Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237814367

Identifier: 237814367

GI number: 237814367

Start: 3992447

End: 3992926

Strand: Reverse

Name: 237814367

Synonym: GBP346_A4165

Alternate gene names: NA

Gene position: 3992926-3992447 (Counterclockwise)

Preceding gene: 237814368

Following gene: 237814366

Centisome position: 97.42

GC content: 65.83

Gene sequence:

>480_bases
ATGCAGAGAAAAGCGCTCTACGGCCTGCTGCTGCTCGGCCTGCTCGTCGCGCCGTTCGTCGGCGCGTATCCGGTATTCGT
GATGAAGGTGCTGTGTTTCGCGTTGTTCGCGGCGGCGTTCAATCTGCTGATCGGCTTCACGGGGTTGCTGTCGTTCGGCC
ACGCGATGTTTCTCGCGACCGCGGGCTACGTGACGGGTTACGCGATGCAGTCGCTCGGCACGGCGCCCGAGCTCGGCGTG
CTGGCCGGCACCGCCGCCGCGACGCTGCTCGGCCTCGTCGTCGGCCTGTTCGCGATCCGGCGGCAGGGCATCTATTTCGC
GATGATCACGCTCGCGTTCGCGCAGATGGTGTATTCATCTATCTGCAAGCGCCGTTCACGCACGGCGAGGACGGCCTGCA
GGGCGTGCCGCGCGGGCGGCTGTTCGGGCTCGTCGATCTGTCGTCCGATCTCGCGCTCTACTATGTGGTGCTCGTCGTGA

Upstream 100 bases:

>100_bases
CGCGCGTGTTCTATCCGGAAGCATCGGCGACGGTCGTCTTCGTGATCATGGCGATCGTGCTGTTGATTCGTCCGGCAGGT
TTGTTCGGCAAGGAAAGATG

Downstream 100 bases:

>100_bases
TCGCGTGCGCGTGCTTCTTCATCGTGCGCATCGTGCATTCGCCGTTCGGGCAGGTGCTTGTCGCGATCAAGGAGAACGAG
CCTCGCGCGATATCGCTCGG

Product: branched-chain amino acid ABC transporter, permease protein

Products: NA

Alternate protein names: Branched-Chain Amino Acid Transport Permease; ABC Transporter Permease Protein; ABC Transporter Permease; Branched-Chain Amino Acid ABC Transporter Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter; ABC-Type Transporter Permease Component; Amino Acid ABC Transporter Permease; ABC Transporter Membrane Spanning Protein; Branched-Chain Amino Acid ABC Transporter; Permease Component Of ABC Transporter; Branched Chain Amino Acid ABC Transporter

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQRKALYGLLLLGLLVAPFVGAYPVFVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGV
LAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYSSICKRRSRTARTACRACRAGGCSGSSICRPISRSTMWCSS

Sequences:

>Translated_159_residues
MQRKALYGLLLLGLLVAPFVGAYPVFVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGV
LAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYSSICKRRSRTARTACRACRAGGCSGSSICRPISRSTMWCSS
>Mature_159_residues
MQRKALYGLLLLGLLVAPFVGAYPVFVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLATAGYVTGYAMQSLGTAPELGV
LAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYSSICKRRSRTARTACRACRAGGCSGSSICRPISRSTMWCSS

Specific function: Unknown

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16831; Mature: 16831

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKALYGLLLLGLLVAPFVGAYPVFVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGYVTGYAMQSLGTAPELGVLAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYSS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ICKRRSRTARTACRACRAGGCSGSSICRPISRSTMWCSS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQRKALYGLLLLGLLVAPFVGAYPVFVMKVLCFALFAAAFNLLIGFTGLLSFGHAMFLAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGYVTGYAMQSLGTAPELGVLAGTAAATLLGLVVGLFAIRRQGIYFAMITLAFAQMVYSS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ICKRRSRTARTACRACRAGGCSGSSICRPISRSTMWCSS
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA