| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814294
Identifier: 237814294
GI number: 237814294
Start: 3917066
End: 3917860
Strand: Direct
Name: 237814294
Synonym: GBP346_A4090
Alternate gene names: NA
Gene position: 3917066-3917860 (Clockwise)
Preceding gene: 237814292
Following gene: 237814295
Centisome position: 95.57
GC content: 75.09
Gene sequence:
>795_bases ATGCTCGCGCTGAAGCTCACGCTGGTCCCGCTGTTCCTGCTGCTCGTGTCGATCGCGGGCAGAAGGTGGGGGCCATCGAT CGCGGGCTGGCTCGCCGGGCTGCCGGTCGTCGCCGGCCCGATTCTCTTCCTCGTCGCCGTCGAACGCGGCCCCGCGTTCG GCGCGCATGCGGCGTTGCTGTCGCTCTCCGCGATCGCGGCGTCCGAAGCGTTCAGCTTCGCGTACGCGTGGACCTGCCGC CGACATCGATGGCCGCTCGCGCTCGCGGCGGGCCTCGCCGCCTGGGCAGCCGCCGCGAGCGCGCTCGCACGGCTGCCCGC GACGCCGCCCGCCGCGACGGCCGTCGCATTCGCGGCAACATGCTTCGGGCAGTCCTGCCTGCCGCGCGGCGCGACGCTCG CGCCGCGCGCGCCGTTGTCGCACGCCGATCTGGCCGGCCGGCTCGCCGCGGGCGCGGCGCTCGCATTGGCCGTCACGTCG CTGGCCGGCGCGCTCGGTCCCGCCTGGAGCGGTCTCCTTGCCGTCTTTCCGCTGCTCGGCAGCGTACTGGCGGTCTCGTC GCACCGCGCGCACGGGCCCGACTTCGTCGTCCCTCTGCTGCGGGGCATGGTGTTCGGCCGCTTCTCGTTCGCCGCGTTCT GCCTGTGCGTCGCGCTCACGCTGCCGCGTCAGCCGGCGCTTCAGGCGTTCGCCGAAGCCGCCGCGCTGTCGGTTGCCGTA CAGGGCGCGACGAAGCGGCTGGCCGCGCGAGGCCCCCGGCCAACCGCGCTCGCGCAGACGGCGACGCCCGATTGA
Upstream 100 bases:
>100_bases TTGCCGGCGATGCCGCGCGTGCGGGGGCGGACGATCCGCGCGTTCGCGCGGCATGGCGCGGCGCTCTGATAGCATGCCCC TTTTACCGGACGCCCCCGCG
Downstream 100 bases:
>100_bases CCCGCGCGCGCCGCTATCATGAGCGCACACTTTCGATCTCGACGCCCGTCACCATGGAACGCCATATGGGATACCACTTC GCCACCGCCGCGCTCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MLALKLTLVPLFLLLVSIAGRRWGPSIAGWLAGLPVVAGPILFLVAVERGPAFGAHAALLSLSAIAASEAFSFAYAWTCR RHRWPLALAAGLAAWAAAASALARLPATPPAATAVAFAATCFGQSCLPRGATLAPRAPLSHADLAGRLAAGAALALAVTS LAGALGPAWSGLLAVFPLLGSVLAVSSHRAHGPDFVVPLLRGMVFGRFSFAAFCLCVALTLPRQPALQAFAEAAALSVAV QGATKRLAARGPRPTALAQTATPD
Sequences:
>Translated_264_residues MLALKLTLVPLFLLLVSIAGRRWGPSIAGWLAGLPVVAGPILFLVAVERGPAFGAHAALLSLSAIAASEAFSFAYAWTCR RHRWPLALAAGLAAWAAAASALARLPATPPAATAVAFAATCFGQSCLPRGATLAPRAPLSHADLAGRLAAGAALALAVTS LAGALGPAWSGLLAVFPLLGSVLAVSSHRAHGPDFVVPLLRGMVFGRFSFAAFCLCVALTLPRQPALQAFAEAAALSVAV QGATKRLAARGPRPTALAQTATPD >Mature_264_residues MLALKLTLVPLFLLLVSIAGRRWGPSIAGWLAGLPVVAGPILFLVAVERGPAFGAHAALLSLSAIAASEAFSFAYAWTCR RHRWPLALAAGLAAWAAAASALARLPATPPAATAVAFAATCFGQSCLPRGATLAPRAPLSHADLAGRLAAGAALALAVTS LAGALGPAWSGLLAVFPLLGSVLAVSSHRAHGPDFVVPLLRGMVFGRFSFAAFCLCVALTLPRQPALQAFAEAAALSVAV QGATKRLAARGPRPTALAQTATPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26718; Mature: 26718
Theoretical pI: Translated: 12.01; Mature: 12.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALKLTLVPLFLLLVSIAGRRWGPSIAGWLAGLPVVAGPILFLVAVERGPAFGAHAALL CEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHH SLSAIAASEAFSFAYAWTCRRHRWPLALAAGLAAWAAAASALARLPATPPAATAVAFAAT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH CFGQSCLPRGATLAPRAPLSHADLAGRLAAGAALALAVTSLAGALGPAWSGLLAVFPLLG HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH SVLAVSSHRAHGPDFVVPLLRGMVFGRFSFAAFCLCVALTLPRQPALQAFAEAAALSVAV HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QGATKRLAARGPRPTALAQTATPD HHHHHHHHHCCCCCCHHCCCCCCC >Mature Secondary Structure MLALKLTLVPLFLLLVSIAGRRWGPSIAGWLAGLPVVAGPILFLVAVERGPAFGAHAALL CEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHH SLSAIAASEAFSFAYAWTCRRHRWPLALAAGLAAWAAAASALARLPATPPAATAVAFAAT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH CFGQSCLPRGATLAPRAPLSHADLAGRLAAGAALALAVTSLAGALGPAWSGLLAVFPLLG HHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH SVLAVSSHRAHGPDFVVPLLRGMVFGRFSFAAFCLCVALTLPRQPALQAFAEAAALSVAV HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QGATKRLAARGPRPTALAQTATPD HHHHHHHHHCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA