| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is acpA_2
Identifier: 237814277
GI number: 237814277
Start: 3901150
End: 3902811
Strand: Reverse
Name: acpA_2
Synonym: GBP346_A4072
Alternate gene names: NA
Gene position: 3902811-3901150 (Counterclockwise)
Preceding gene: 237814278
Following gene: 237814274
Centisome position: 95.22
GC content: 69.19
Gene sequence:
>1662_bases GTGACTGACAAGCATCCCCCGTCGACCGACCTTCCCGAAGACCCCGATCGCCGCCGCGTGCTCGGCGGCATCGCGGCGCT CGGCGCGAGCGTCGCGCTCGCCGGCTGCGAGACGGCCGTGCCCGCCGCGCCGCGCTCGGCCGCCGAACTGCGGCTCGACG CCGTGCTGCGCCGCGAAGTGCGCAACATCGTCGTGATCTACGCGGAGAATCGCAGCTTCGCGAACCTGTTCGGCGATTTC CCCGGCGTGCAGCAGCCGCTCGGCGCGGTATCGCCCGAGCGCTACGCGCAGCTCGATCGCGACGGCAAGACGCCGCTCGC GACGCTGCCGAAAATCTGGGGCGGCCTCGTGCCGCAGGCGCAAGTCGTCGACGGCAAGCGCTACATGATCGGCGAGCACG ACATTGTCGGGCTGCCGAACGCGCCGTTCGTGATTCCCGATGCGCAGGGCAAGCCGCTGCCGAACGGCGTGATCACGCGC GACTTGTGGCATCGCTTCTATCAGAACCAGATGCAGATCAACGGCGGCCGCAACGACCAGTTCGCCGCCTGGGCCGATTC GGGCGGCCTCGTGATGGGGCATTACCGCAATTCGGCCGAGACGCTGCGGCTGTGGAATCTCGCGCGCGGGTACACGCTCT GCGACAACTTCTTCATGGCCGCGTTCGGCGGCTCGTGGCTGAACCACATCTTCCTCATTTCCGCGCAGGCGCCGCTTTAT CCGGACGTGCACCAGAGCCCGGCGAAGCATCTCGTATCCGTCGTCGAAGGCGACGATCCGGCCGGCACGCGGCTGAAGCT GGCCGCGGATTCGCCCGCATCGGCGCTCGACGGCCCGCCGAAATTCGAGAACGATGGCCTCTTCACGCCGGACGGCTACG CCGTGAACACGATGGCGCCGCCGTATCAGCCGAGCAGCGTGCGCCCGCCCGTCGAAGGCAATCCGGCGTACGCGGACCCG TCGAACCCGCGCGTGCTGCCGCCGCAGCATTACGCGACGATCGGCGATCGCCTGTCGGAGAAGGGCGTCGACTGGGCGTG GTACGGCGGTGCGTGGCAATACGCGCTCGAGCATCGGGACACGGGCTCGGTGCCGGACTTCCAGTATCACCATCAGCCGT TCAATTACTTCGCGAGCTACGCGCCGGGCACCGAGGCGCGGCGCCGGCACCTGCGCGACGCGGGCCTCGGCGACGATCCG TCGACGAACCATCTGATCGCCGACATCGACGCGGGCCGCCTGCCGACCGTCACGTTCTACAAGCCGCAGGGCAACCTGAA CATGCACGCGGGCTATGCGGATGTCGCGTCGGGCGACCGGCACATCGCGACGGTGATCGAGCACATCATGCGCGGCCCGC AGTGGGCGCACACGGTCGTGATCCTGACGGTCGACGAGAACGGCGGCTGGTGGGACCCGGTGTCGCCGCCGAAGGGCGAC CGGTGGGGGCCGGGTTCGCGGATTCCGGCGATGGTGATCTCGCCGTTCGCGAAGAAGGGCTACGTCGATCACACGCTGTA CGACACGAACTCGATCCTGCGTTTCATCTCGCGCGTGCACGGGCTCGCGCCGCTCGACGGCGTGCTCGCGCGTGAGCGCG CGTTCGCGGCGCGCGGCGCGCAGCCGCCGGGCGATCTCACCGAAGCGCTCGACCTCGGCTGA
Upstream 100 bases:
>100_bases TCGCGGCCGCCGCCAGGCGAAGCCGGCGATGCGCGCGTCACCGGTTCGGGCGCCGACGCGCGGCGGACCGTCCAACCAAC CAGAAGATCGAGGAGCAGAA
Downstream 100 bases:
>100_bases GGCTCGGCGGGAAACCGGCTGCGGCCAGCCGGTTTCGTCGCCGCACGTGCCGGCGCGTCGGCAACGACGGCGCTGGCCGC ATCGCGCATGAGCGCCGCTC
Product: acid phosphatase AcpA
Products: NA
Alternate protein names: Acid Phosphatase; Phospholipase C; Phospholipase C Phosphocholine-Specific; Acid Phosphatase AcpA; Phospholipase C Protein; Acid Phosphatase Protein; Phosphoesterase Family Protein; Phospholipase; Twin-Arginine Translocation Pathway Signal; Phosphesterase; Non-Hemolytic Phospholipase C; Phosphoesterase Familiy Protein; Membrane Associated Phosphoesterase
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MTDKHPPSTDLPEDPDRRRVLGGIAALGASVALAGCETAVPAAPRSAAELRLDAVLRREVRNIVVIYAENRSFANLFGDF PGVQQPLGAVSPERYAQLDRDGKTPLATLPKIWGGLVPQAQVVDGKRYMIGEHDIVGLPNAPFVIPDAQGKPLPNGVITR DLWHRFYQNQMQINGGRNDQFAAWADSGGLVMGHYRNSAETLRLWNLARGYTLCDNFFMAAFGGSWLNHIFLISAQAPLY PDVHQSPAKHLVSVVEGDDPAGTRLKLAADSPASALDGPPKFENDGLFTPDGYAVNTMAPPYQPSSVRPPVEGNPAYADP SNPRVLPPQHYATIGDRLSEKGVDWAWYGGAWQYALEHRDTGSVPDFQYHHQPFNYFASYAPGTEARRRHLRDAGLGDDP STNHLIADIDAGRLPTVTFYKPQGNLNMHAGYADVASGDRHIATVIEHIMRGPQWAHTVVILTVDENGGWWDPVSPPKGD RWGPGSRIPAMVISPFAKKGYVDHTLYDTNSILRFISRVHGLAPLDGVLARERAFAARGAQPPGDLTEALDLG
Sequences:
>Translated_553_residues MTDKHPPSTDLPEDPDRRRVLGGIAALGASVALAGCETAVPAAPRSAAELRLDAVLRREVRNIVVIYAENRSFANLFGDF PGVQQPLGAVSPERYAQLDRDGKTPLATLPKIWGGLVPQAQVVDGKRYMIGEHDIVGLPNAPFVIPDAQGKPLPNGVITR DLWHRFYQNQMQINGGRNDQFAAWADSGGLVMGHYRNSAETLRLWNLARGYTLCDNFFMAAFGGSWLNHIFLISAQAPLY PDVHQSPAKHLVSVVEGDDPAGTRLKLAADSPASALDGPPKFENDGLFTPDGYAVNTMAPPYQPSSVRPPVEGNPAYADP SNPRVLPPQHYATIGDRLSEKGVDWAWYGGAWQYALEHRDTGSVPDFQYHHQPFNYFASYAPGTEARRRHLRDAGLGDDP STNHLIADIDAGRLPTVTFYKPQGNLNMHAGYADVASGDRHIATVIEHIMRGPQWAHTVVILTVDENGGWWDPVSPPKGD RWGPGSRIPAMVISPFAKKGYVDHTLYDTNSILRFISRVHGLAPLDGVLARERAFAARGAQPPGDLTEALDLG >Mature_552_residues TDKHPPSTDLPEDPDRRRVLGGIAALGASVALAGCETAVPAAPRSAAELRLDAVLRREVRNIVVIYAENRSFANLFGDFP GVQQPLGAVSPERYAQLDRDGKTPLATLPKIWGGLVPQAQVVDGKRYMIGEHDIVGLPNAPFVIPDAQGKPLPNGVITRD LWHRFYQNQMQINGGRNDQFAAWADSGGLVMGHYRNSAETLRLWNLARGYTLCDNFFMAAFGGSWLNHIFLISAQAPLYP DVHQSPAKHLVSVVEGDDPAGTRLKLAADSPASALDGPPKFENDGLFTPDGYAVNTMAPPYQPSSVRPPVEGNPAYADPS NPRVLPPQHYATIGDRLSEKGVDWAWYGGAWQYALEHRDTGSVPDFQYHHQPFNYFASYAPGTEARRRHLRDAGLGDDPS TNHLIADIDAGRLPTVTFYKPQGNLNMHAGYADVASGDRHIATVIEHIMRGPQWAHTVVILTVDENGGWWDPVSPPKGDR WGPGSRIPAMVISPFAKKGYVDHTLYDTNSILRFISRVHGLAPLDGVLARERAFAARGAQPPGDLTEALDLG
Specific function: Unknown
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60317; Mature: 60186
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKHPPSTDLPEDPDRRRVLGGIAALGASVALAGCETAVPAAPRSAAELRLDAVLRREV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH RNIVVIYAENRSFANLFGDFPGVQQPLGAVSPERYAQLDRDGKTPLATLPKIWGGLVPQA CCEEEEEECCCCHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCE QVVDGKRYMIGEHDIVGLPNAPFVIPDAQGKPLPNGVITRDLWHRFYQNQMQINGGRNDQ EEECCCEEEECCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCC FAAWADSGGLVMGHYRNSAETLRLWNLARGYTLCDNFFMAAFGGSWLNHIFLISAQAPLY EEEEECCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCEEEEEECCCCCC PDVHQSPAKHLVSVVEGDDPAGTRLKLAADSPASALDGPPKFENDGLFTPDGYAVNTMAP CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEECCCCC PYQPSSVRPPVEGNPAYADPSNPRVLPPQHYATIGDRLSEKGVDWAWYGGAWQYALEHRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCEEEEEEECCC TGSVPDFQYHHQPFNYFASYAPGTEARRRHLRDAGLGDDPSTNHLIADIDAGRLPTVTFY CCCCCCCHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEE KPQGNLNMHAGYADVASGDRHIATVIEHIMRGPQWAHTVVILTVDENGGWWDPVSPPKGD CCCCCCEEECCCHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCC RWGPGSRIPAMVISPFAKKGYVDHTLYDTNSILRFISRVHGLAPLDGVLARERAFAARGA CCCCCCCCCHHHHCHHHHCCCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC QPPGDLTEALDLG CCCCHHHHHHCCC >Mature Secondary Structure TDKHPPSTDLPEDPDRRRVLGGIAALGASVALAGCETAVPAAPRSAAELRLDAVLRREV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH RNIVVIYAENRSFANLFGDFPGVQQPLGAVSPERYAQLDRDGKTPLATLPKIWGGLVPQA CCEEEEEECCCCHHHHHCCCCCHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCE QVVDGKRYMIGEHDIVGLPNAPFVIPDAQGKPLPNGVITRDLWHRFYQNQMQINGGRNDQ EEECCCEEEECCCCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCC FAAWADSGGLVMGHYRNSAETLRLWNLARGYTLCDNFFMAAFGGSWLNHIFLISAQAPLY EEEEECCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCEEEEEECCCCCC PDVHQSPAKHLVSVVEGDDPAGTRLKLAADSPASALDGPPKFENDGLFTPDGYAVNTMAP CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCEEECCCCC PYQPSSVRPPVEGNPAYADPSNPRVLPPQHYATIGDRLSEKGVDWAWYGGAWQYALEHRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCEEEEEEECCC TGSVPDFQYHHQPFNYFASYAPGTEARRRHLRDAGLGDDPSTNHLIADIDAGRLPTVTFY CCCCCCCHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEE KPQGNLNMHAGYADVASGDRHIATVIEHIMRGPQWAHTVVILTVDENGGWWDPVSPPKGD CCCCCCEEECCCHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCC RWGPGSRIPAMVISPFAKKGYVDHTLYDTNSILRFISRVHGLAPLDGVLARERAFAARGA CCCCCCCCCHHHHCHHHHCCCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC QPPGDLTEALDLG CCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA