| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814325
Identifier: 237814325
GI number: 237814325
Start: 3949589
End: 3950032
Strand: Reverse
Name: 237814325
Synonym: GBP346_A4123
Alternate gene names: NA
Gene position: 3950032-3949589 (Counterclockwise)
Preceding gene: 237814326
Following gene: 237814324
Centisome position: 96.38
GC content: 71.17
Gene sequence:
>444_bases GTGGCGGCGCCGTTCGACGCGTACGGCAGCTTCGCGGCGCTGATCGAATGCGTGGCGAACGGCTCACAGGCGCAGGCGTG CGATGCGCTCGAACAGTGCCTCGGCGCGTGCTTCGACGCCGGCGCCGTGACCGCTGCGGCGCTGGCCGCGTCGCAGCGGC AGGCGCGCGACATGTGGGCGCTGCGCGAAGGGCTCGCGATCGATGCGCTGCCGCACCTGCTGAATTTCGACATGAGCCTG CCCATGGCTGGACTGGACACGTTCGCCGCGTGCTGCGACGCCGCGCTTCGCGCACACGGGCCGCATGCCGCGTGTCTGTG CGTCGGCATGCCGGCGACGGCAACGTGCACGTCGGCGTGTCGCTCGCCGATTTGCTCGCGTACGGCGCGGACAGCGTCGA GCGCGTTGTCTACGGGATCGTGCGCGAGATGGGCGGACCGATAG
Upstream 100 bases:
>100_bases CGCAGCTCTGGCGCCGCGTGCGCGCGACGCTGCCGGGCGTCGTCTGCTTCGAGGCGATGCGGCCCGCGTTCTATCGCTGC GTCGCCGCGCACGCGCCGGC
Downstream 100 bases:
>100_bases CGGCCGAGCACGGCATCGGTGCGCTCAAGCGGCCGTTTCCCGGTTACGCGCGCAGCACCGCCGAGATCGCCGTGATGCGG GCGATGAAGGCGGCGTTCGA
Product: FAD linked oxidase
Products: NA
Alternate protein names: FAD/FMN-Containing Dehydrogenases; FAD Linked Oxidase-Like; FAD Linked Oxidase
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAAPFDAYGSFAALIECVANGSQAQACDALEQCLGACFDAGAVTAAALAASQRQARDMWALREGLAIDALPHLLNFDMSL PMAGLDTFAACCDAALRAHGPHAACLCVGMPATATCTSACRSPICSRTARTASSALSTGSCARWADR
Sequences:
>Translated_147_residues MAAPFDAYGSFAALIECVANGSQAQACDALEQCLGACFDAGAVTAAALAASQRQARDMWALREGLAIDALPHLLNFDMSL PMAGLDTFAACCDAALRAHGPHAACLCVGMPATATCTSACRSPICSRTARTASSALSTGSCARWADR >Mature_146_residues AAPFDAYGSFAALIECVANGSQAQACDALEQCLGACFDAGAVTAAALAASQRQARDMWALREGLAIDALPHLLNFDMSLP MAGLDTFAACCDAALRAHGPHAACLCVGMPATATCTSACRSPICSRTARTASSALSTGSCARWADR
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15006; Mature: 14875
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 11.6 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 11.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPFDAYGSFAALIECVANGSQAQACDALEQCLGACFDAGAVTAAALAASQRQARDMWA CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LREGLAIDALPHLLNFDMSLPMAGLDTFAACCDAALRAHGPHAACLCVGMPATATCTSAC HHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH RSPICSRTARTASSALSTGSCARWADR HCHHHHHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure AAPFDAYGSFAALIECVANGSQAQACDALEQCLGACFDAGAVTAAALAASQRQARDMWA CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LREGLAIDALPHLLNFDMSLPMAGLDTFAACCDAALRAHGPHAACLCVGMPATATCTSAC HHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH RSPICSRTARTASSALSTGSCARWADR HCHHHHHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA