEHHHHHCCCHHHCCCCEEEE
GLIDLSVPTYRSHANAKGDHVIGMGLGGEPWFSGSRWGLKGAEDIGGGTKVIFRLESEYT
EEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCCCCEEEEEEEECCEE
VADGNMEDPGQIFDRDAWVGVENDTFGKLTAGFQNTIARDAAAIYGDPYGSAKLTTEEGG
EECCCCCCCHHHHCCCEEEECCCCCCCHHHCCHHHHHHHHHHHEECCCCCCCEEEECCCC
WTNANNFKQMIFYAAGATGTRYNNGLAWKKLFGNGIFASAGYAFSNSTSFGQNSTYQVAL
CCCCCCCEEEEEEEECCCCCCCCCCCEEHHHHCCCEEEECCEEECCCCCCCCCCEEEEEE
GYNGGPFNVSGFFSHVNHAGYANKSFSVGGNYTFDIFRVNAGYFRYLGDQGALGQRQDNA
ECCCCCCCHHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCEEEEECCCCCCCCCCCCE
WTVSFKVAPKGALDYELGYQQMRVHNAAYNSDGNVPNANIGDFSLTSGVGNGFKETLYGS
EEEEEEECCCCCCCHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHH
VFYHLSKRTELYLAGDYMRLHGGYTVASTHGATNQLELTTGIRTRF
HHEEECCCEEEEEEECEEEEECCEEEEECCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
AVRRASRSVCAADAAYYERMAVNTISEGTILKRQYLALSIATAACAAPQAHAQSSVQLY
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHEEEEEEHHHHHCCCHHHCCCCEEEE
GLIDLSVPTYRSHANAKGDHVIGMGLGGEPWFSGSRWGLKGAEDIGGGTKVIFRLESEYT
EEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHCCCCEEEEEEEECCEE
VADGNMEDPGQIFDRDAWVGVENDTFGKLTAGFQNTIARDAAAIYGDPYGSAKLTTEEGG
EECCCCCCCHHHHCCCEEEECCCCCCCHHHCCHHHHHHHHHHHEECCCCCCCEEEECCCC
WTNANNFKQMIFYAAGATGTRYNNGLAWKKLFGNGIFASAGYAFSNSTSFGQNSTYQVAL
CCCCCCCEEEEEEEECCCCCCCCCCCEEHHHHCCCEEEECCEEECCCCCCCCCCEEEEEE
GYNGGPFNVSGFFSHVNHAGYANKSFSVGGNYTFDIFRVNAGYFRYLGDQGALGQRQDNA
ECCCCCCCHHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCEEEEECCCCCCCCCCCCE
WTVSFKVAPKGALDYELGYQQMRVHNAAYNSDGNVPNANIGDFSLTSGVGNGFKETLYGS
EEEEEEECCCCCCCHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHH
VFYHLSKRTELYLAGDYMRLHGGYTVASTHGATNQLELTTGIRTRF
HHEEECCCEEEEEEECEEEEECCEEEEECCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]