| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814319
Identifier: 237814319
GI number: 237814319
Start: 3944802
End: 3945233
Strand: Reverse
Name: 237814319
Synonym: GBP346_A4117
Alternate gene names: NA
Gene position: 3945233-3944802 (Counterclockwise)
Preceding gene: 237814320
Following gene: 237814318
Centisome position: 96.26
GC content: 71.76
Gene sequence:
>432_bases ATGCGGCGCGCGGATGCGGCGTGCCGCTTATGCGGCTTCGCACACGTCGATCGCGCCGCCGTCCGCGATCGCCTGGCGCA GCCCCGCGCATTGCGTGCACGCGGAGTCGGATCGAATCGCGCGGCGGCCGCGTGGCCTGTCATCGTCACGACATCGGCCG GCTGGAAGCGGTCGAAACCGAGCTCGCGCCGAACCTCCGAATCGGCTTCGGCCGCGCTTTCATGCGAACGCGAAGCAATG CCGATGCCGCGAGACGCGCGCAAGCAGCACCGCCGACGCATCGCCGAACCTGTGCCGCTGTCGCCGCCGCAGTGCCTTGA GTTGCGCGCGGCCGTGCGCGTTGCGTCGGCGCGGCGCATGGCCCGGCAAGCAACGAGCCTGTCACTCGGCGTGAGCTCGC GCGACGCCGTTCGCACGCACGCGACGCCGTAG
Upstream 100 bases:
>100_bases CAGACGCCGCCCGTTTGTGGCGCATGCCGTGCGCCGCTCGCCGCTTCGGCGCGTTTCTGTCCGCAGTGCGGGACGGCCGT CTCGGCGCAGCGCGGATGAC
Downstream 100 bases:
>100_bases CCGAAGCGGGCCGGACGGCACACGGCACACGGTGCGCGGTTCCGTTCACATTCTTCCGTTTCCCTCCATCGTCCGGTTCA ATCGCACGGTTCGTTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MRRADAACRLCGFAHVDRAAVRDRLAQPRALRARGVGSNRAAAAWPVIVTTSAGWKRSKPSSRRTSESASAALSCEREAM PMPRDARKQHRRRIAEPVPLSPPQCLELRAAVRVASARRMARQATSLSLGVSSRDAVRTHATP
Sequences:
>Translated_143_residues MRRADAACRLCGFAHVDRAAVRDRLAQPRALRARGVGSNRAAAAWPVIVTTSAGWKRSKPSSRRTSESASAALSCEREAM PMPRDARKQHRRRIAEPVPLSPPQCLELRAAVRVASARRMARQATSLSLGVSSRDAVRTHATP >Mature_143_residues MRRADAACRLCGFAHVDRAAVRDRLAQPRALRARGVGSNRAAAAWPVIVTTSAGWKRSKPSSRRTSESASAALSCEREAM PMPRDARKQHRRRIAEPVPLSPPQCLELRAAVRVASARRMARQATSLSLGVSSRDAVRTHATP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15575; Mature: 15575
Theoretical pI: Translated: 12.37; Mature: 12.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRADAACRLCGFAHVDRAAVRDRLAQPRALRARGVGSNRAAAAWPVIVTTSAGWKRSKP CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCC SSRRTSESASAALSCEREAMPMPRDARKQHRRRIAEPVPLSPPQCLELRAAVRVASARRM CCHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ARQATSLSLGVSSRDAVRTHATP HHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRRADAACRLCGFAHVDRAAVRDRLAQPRALRARGVGSNRAAAAWPVIVTTSAGWKRSKP CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCC SSRRTSESASAALSCEREAMPMPRDARKQHRRRIAEPVPLSPPQCLELRAAVRVASARRM CCHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ARQATSLSLGVSSRDAVRTHATP HHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA