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The map label for this gene is 237814292

Identifier: 237814292

GI number: 237814292

Start: 3913534

End: 3914361

Strand: Direct

Name: 237814292

Synonym: GBP346_A4088

Alternate gene names: NA

Gene position: 3913534-3914361 (Clockwise)

Preceding gene: 237814291

Following gene: 237814294

Centisome position: 95.49

GC content: 69.81

Gene sequence:

>828_bases
GTGATCCCCATCGCGATCATCGTCCTGTTCGCCACCTACGCCAACCACGCGTTCCGCACCGGCGCCGGCACCGACGGCCT
CTCCGACGAAGCCGTCGCAAAACGCATCGCCCCGCTCGCGCAGGTCGATATCAAGGACGCCAACGCACCGCGCGTCTACA
AAACCGGTGAGGAAGTCTACAAGGCCGTCTGCGTCACCTGTCACGGCACCGGCGCCGCCGGGGCGCCGAAATTCGGCGAC
GCCGCCGCCTGGGCGCCGCGCATCGCAGCCGGCTATGACGAAGTCCTGCATCTCGCGCTGACCGGCAAGGGCGCGATGCC
CCCGCGCGGCGGCACGAACCCCGACGACTATAGCGATTACGAAATCGCGCGCGCAGTCGTCTATATGGCGAATCAGGGCG
GCGCGAAGTTCGCCGAGCCGGCCCAGCCCGCCGCGAACGCCGCGCCCGCATCGGGCGCCGCCGCCGCATCCGCGCCGGGC
GCATCCGATGCGGCGGCCAACTCGCAGGCCGCCGCCGCAATGGCCGCAATCGCCGCGCTGCCGAAAGCCGGCGAAGCACC
CGCGGCCGGCGCGAACGCGGAAAGCTCGGCGTCGGCCGGCAAGGCGCTGTACGAATCGACGTGCCAGGCCTGCCATGCCA
CCGGCGTGCTGAACGCGCCGAAATTCGGCAACAAGGCCGACTGGGCCCCGCGCCTGAAGGACTCGATGGATACCGTCTAT
AACTTCGCGCTGCACGGCAAGGGCGCGATGCCGCCGAAGGGCGGCTCGAACGCGTCGGATGCCGACGTGAAGGCGGCCGT
CGACTATATGGTCAACGCCGCCAAGTAA

Upstream 100 bases:

>100_bases
AATTCCTATTCATGGAGACGAGGCAAGCATGAGCGAAGCACCCCACGGAGCCCCCATCAAAACCCCCGGGCAACTCATCG
CAGTTGTCATCGCCTCATTC

Downstream 100 bases:

>100_bases
CCCGCCCCGCCCACACGGCGAACGAAACCCCCCCGCGCCGCGCGAGCAATGCGGGGGTTTTCGCTTTGCCGCAGCCGGCC
ATCGAAAAACAGCCGCGCAT

Product: cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MIPIAIIVLFATYANHAFRTGAGTDGLSDEAVAKRIAPLAQVDIKDANAPRVYKTGEEVYKAVCVTCHGTGAAGAPKFGD
AAAWAPRIAAGYDEVLHLALTGKGAMPPRGGTNPDDYSDYEIARAVVYMANQGGAKFAEPAQPAANAAPASGAAAASAPG
ASDAAANSQAAAAMAAIAALPKAGEAPAAGANAESSASAGKALYESTCQACHATGVLNAPKFGNKADWAPRLKDSMDTVY
NFALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK

Sequences:

>Translated_275_residues
MIPIAIIVLFATYANHAFRTGAGTDGLSDEAVAKRIAPLAQVDIKDANAPRVYKTGEEVYKAVCVTCHGTGAAGAPKFGD
AAAWAPRIAAGYDEVLHLALTGKGAMPPRGGTNPDDYSDYEIARAVVYMANQGGAKFAEPAQPAANAAPASGAAAASAPG
ASDAAANSQAAAAMAAIAALPKAGEAPAAGANAESSASAGKALYESTCQACHATGVLNAPKFGNKADWAPRLKDSMDTVY
NFALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK
>Mature_275_residues
MIPIAIIVLFATYANHAFRTGAGTDGLSDEAVAKRIAPLAQVDIKDANAPRVYKTGEEVYKAVCVTCHGTGAAGAPKFGD
AAAWAPRIAAGYDEVLHLALTGKGAMPPRGGTNPDDYSDYEIARAVVYMANQGGAKFAEPAQPAANAAPASGAAAASAPG
ASDAAANSQAAAAMAAIAALPKAGEAPAAGANAESSASAGKALYESTCQACHATGVLNAPKFGNKADWAPRLKDSMDTVY
NFALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 27494; Mature: 27494

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPIAIIVLFATYANHAFRTGAGTDGLSDEAVAKRIAPLAQVDIKDANAPRVYKTGEEVY
CCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCEECCHHHHH
KAVCVTCHGTGAAGAPKFGDAAAWAPRIAAGYDEVLHLALTGKGAMPPRGGTNPDDYSDY
HHHHHEECCCCCCCCCCCCCHHHHCHHHHHCHHHHEEEEEECCCCCCCCCCCCCCCCCHH
EIARAVVYMANQGGAKFAEPAQPAANAAPASGAAAASAPGASDAAANSQAAAAMAAIAAL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHC
PKAGEAPAAGANAESSASAGKALYESTCQACHATGVLNAPKFGNKADWAPRLKDSMDTVY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
NFALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPIAIIVLFATYANHAFRTGAGTDGLSDEAVAKRIAPLAQVDIKDANAPRVYKTGEEVY
CCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCEECCHHHHH
KAVCVTCHGTGAAGAPKFGDAAAWAPRIAAGYDEVLHLALTGKGAMPPRGGTNPDDYSDY
HHHHHEECCCCCCCCCCCCCHHHHCHHHHHCHHHHEEEEEECCCCCCCCCCCCCCCCCHH
EIARAVVYMANQGGAKFAEPAQPAANAAPASGAAAASAPGASDAAANSQAAAAMAAIAAL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHC
PKAGEAPAAGANAESSASAGKALYESTCQACHATGVLNAPKFGNKADWAPRLKDSMDTVY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
NFALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]