| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is livM [C]
Identifier: 237814366
GI number: 237814366
Start: 3991953
End: 3992459
Strand: Reverse
Name: livM [C]
Synonym: GBP346_A4164
Alternate gene names: 237814366
Gene position: 3992459-3991953 (Counterclockwise)
Preceding gene: 237814367
Following gene: 237814365
Centisome position: 97.41
GC content: 67.26
Gene sequence:
>507_bases GTGCTCGTCGTGATCGCGTGCGCGTGCTTCTTCATCGTGCGCATCGTGCATTCGCCGTTCGGGCAGGTGCTTGTCGCGAT CAAGGAGAACGAGCCTCGCGCGATATCGCTCGGCTACGATACCGATCGCTTCAAGCTGCTTGCGTTCATCCTGTCGGCCG CGCTCGCGGGGCTTGCCGGCGCGCTGAAAGTGGTCGTGCTCGGCTTCGAGACGCTGAGCGATGCGTACTGGACGATGTCG GGCCTCGTCGTGCTGATGACGCTCGTGGGCGGCATGGGCACGCTGTTCGGCCCGCTCGTCGGCGCGGCGCTGATCGTCGC GCTCGAGGATCGGCTGGGCGACATCGGCGGCTGGCTCGCGTCGGTCACGCACATCGACTGGTTCCGCTCGCTCGGCGAAT CCGCGACGATCGTCACCGGCCTTATCTTCATCGTGTGCGTGCTCGCGTTCAGGCGCGGCATCGTCGGCGAGGTGATCGCC CGGGTGCGGCCGCTGCGCGCGTCGTGA
Upstream 100 bases:
>100_bases AGCGCCGTTCACGCACGGCGAGGACGGCCTGCAGGGCGTGCCGCGCGGGCGGCTGTTCGGGCTCGTCGATCTGTCGTCCG ATCTCGCGCTCTACTATGTG
Downstream 100 bases:
>100_bases ATGGCGAGGACGCGCGATCGTGCGGTGCGCAATGATCGGCGGCCATCCGGTGCGATGCGCGCCGCGCACGGCCGGCCCGG TTCGGCCGGACATGGCCGCC
Product: branched-chain amino acid ABC transporter, permease protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: Branched-Chain Amino Acid Transport Permease; ABC Transporter Permease Protein; ABC-Type Transporter Permease Component; Branched-Chain Amino Acid ABC Transporter Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter Permease; ABC Transporter Membrane Spanning Protein; Permease Component Of ABC Transporter; ABC Transporter Membrane Protein; ABC Transporter; ABC-Type Transport System Permease Protein; Permease Component Of ABC Transporter Protein; Branched-Chain Amino Acid Transport System Permease; Amino Acid ABC Transporter Permease; Amino Acid/Amide ABC Transporter Membrane HAAT Family; Branched-Chain Amino Acid ABC Transporter; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAISLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMS GLVVLMTLVGGMGTLFGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIVGEVIA RVRPLRAS
Sequences:
>Translated_168_residues MLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAISLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMS GLVVLMTLVGGMGTLFGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIVGEVIA RVRPLRAS >Mature_168_residues MLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAISLGYDTDRFKLLAFILSAALAGLAGALKVVVLGFETLSDAYWTMS GLVVLMTLVGGMGTLFGPLVGAALIVALEDRLGDIGGWLASVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIVGEVIA RVRPLRAS
Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17878; Mature: 17878
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAISLGYDTDRFKLLAFILSAALAGLAG CHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH ALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTLFGPLVGAALIVALEDRLGDIGGWLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIVGEVIARVRPLRAS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC >Mature Secondary Structure MLVVIACACFFIVRIVHSPFGQVLVAIKENEPRAISLGYDTDRFKLLAFILSAALAGLAG CHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH ALKVVVLGFETLSDAYWTMSGLVVLMTLVGGMGTLFGPLVGAALIVALEDRLGDIGGWLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVTHIDWFRSLGESATIVTGLIFIVCVLAFRRGIVGEVIARVRPLRAS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA