| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814370
Identifier: 237814370
GI number: 237814370
Start: 3993950
End: 3995146
Strand: Reverse
Name: 237814370
Synonym: GBP346_A4168
Alternate gene names: NA
Gene position: 3995146-3993950 (Counterclockwise)
Preceding gene: 237814371
Following gene: 237814369
Centisome position: 97.48
GC content: 63.91
Gene sequence:
>1197_bases ATGAAATTGAAGACCCTTGCGCACGCCTGTCTTGCCGTCGCCGCCGCGTGGTCGGTGGGCGCCGCGCAGGCCGCGGATTC CGTGAAGATCGGCTTCATCACCGACATGTCCGGCCTCTATGCCGACATCGACGGGCAGGGCGGCCTCGAGGCGATCAAGA TGGCGGTGGCCGACTTCGGCGGCAAGGTCAACGGCAAGCCGATCGAGGTCGTGTATGCGGACCACCAGAACAAGGCGGAC ATCGCCGCATCGAAGGCGCGCGAATGGATGGACCGCGGCGGGCTCGACCTGCTCGTCGGCGGCACGAACTCGGCGACCGC GCTGTCGATGAACCAGGTCGCGGCCGAGAAGAAGAAGGTCTACATCAACATCGGCGCGGGCGCGGACACGCTGACGAACG AGCAGTGCACGCCGTACACGGTCCACTACGCGTACGACACGATGGCGCTCGCGAAGGGCACGGGCTCGGCGGTGGTGAAG CAGGGCGGCAAGACGTGGTTCTTCCTGACCGCCGATTACGCGTTCGGCAAGGCGCTCGAGAAGAACACCGCGGACGTCGT CAAGGCCAACGGCGGCAAGGTGCTCGGCGAAGTGCGCCATCCGCTGTCGGCGTCGGATTTCTCGTCGTTCCTGTTGCAGG CGCAGTCGTCGAAGGCGCAGATCCTCGGCCTCGCGAACGCGGGGGGCGACACGGTGAACGCGATCAAGGCGGCGAAGGAA TTCGGCATCACGAAGACGATGAAGCTCGCCGCGCTGCTGATGTTCATCAACGATGTCCACGCGCTCGGCCTCGAGACGAC GCAGGGTCTCGTGCTGACGGACAGCTGGTACTGGAACCGCGATCAGGCGTCGCGGCAGTGGGCGCAGCGCTATTTCGCGA AGATGAAGAAGATGCCGTCGAGCCTGCAGGCGGCGGACTATTCGTCGGTGACGACTTACCTGAAGGCGGTGCAGGCGGCG GGCTCGACCGATTCCGACAAGGTGATGGCGCAGCTCAAGAAGATGAAGATCGACGACTTCTATGCGAAGGGCTCCATCCG CACGGACGGCAGCATGATTCACGACATGTATCTGATGGAAGTGAAGAAGCCGTCCGAATCGAAGGAGCCGTGGGACTACT ACAAGGTCGTCGCGACGATTCCGGGCGAGCAGGCATTCACGACGAAGCAGGAGACGCGCTGCGCGCTCTGGAAGTGA
Upstream 100 bases:
>100_bases ATGCCCGTGCTGCATGATCTGCTCGGCGTATAGCGCCGCTTTGCCGTTCCCCCGATGTACATAACCTGACAACCACAACG CACTACACCAGGAGACGCCA
Downstream 100 bases:
>100_bases CCCGCGCCGTTGCCGGCGCCGCGCATGCCGCGGCGCGCGGCGAATGCACGCGCGACGGCGGACGAACGCCGCCGTCGCGC GTATTTGGTTGCATGCGCAA
Product: branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKLKTLAHACLAVAAAWSVGAAQAADSVKIGFITDMSGLYADIDGQGGLEAIKMAVADFGGKVNGKPIEVVYADHQNKAD IAASKAREWMDRGGLDLLVGGTNSATALSMNQVAAEKKKVYINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVK QGGKTWFFLTADYAFGKALEKNTADVVKANGGKVLGEVRHPLSASDFSSFLLQAQSSKAQILGLANAGGDTVNAIKAAKE FGITKTMKLAALLMFINDVHALGLETTQGLVLTDSWYWNRDQASRQWAQRYFAKMKKMPSSLQAADYSSVTTYLKAVQAA GSTDSDKVMAQLKKMKIDDFYAKGSIRTDGSMIHDMYLMEVKKPSESKEPWDYYKVVATIPGEQAFTTKQETRCALWK
Sequences:
>Translated_398_residues MKLKTLAHACLAVAAAWSVGAAQAADSVKIGFITDMSGLYADIDGQGGLEAIKMAVADFGGKVNGKPIEVVYADHQNKAD IAASKAREWMDRGGLDLLVGGTNSATALSMNQVAAEKKKVYINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVK QGGKTWFFLTADYAFGKALEKNTADVVKANGGKVLGEVRHPLSASDFSSFLLQAQSSKAQILGLANAGGDTVNAIKAAKE FGITKTMKLAALLMFINDVHALGLETTQGLVLTDSWYWNRDQASRQWAQRYFAKMKKMPSSLQAADYSSVTTYLKAVQAA GSTDSDKVMAQLKKMKIDDFYAKGSIRTDGSMIHDMYLMEVKKPSESKEPWDYYKVVATIPGEQAFTTKQETRCALWK >Mature_398_residues MKLKTLAHACLAVAAAWSVGAAQAADSVKIGFITDMSGLYADIDGQGGLEAIKMAVADFGGKVNGKPIEVVYADHQNKAD IAASKAREWMDRGGLDLLVGGTNSATALSMNQVAAEKKKVYINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVK QGGKTWFFLTADYAFGKALEKNTADVVKANGGKVLGEVRHPLSASDFSSFLLQAQSSKAQILGLANAGGDTVNAIKAAKE FGITKTMKLAALLMFINDVHALGLETTQGLVLTDSWYWNRDQASRQWAQRYFAKMKKMPSSLQAADYSSVTTYLKAVQAA GSTDSDKVMAQLKKMKIDDFYAKGSIRTDGSMIHDMYLMEVKKPSESKEPWDYYKVVATIPGEQAFTTKQETRCALWK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42905; Mature: 42905
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKTLAHACLAVAAAWSVGAAQAADSVKIGFITDMSGLYADIDGQGGLEAIKMAVADFG CCHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHCC GKVNGKPIEVVYADHQNKADIAASKAREWMDRGGLDLLVGGTNSATALSMNQVAAEKKKV CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHHCCCCEE YINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVKQGGKTWFFLTADYAFGKALE EEEECCCCCCCCCCCCCCEEEEEEEHHEHHHCCCCCHHHHCCCCEEEEEEECCHHHHHHH KNTADVVKANGGKVLGEVRHPLSASDFSSFLLQAQSSKAQILGLANAGGDTVNAIKAAKE CCCHHEEECCCCEEEHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH FGITKTMKLAALLMFINDVHALGLETTQGLVLTDSWYWNRDQASRQWAQRYFAKMKKMPS HCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC SLQAADYSSVTTYLKAVQAAGSTDSDKVMAQLKKMKIDDFYAKGSIRTDGSMIHDMYLME HHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHEECCCCCCCCHHHHHHHEEE VKKPSESKEPWDYYKVVATIPGEQAFTTKQETRCALWK ECCCCCCCCCCCEEEEEEECCCCCCCCCCHHCHHCCCC >Mature Secondary Structure MKLKTLAHACLAVAAAWSVGAAQAADSVKIGFITDMSGLYADIDGQGGLEAIKMAVADFG CCHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHCC GKVNGKPIEVVYADHQNKADIAASKAREWMDRGGLDLLVGGTNSATALSMNQVAAEKKKV CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHHCCCCEE YINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVKQGGKTWFFLTADYAFGKALE EEEECCCCCCCCCCCCCCEEEEEEEHHEHHHCCCCCHHHHCCCCEEEEEEECCHHHHHHH KNTADVVKANGGKVLGEVRHPLSASDFSSFLLQAQSSKAQILGLANAGGDTVNAIKAAKE CCCHHEEECCCCEEEHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH FGITKTMKLAALLMFINDVHALGLETTQGLVLTDSWYWNRDQASRQWAQRYFAKMKKMPS HCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC SLQAADYSSVTTYLKAVQAAGSTDSDKVMAQLKKMKIDDFYAKGSIRTDGSMIHDMYLME HHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHEECCCCCCCCHHHHHHHEEE VKKPSESKEPWDYYKVVATIPGEQAFTTKQETRCALWK ECCCCCCCCCCCEEEEEEECCCCCCCCCCHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA