| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is gspI
Identifier: 237814406
GI number: 237814406
Start: 4026934
End: 4027344
Strand: Direct
Name: gspI
Synonym: GBP346_A4204
Alternate gene names: NA
Gene position: 4026934-4027344 (Clockwise)
Preceding gene: 237814405
Following gene: 237814407
Centisome position: 98.25
GC content: 71.78
Gene sequence:
>411_bases GTGACGATGCGCGTGCCCGCCCCGCCCCGCTCTCCCGCGCGCTCGCGCGGCTTCACGATGATCGAGGTGCTCGTCGCGCT CGCGATCATCGCGGTCGCGCTCGCGGCGTCGATCCGCGCGGTGGGCTCGATGGCCACGGGCGCGTCCGATCTGCACGCGC GCCTGCTCGCCGGCTGGAGCGCGGACAACGCGCTCGCGCAACTGCGGCTCGCGCACGCGTGGCCCGACATCGGCATGCAG ACGTTCGACTGCTCGCAGGGCAACGTCGCGCTCACCTGCACGCAGCGCGTGAGCTCGACGCCGAATCCCGTGTTCAGGCG CGTCGAGATCGCGGTGTCGATGAACGGACGGGCCGGCGTGCTCGCGCAGATGGTGACGGTGGTCGCGAATGAAACCAGCC GTCCGCTCTGA
Upstream 100 bases:
>100_bases TCGGCACCGAAAGCATCGACGTGCCGGTGCGCGTCACGCTGTATTCGGCGGTCGGCAGCGCGACGATCGTCGGCACCGGC AACGGCCGCTACGAGGTGCG
Downstream 100 bases:
>100_bases GCGCCGCGCGCCCGGCGAGAAACGCCCGCGGCGGGCGCGCCGCGCCTTCCGGCGAGGCGCGCGCCACGGCGCGCGCGGCT TCACGCTGATCGAAATGATG
Product: general secretion pathway protein I
Products: NA
Alternate protein names: Type II Secretory Pathway Pseudopilin PulG; General Secretory Pathway I Transmembrane Protein
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MTMRVPAPPRSPARSRGFTMIEVLVALAIIAVALAASIRAVGSMATGASDLHARLLAGWSADNALAQLRLAHAWPDIGMQ TFDCSQGNVALTCTQRVSSTPNPVFRRVEIAVSMNGRAGVLAQMVTVVANETSRPL
Sequences:
>Translated_136_residues MTMRVPAPPRSPARSRGFTMIEVLVALAIIAVALAASIRAVGSMATGASDLHARLLAGWSADNALAQLRLAHAWPDIGMQ TFDCSQGNVALTCTQRVSSTPNPVFRRVEIAVSMNGRAGVLAQMVTVVANETSRPL >Mature_135_residues TMRVPAPPRSPARSRGFTMIEVLVALAIIAVALAASIRAVGSMATGASDLHARLLAGWSADNALAQLRLAHAWPDIGMQT FDCSQGNVALTCTQRVSSTPNPVFRRVEIAVSMNGRAGVLAQMVTVVANETSRPL
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14325; Mature: 14194
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMRVPAPPRSPARSRGFTMIEVLVALAIIAVALAASIRAVGSMATGASDLHARLLAGWS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC ADNALAQLRLAHAWPDIGMQTFDCSQGNVALTCTQRVSSTPNPVFRRVEIAVSMNGRAGV CCHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHEEEEEEEEECCCHHH LAQMVTVVANETSRPL HHHHHHHHHCCCCCCC >Mature Secondary Structure TMRVPAPPRSPARSRGFTMIEVLVALAIIAVALAASIRAVGSMATGASDLHARLLAGWS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC ADNALAQLRLAHAWPDIGMQTFDCSQGNVALTCTQRVSSTPNPVFRRVEIAVSMNGRAGV CCHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCHHHEEEEEEEEECCCHHH LAQMVTVVANETSRPL HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA