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The map label for this gene is glcD [C]

Identifier: 237814324

GI number: 237814324

Start: 3949452

End: 3949985

Strand: Reverse

Name: glcD [C]

Synonym: GBP346_A4122

Alternate gene names: 237814324

Gene position: 3949985-3949452 (Counterclockwise)

Preceding gene: 237814325

Following gene: 237814321

Centisome position: 96.37

GC content: 70.41

Gene sequence:

>534_bases
ATGCGTGGCGAACGGCTCACAGGCGCAGGCGTGCGATGCGCTCGAACAGTGCCTCGGCGCGTGCTTCGACGCCGGCGCCG
TGACCGCTGCGGCGCTGGCCGCGTCGCAGCGGCAGGCGCGCGACATGTGGGCGCTGCGCGAAGGGCTCGCGATCGATGCG
CTGCCGCACCTGCTGAATTTCGACATGAGCCTGCCCATGGCTGGACTGGACACGTTCGCCGCGTGCTGCGACGCCGCGCT
TCGCGCACACGGGCCGCATGCCGCGTGTCTGTGCGTCGGCATGCCGGCGACGGCAACGTGCACGTCGGCGTGTCGCTCGC
CGATTTGCTCGCGTACGGCGCGGACAGCGTCGAGCGCGTTGTCTACGGGATCGTGCGCGAGATGGGCGGACCGATAGCGG
CCGAGCACGGCATCGGTGCGCTCAAGCGGCCGTTTCCCGGTTACGCGCGCAGCACCGCCGAGATCGCCGTGATGCGGGCG
ATGAAGGCGGCGTTCGATCCGCTCGGGATGCTGAATCCGGGGAAGGCGTTGTAG

Upstream 100 bases:

>100_bases
TTCGAGGCGATGCGGCCCGCGTTCTATCGCTGCGTCGCCGCGCACGCGCCGGCGTGGCGGCGCCGTTCGACGCGTACGGC
AGCTTCGCGGCGCTGATCGA

Downstream 100 bases:

>100_bases
CCGTTGCGGCGCGATGCGGCGAGGCGCGGCCCGATTCTCGGCGAAGCCGCGTGCCCGTTCAGTCCGAATCCGCTGAATCC
GGCGAATCCGCCTGCGCGAA

Product: oxidoreductase

Products: NA

Alternate protein names: Oxidoreductase; FAD Linked Oxidase-Like; FAD Linked Oxidase Domain Protein; FAD/FMN-Containing Dehydrogenase; FAD Dependent Oxidoreductase; Glycolate Oxidase Subunit GlcD; D-Lactate Dehydrogenase; Oxidoreductase Protein; FAD Linked Oxidase-Like Protein; FAD-Dependent Oxidoreductase Protein; FAD Linked Oxidase C-Terminal Domain Protein; Lactate Dehydrogenase; FAD Linked Oxidoreductase; FAD-Linked Oxidase-Like Protein; D-Lactate Ferricytochrome C Oxidoreductase; FAD/FMN-Containing Dehydrogenases; Oxidoreductase With NAD+ Or NADP+ As Acceptor; Glycolate Oxidase Subunit D; Glycolate Oxidase; FAD Dehydrogenase; FAD Linked Oxidase; Fad Oxidoreductase; D-2-Hydroxyglutarate Dehydrogenase; Glycolate Oxidase Subunit Glcd; FAD Linked Oxidase C-Terminal Domain-Containing

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRGERLTGAGVRCARTVPRRVLRRRRRDRCGAGRVAAAGARHVGAARRARDRCAAAPAEFRHEPAHGWTGHVRRVLRRRA
SRTRAACRVSVRRHAGDGNVHVGVSLADLLAYGADSVERVVYGIVREMGGPIAAEHGIGALKRPFPGYARSTAEIAVMRA
MKAAFDPLGMLNPGKAL

Sequences:

>Translated_177_residues
MRGERLTGAGVRCARTVPRRVLRRRRRDRCGAGRVAAAGARHVGAARRARDRCAAAPAEFRHEPAHGWTGHVRRVLRRRA
SRTRAACRVSVRRHAGDGNVHVGVSLADLLAYGADSVERVVYGIVREMGGPIAAEHGIGALKRPFPGYARSTAEIAVMRA
MKAAFDPLGMLNPGKAL
>Mature_177_residues
MRGERLTGAGVRCARTVPRRVLRRRRRDRCGAGRVAAAGARHVGAARRARDRCAAAPAEFRHEPAHGWTGHVRRVLRRRA
SRTRAACRVSVRRHAGDGNVHVGVSLADLLAYGADSVERVVYGIVREMGGPIAAEHGIGALKRPFPGYARSTAEIAVMRA
MKAAFDPLGMLNPGKAL

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320023, Length=84, Percent_Identity=36.9047619047619, Blast_Score=72, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6320764, Length=84, Percent_Identity=39.2857142857143, Blast_Score=68, Evalue=7e-13,
Organism=Drosophila melanogaster, GI18921117, Length=84, Percent_Identity=40.4761904761905, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24639277, Length=84, Percent_Identity=40.4761904761905, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24639275, Length=84, Percent_Identity=40.4761904761905, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19142; Mature: 19142

Theoretical pI: Translated: 12.30; Mature: 12.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGERLTGAGVRCARTVPRRVLRRRRRDRCGAGRVAAAGARHVGAARRARDRCAAAPAEF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
RHEPAHGWTGHVRRVLRRRASRTRAACRVSVRRHAGDGNVHVGVSLADLLAYGADSVERV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCHHHHHH
VYGIVREMGGPIAAEHGIGALKRPFPGYARSTAEIAVMRAMKAAFDPLGMLNPGKAL
HHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRGERLTGAGVRCARTVPRRVLRRRRRDRCGAGRVAAAGARHVGAARRARDRCAAAPAEF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
RHEPAHGWTGHVRRVLRRRASRTRAACRVSVRRHAGDGNVHVGVSLADLLAYGADSVERV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCHHHHHH
VYGIVREMGGPIAAEHGIGALKRPFPGYARSTAEIAVMRAMKAAFDPLGMLNPGKAL
HHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA