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The map label for this gene is ygxB [H]

Identifier: 237814318

GI number: 237814318

Start: 3942879

End: 3944342

Strand: Reverse

Name: ygxB [H]

Synonym: GBP346_A4116

Alternate gene names: 237814318

Gene position: 3944342-3942879 (Counterclockwise)

Preceding gene: 237814319

Following gene: 237814315

Centisome position: 96.24

GC content: 66.39

Gene sequence:

>1464_bases
ATGGATTCATCCAGTTTCCTGACGTCGATGCAGAGCACGCTCGGCGTCTATCTGCCCAAGATCGCGGGCGCGCTCGGCAT
CCTGGTCATCGGCTGGTTGATCGCCGTGATCGTCCGGGCGGGCGTGCGCCGCCTGCTGAGCGCGCTGAAGGTCGATGCGC
GCATCGCCGAAAGTACCGGGCAGGGCACGCAGGTGGAGCGCATCATCGCGGGCGGCCTGTTCTGGCTCGTCCTGCTCGTG
ACCGCGGTCGGCATCTTCAACGTGCTGAACCTCTATGCGATCTCGAACCCGTTCTCGCTGCTCGTCACGAAGATCATCAA
CTATCTGCCGAATCTGCTCGGCGGCGCGGCGCTCACGCTCGTCGCATGGCTGATCGCCTCGCTGCTGCGCAGCTTCGCCG
ACAAGACGCTGAAGGCGAGCAGGATCGACAGCAAGCTGTCGGAGACGGCGGGGATGCGGCCGATGAGCTCGTATCTCGGC
GACGTGCTGTTCTGGCTCGTGATCCTGATGTTCATTCCGGCGATCCTCGCCGCATTCGATCTGAACGGCTTGCTCTCGCC
CGTGCAGCGGATGATCGACAAGATTCTCGCGATCGTGCCGAACGTGTTCGCCGCGGCCGTGATCGGCTTCGTCGGCTGGC
TCGTCGCGCGCATCCTGCGCGGGCTCGTCACGAACCTGCTCGTCGCGGCGGGCGCCGACCGGCTCACGCAAAGCGTCGAG
AGCCCGACGCCCGTGAAGCTCTCGAATCTCGTCGGCACGGTCGTCTTCATCTTCGTGTTCGTGCCGACGCTGATCTCCGC
GCTCGACGCGCTGAAGATCGAGGCGATCTCGCGGCCCGCGACCGACCTGCTCGGCCAGTTCCTCAACGCGGTGCCCGATA
TCGTCGCGGCGGTCGTGATCGTGCTCGTCACGTTCTACGTCGCGCGCTTCGTCGGCGCGCTCGTGCAGAAGCTGCTCGTC
GCGGCGGGCGTCGACGGCCTGCCCGCGATGCTCTGCGTCGAGCGCGTGTTCACGGGGATGCTGCAGCCTTCGGTGCTCGC
CGGCCGGTTGATCGTGTTCTTCGCGATGCTGTTCGCCACCGTCGAAGCCGCGAACCGGCTCGGCTTCACGCAGGTGCGCG
ACGTCGTCACGCTGTTCATCGAATTCGGCGGGCACGTGCTGATGGGCGGCGTGATCCTCGTGATCGGTTTCTGGCTCGCG
GGCCTCGCGCGCCGCGTGATCGAGCAGGCCGACAACGAGCACAGCCGCTTGCTGTCGCGCATCGCGCAGTTCGCGATTCT
CGGCCTCGTGTTCGCAATGGGCTTGCGCGCGATGGGCATCGCGAACGAGATCGTGCAGCTCGCGTTCGGCCTCGTGCTCG
GCGCGATCGCGGTGGCCGTTGCGCTGTCGTTCGGCCTTGGCGGGCGCGAGGCGGCGGGCAAGCTGCTCGATCGCTGGTTC
AATCAGCGCGGCAAGCAGGAATGA

Upstream 100 bases:

>100_bases
CCCGTGTAAGGTCGCCGGCTGCGGAGCCCGGTTTTTCTTCGGAGTCCGCAGGTTGTTCGTCGAGGTCCAACGCAACATCA
CGCTTTTCGGGAGAGCACAT

Downstream 100 bases:

>100_bases
TGCGAACGCGCTGACGGCGGGCGATCGCGCGACGCGCACCCGCACGGCGGCGCGCGTTTCGCATGTGAGCCGCGCGCGGC
GGCATCGCACAAGGGGAGCC

Product: conserved TM helix repeat-containing protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MDSSSFLTSMQSTLGVYLPKIAGALGILVIGWLIAVIVRAGVRRLLSALKVDARIAESTGQGTQVERIIAGGLFWLVLLV
TAVGIFNVLNLYAISNPFSLLVTKIINYLPNLLGGAALTLVAWLIASLLRSFADKTLKASRIDSKLSETAGMRPMSSYLG
DVLFWLVILMFIPAILAAFDLNGLLSPVQRMIDKILAIVPNVFAAAVIGFVGWLVARILRGLVTNLLVAAGADRLTQSVE
SPTPVKLSNLVGTVVFIFVFVPTLISALDALKIEAISRPATDLLGQFLNAVPDIVAAVVIVLVTFYVARFVGALVQKLLV
AAGVDGLPAMLCVERVFTGMLQPSVLAGRLIVFFAMLFATVEAANRLGFTQVRDVVTLFIEFGGHVLMGGVILVIGFWLA
GLARRVIEQADNEHSRLLSRIAQFAILGLVFAMGLRAMGIANEIVQLAFGLVLGAIAVAVALSFGLGGREAAGKLLDRWF
NQRGKQE

Sequences:

>Translated_487_residues
MDSSSFLTSMQSTLGVYLPKIAGALGILVIGWLIAVIVRAGVRRLLSALKVDARIAESTGQGTQVERIIAGGLFWLVLLV
TAVGIFNVLNLYAISNPFSLLVTKIINYLPNLLGGAALTLVAWLIASLLRSFADKTLKASRIDSKLSETAGMRPMSSYLG
DVLFWLVILMFIPAILAAFDLNGLLSPVQRMIDKILAIVPNVFAAAVIGFVGWLVARILRGLVTNLLVAAGADRLTQSVE
SPTPVKLSNLVGTVVFIFVFVPTLISALDALKIEAISRPATDLLGQFLNAVPDIVAAVVIVLVTFYVARFVGALVQKLLV
AAGVDGLPAMLCVERVFTGMLQPSVLAGRLIVFFAMLFATVEAANRLGFTQVRDVVTLFIEFGGHVLMGGVILVIGFWLA
GLARRVIEQADNEHSRLLSRIAQFAILGLVFAMGLRAMGIANEIVQLAFGLVLGAIAVAVALSFGLGGREAAGKLLDRWF
NQRGKQE
>Mature_487_residues
MDSSSFLTSMQSTLGVYLPKIAGALGILVIGWLIAVIVRAGVRRLLSALKVDARIAESTGQGTQVERIIAGGLFWLVLLV
TAVGIFNVLNLYAISNPFSLLVTKIINYLPNLLGGAALTLVAWLIASLLRSFADKTLKASRIDSKLSETAGMRPMSSYLG
DVLFWLVILMFIPAILAAFDLNGLLSPVQRMIDKILAIVPNVFAAAVIGFVGWLVARILRGLVTNLLVAAGADRLTQSVE
SPTPVKLSNLVGTVVFIFVFVPTLISALDALKIEAISRPATDLLGQFLNAVPDIVAAVVIVLVTFYVARFVGALVQKLLV
AAGVDGLPAMLCVERVFTGMLQPSVLAGRLIVFFAMLFATVEAANRLGFTQVRDVVTLFIEFGGHVLMGGVILVIGFWLA
GLARRVIEQADNEHSRLLSRIAQFAILGLVFAMGLRAMGIANEIVQLAFGLVLGAIAVAVALSFGLGGREAAGKLLDRWF
NQRGKQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008910 [H]

Pfam domain/function: PF05552 TM_helix [H]

EC number: NA

Molecular weight: Translated: 51993; Mature: 51993

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCC
>Mature Secondary Structure
MDSSSFLTSMQSTLGVYLPKIAGALGILVIGWLIAVIVRAGVRRLLSALKVDARIAESTG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QGTQVERIIAGGLFWLVLLVTAVGIFNVLNLYAISNPFSLLVTKIINYLPNLLGGAALTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VAWLIASLLRSFADKTLKASRIDSKLSETAGMRPMSSYLGDVLFWLVILMFIPAILAAFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNGLLSPVQRMIDKILAIVPNVFAAAVIGFVGWLVARILRGLVTNLLVAAGADRLTQSVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
SPTPVKLSNLVGTVVFIFVFVPTLISALDALKIEAISRPATDLLGQFLNAVPDIVAAVVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VLVTFYVARFVGALVQKLLVAAGVDGLPAMLCVERVFTGMLQPSVLAGRLIVFFAMLFAT
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VEAANRLGFTQVRDVVTLFIEFGGHVLMGGVILVIGFWLAGLARRVIEQADNEHSRLLSR
HHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IAQFAILGLVFAMGLRAMGIANEIVQLAFGLVLGAIAVAVALSFGLGGREAAGKLLDRWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NQRGKQE
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 8144469 [H]