| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814281
Identifier: 237814281
GI number: 237814281
Start: 3904033
End: 3904461
Strand: Reverse
Name: 237814281
Synonym: GBP346_A4076
Alternate gene names: NA
Gene position: 3904461-3904033 (Counterclockwise)
Preceding gene: 237814282
Following gene: 237814280
Centisome position: 95.26
GC content: 64.57
Gene sequence:
>429_bases ATGAAGAAGACCTTCAAGACGGGAGCCTGGCTGCCGGTCGCGGCAGCCGGCGTGCTGCTCGCGGGCTGCGCGGCGAATCA GCCGAAGCCGCTCTATCAATGGGACGGCTATCAGCCGCAAGTCTACGAATACTTCAAGGGGCAAAAGAGCCCCGAGGACC AGATCGACGCGCTCGAGAAGGCGCTGCAGCAGATCCGCGCAAAGGGCAACCGCCCGCCGCCCGGCTTCGAGGCGCATCTC GGCATGCTATACGCGAGCGTCGGCAAGGAGCAGCAGGCCGAGCAGGCGTTCCAGGCCGAGAAGGCGTCGTTTCCCGAATC GTCGCCGTTCATGGATTTCCTGCTGAAGAAGAAAGCCGCCGCGCCGCAAGCGAAGCCGTCAGCGCCCGCGCAGCCGCAAA CCCAAACCCAAACGCAGGCGCAACAATGA
Upstream 100 bases:
>100_bases TCGAACAGGTCGACGCGGGCGCGCTCGCGTCCGGCAAGTAGGCGCGCCGCGCGGCGCGGACGAATCCGCTCATCCATCGT TTCCATCGACAACGACAATA
Downstream 100 bases:
>100_bases GGGCCGCCATGTTCAAGTTCATTACCGCGCGGCGCCTGGCGGCCGCGTCCGTGCTGGCGCTGCTCGCCGCATGCGCCGCG CCCGCGAAGCATGTCGACTA
Product: lipoprotein
Products: NA
Alternate protein names: Periplasmic Protein
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKKTFKTGAWLPVAAAGVLLAGCAANQPKPLYQWDGYQPQVYEYFKGQKSPEDQIDALEKALQQIRAKGNRPPPGFEAHL GMLYASVGKEQQAEQAFQAEKASFPESSPFMDFLLKKKAAAPQAKPSAPAQPQTQTQTQAQQ
Sequences:
>Translated_142_residues MKKTFKTGAWLPVAAAGVLLAGCAANQPKPLYQWDGYQPQVYEYFKGQKSPEDQIDALEKALQQIRAKGNRPPPGFEAHL GMLYASVGKEQQAEQAFQAEKASFPESSPFMDFLLKKKAAAPQAKPSAPAQPQTQTQTQAQQ >Mature_142_residues MKKTFKTGAWLPVAAAGVLLAGCAANQPKPLYQWDGYQPQVYEYFKGQKSPEDQIDALEKALQQIRAKGNRPPPGFEAHL GMLYASVGKEQQAEQAFQAEKASFPESSPFMDFLLKKKAAAPQAKPSAPAQPQTQTQTQAQQ
Specific function: Unknown
COG id: COG4259
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15552; Mature: 15552
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFKTGAWLPVAAAGVLLAGCAANQPKPLYQWDGYQPQVYEYFKGQKSPEDQIDALEK CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH ALQQIRAKGNRPPPGFEAHLGMLYASVGKEQQAEQAFQAEKASFPESSPFMDFLLKKKAA HHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC APQAKPSAPAQPQTQTQTQAQQ CCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MKKTFKTGAWLPVAAAGVLLAGCAANQPKPLYQWDGYQPQVYEYFKGQKSPEDQIDALEK CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH ALQQIRAKGNRPPPGFEAHLGMLYASVGKEQQAEQAFQAEKASFPESSPFMDFLLKKKAA HHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC APQAKPSAPAQPQTQTQTQAQQ CCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA