Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237814392

Identifier: 237814392

GI number: 237814392

Start: 4013009

End: 4014223

Strand: Reverse

Name: 237814392

Synonym: GBP346_A4190

Alternate gene names: NA

Gene position: 4014223-4013009 (Counterclockwise)

Preceding gene: 237814393

Following gene: 237814391

Centisome position: 97.94

GC content: 66.26

Gene sequence:

>1215_bases
ATGAAGTCAGCGTTCTCGTTTCTACCCAACTGGCCGCTCGCCCCGGATGCGATTTTCTGGGCCGGCTTCGCGCTGTTCGC
CGCCGGGCTTTGCGGCGAGCTCTGCTATCGCGCATGGCGCCTGCCGCGCATCACCGGCTATGCGGTGATCGGCCTCGTCG
CCGGCTCGTTCGGCTTCGGCGTGATCGACGCGAGCACCGACGACACGTCGCGGCTCCTCGTCAACGTCGCGCTCGGCCTG
CTGCTGTTCGAGCTCGGCAGCCGGCTCGACTTGCGCTGGATCCGCCGCAATCCGTGGCTCATCGCCTCGAGTCTCGCCGA
GGCGACGCTCACGTTCGTGCTCGTGCTTGCGGTGCTGCTGCTGCTCAAGGTGCCCGGGATGATCGCGCTCGTGCTGGCGG
CGATCGCGATCTCGACGTCGCCCGCGATGGTGATCCAGCTGAAGACGGAGCTGCGCGCGGAAGGGCAGGTCTCGCAGCGG
CTCATCACGCTGTCCGCGCTCAACAGCGTCTATGCGGTCGTGCTGACGAAGCTCGTCACGAGCTGGCTGCATCAGGAAGC
GTACGGCAACGTGTTCGCGACGATCCTGCAGCCGATCTATCTGCTCGCCGGCTCGTTCATCGTCGCGTATCTGTTCGCTC
GCGCATGCAACTATCTGTTCAGGCACGTCGCGGCGACGATGCGCGACGAACATTCGTTCGTCGCGCTGTTCGGCCTTGTC
GTGCTGGCGATTGCGGTCGCGCAGGTGCTCAAGCTGTCGACGATGCTCACGCTGCTGCTCGCCGGCATCATCGTGAAGAA
TCTCGAGGCGCGTCCGCAATTGTGGCCCGAGCACTTCGGCACGGCCGGCTGGCTTCTCACCGTGATCCTGTTCGTGCTGA
CGCTCACGTCGTTCGAAGGGCAGGACATCGCCGCGGGCGGGCTCATCGCGGGCGCGCTGATTGCGACGCGCTTTCTCGCG
AAGCTCGTCGGCGTGCTCGCGTTCGCGAAGCCGAGCGGCCTCGGCGTGAAGCAGGGCATCGCGCTCGGCGTCTCGCTCGT
GCCGATGTCGGCGCTCGCGTACCTGCTCGTCGACGACACTTACCAGCTTTACCCGAATTTCGATCCGCGCCTGCGCGCGG
TCGTCATGTGCTCGATCGTCGTGCTGCAACTGATCGGGCCGCTCGTCGTCTATCGCAGCCTGTCGGCCGTCGGCGAGCGG
CGCGACGCGAGCTGA

Upstream 100 bases:

>100_bases
CAACGAACGACGGGGCAACCCCTCATCCAGCGCGCATCATTCGCTCGACTCGCTCGATCCGCGTCGCCGGAGGTTGCCTT
CCAAAGGAGAAGTCACCACG

Downstream 100 bases:

>100_bases
GCCGCGCGCTCGACGCTTTTCGCCCTGTTATCCGGAATCACGCCATGGCACTCGAAACCTTCGTCAATTCCGAACCGTTC
ACGTTCGGCGTCGAGCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Sodium/Hydrogen Exchanger Family Protein; Na/H Antiporter

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKSAFSFLPNWPLAPDAIFWAGFALFAAGLCGELCYRAWRLPRITGYAVIGLVAGSFGFGVIDASTDDTSRLLVNVALGL
LLFELGSRLDLRWIRRNPWLIASSLAEATLTFVLVLAVLLLLKVPGMIALVLAAIAISTSPAMVIQLKTELRAEGQVSQR
LITLSALNSVYAVVLTKLVTSWLHQEAYGNVFATILQPIYLLAGSFIVAYLFARACNYLFRHVAATMRDEHSFVALFGLV
VLAIAVAQVLKLSTMLTLLLAGIIVKNLEARPQLWPEHFGTAGWLLTVILFVLTLTSFEGQDIAAGGLIAGALIATRFLA
KLVGVLAFAKPSGLGVKQGIALGVSLVPMSALAYLLVDDTYQLYPNFDPRLRAVVMCSIVVLQLIGPLVVYRSLSAVGER
RDAS

Sequences:

>Translated_404_residues
MKSAFSFLPNWPLAPDAIFWAGFALFAAGLCGELCYRAWRLPRITGYAVIGLVAGSFGFGVIDASTDDTSRLLVNVALGL
LLFELGSRLDLRWIRRNPWLIASSLAEATLTFVLVLAVLLLLKVPGMIALVLAAIAISTSPAMVIQLKTELRAEGQVSQR
LITLSALNSVYAVVLTKLVTSWLHQEAYGNVFATILQPIYLLAGSFIVAYLFARACNYLFRHVAATMRDEHSFVALFGLV
VLAIAVAQVLKLSTMLTLLLAGIIVKNLEARPQLWPEHFGTAGWLLTVILFVLTLTSFEGQDIAAGGLIAGALIATRFLA
KLVGVLAFAKPSGLGVKQGIALGVSLVPMSALAYLLVDDTYQLYPNFDPRLRAVVMCSIVVLQLIGPLVVYRSLSAVGER
RDAS
>Mature_404_residues
MKSAFSFLPNWPLAPDAIFWAGFALFAAGLCGELCYRAWRLPRITGYAVIGLVAGSFGFGVIDASTDDTSRLLVNVALGL
LLFELGSRLDLRWIRRNPWLIASSLAEATLTFVLVLAVLLLLKVPGMIALVLAAIAISTSPAMVIQLKTELRAEGQVSQR
LITLSALNSVYAVVLTKLVTSWLHQEAYGNVFATILQPIYLLAGSFIVAYLFARACNYLFRHVAATMRDEHSFVALFGLV
VLAIAVAQVLKLSTMLTLLLAGIIVKNLEARPQLWPEHFGTAGWLLTVILFVLTLTSFEGQDIAAGGLIAGALIATRFLA
KLVGVLAFAKPSGLGVKQGIALGVSLVPMSALAYLLVDDTYQLYPNFDPRLRAVVMCSIVVLQLIGPLVVYRSLSAVGER
RDAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43578; Mature: 43578

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAFSFLPNWPLAPDAIFWAGFALFAAGLCGELCYRAWRLPRITGYAVIGLVAGSFGFG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
VIDASTDDTSRLLVNVALGLLLFELGSRLDLRWIRRNPWLIASSLAEATLTFVLVLAVLL
EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LLKVPGMIALVLAAIAISTSPAMVIQLKTELRAEGQVSQRLITLSALNSVYAVVLTKLVT
HHHCCHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SWLHQEAYGNVFATILQPIYLLAGSFIVAYLFARACNYLFRHVAATMRDEHSFVALFGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VLAIAVAQVLKLSTMLTLLLAGIIVKNLEARPQLWPEHFGTAGWLLTVILFVLTLTSFEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCC
QDIAAGGLIAGALIATRFLAKLVGVLAFAKPSGLGVKQGIALGVSLVPMSALAYLLVDDT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
YQLYPNFDPRLRAVVMCSIVVLQLIGPLVVYRSLSAVGERRDAS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKSAFSFLPNWPLAPDAIFWAGFALFAAGLCGELCYRAWRLPRITGYAVIGLVAGSFGFG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
VIDASTDDTSRLLVNVALGLLLFELGSRLDLRWIRRNPWLIASSLAEATLTFVLVLAVLL
EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LLKVPGMIALVLAAIAISTSPAMVIQLKTELRAEGQVSQRLITLSALNSVYAVVLTKLVT
HHHCCHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SWLHQEAYGNVFATILQPIYLLAGSFIVAYLFARACNYLFRHVAATMRDEHSFVALFGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VLAIAVAQVLKLSTMLTLLLAGIIVKNLEARPQLWPEHFGTAGWLLTVILFVLTLTSFEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCC
QDIAAGGLIAGALIATRFLAKLVGVLAFAKPSGLGVKQGIALGVSLVPMSALAYLLVDDT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
YQLYPNFDPRLRAVVMCSIVVLQLIGPLVVYRSLSAVGERRDAS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA