| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814274
Identifier: 237814274
GI number: 237814274
Start: 3899258
End: 3900058
Strand: Reverse
Name: 237814274
Synonym: GBP346_A4069
Alternate gene names: NA
Gene position: 3900058-3899258 (Counterclockwise)
Preceding gene: 237814277
Following gene: 237814273
Centisome position: 95.16
GC content: 59.43
Gene sequence:
>801_bases GTGTCGCGCGTGTCGCGCGCGCGCCGAAGCGTACCGCTCATCGGCTCGGGGCGCACCGGATCGATCGACAGGCGAATCCG GCGTCGACCGGCCGCGCGCGGCGCGCATGTGTCGCGCGAGCGCGATGCCGATGCGCGCCGGCTCTTCGCCAATGCGTGCC GATCCGCTTCGCGCCTGCTCGTTTGCGTGACGGGCGACAAAATAAACAATGGCGATTTGAATCTTCATACAATACAATTC GCTGTCGATTTTCCGACATTAAATAAACGCCGGCATCGTCACGATGCTTTTCCCGAATACACGGCGCGACGAGGATATCG CGCAGTCTTCGGGCAGTCGCGTACGAGCGGCGGTTCATGTTTTCCGTTCAATAACAAGATTGCGTTACGGGACCTCATCT TGCGCACAAAAATCGCCGCTGCATGGCTTGCAGCCCTCGTTCCATTCGCCAGCCTGGCATCCACTTCGATCCAGATCGAC GCCAGGCAAAACTGTTTGGCCACCGTCTTCGGCAAAGTATCGAACGGCGCTTCGGCGACGTTCCAACTCGCGCCGGGACG GTATGTCGTCTCGATCGCATCGAACAACATGAGTTGCTCGGGCGGCTCGCTGACGAACGGCTGCTTGATCGATACCGTGA TGCTGCAAGGCGGGAACGGAAATAGCCATTGGGGTGTTGCCATCAACCGGCCGACCGTGGTGGACGTTCCGAGTACATCG GGACTTTTCGCCTACGTCAGCGACGACGTGTGTTCCGACAATACCGGCCAGGCTACGTTGCTGATACAGACCGCTTACTG A
Upstream 100 bases:
>100_bases AGCGTATCGGCGAGCGGGCTCGGGATGGTCGACCGGCCGCTTGGGGGCAGGGCGGTCGCGACGCGGCTCGCGCCGACCGC CACGGCCGCACGCGTCACGC
Downstream 100 bases:
>100_bases ACCCGTGCCGCGGCGCGGCTCGACGGCGCGCCCGGTTATCGAACGCCAAGTGGGCAAACCCGGTTGAGCCGGAGGCGCAA GGGCGAGCGTCGTCTGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSRVSRARRSVPLIGSGRTGSIDRRIRRRPAARGAHVSRERDADARRLFANACRSASRLLVCVTGDKINNGDLNLHTIQF AVDFPTLNKRRHRHDAFPEYTARRGYRAVFGQSRTSGGSCFPFNNKIALRDLILRTKIAAAWLAALVPFASLASTSIQID ARQNCLATVFGKVSNGASATFQLAPGRYVVSIASNNMSCSGGSLTNGCLIDTVMLQGGNGNSHWGVAINRPTVVDVPSTS GLFAYVSDDVCSDNTGQATLLIQTAY
Sequences:
>Translated_266_residues MSRVSRARRSVPLIGSGRTGSIDRRIRRRPAARGAHVSRERDADARRLFANACRSASRLLVCVTGDKINNGDLNLHTIQF AVDFPTLNKRRHRHDAFPEYTARRGYRAVFGQSRTSGGSCFPFNNKIALRDLILRTKIAAAWLAALVPFASLASTSIQID ARQNCLATVFGKVSNGASATFQLAPGRYVVSIASNNMSCSGGSLTNGCLIDTVMLQGGNGNSHWGVAINRPTVVDVPSTS GLFAYVSDDVCSDNTGQATLLIQTAY >Mature_265_residues SRVSRARRSVPLIGSGRTGSIDRRIRRRPAARGAHVSRERDADARRLFANACRSASRLLVCVTGDKINNGDLNLHTIQFA VDFPTLNKRRHRHDAFPEYTARRGYRAVFGQSRTSGGSCFPFNNKIALRDLILRTKIAAAWLAALVPFASLASTSIQIDA RQNCLATVFGKVSNGASATFQLAPGRYVVSIASNNMSCSGGSLTNGCLIDTVMLQGGNGNSHWGVAINRPTVVDVPSTSG LFAYVSDDVCSDNTGQATLLIQTAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28677; Mature: 28546
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVSRARRSVPLIGSGRTGSIDRRIRRRPAARGAHVSRERDADARRLFANACRSASRLL CCHHHHHHHCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE VCVTGDKINNGDLNLHTIQFAVDFPTLNKRRHRHDAFPEYTARRGYRAVFGQSRTSGGSC EEEECCCCCCCCEEEEEEEEEEECCCCCCHHHHCCCCCCHHHHCCCCEECCCCCCCCCEE FPFNNKIALRDLILRTKIAAAWLAALVPFASLASTSIQIDARQNCLATVFGKVSNGASAT ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCEE FQLAPGRYVVSIASNNMSCSGGSLTNGCLIDTVMLQGGNGNSHWGVAINRPTVVDVPSTS EEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCEEEECCCCC GLFAYVSDDVCSDNTGQATLLIQTAY CEEEEEECCCCCCCCCCEEEEEEECC >Mature Secondary Structure SRVSRARRSVPLIGSGRTGSIDRRIRRRPAARGAHVSRERDADARRLFANACRSASRLL CHHHHHHHCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEE VCVTGDKINNGDLNLHTIQFAVDFPTLNKRRHRHDAFPEYTARRGYRAVFGQSRTSGGSC EEEECCCCCCCCEEEEEEEEEEECCCCCCHHHHCCCCCCHHHHCCCCEECCCCCCCCCEE FPFNNKIALRDLILRTKIAAAWLAALVPFASLASTSIQIDARQNCLATVFGKVSNGASAT ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCEE FQLAPGRYVVSIASNNMSCSGGSLTNGCLIDTVMLQGGNGNSHWGVAINRPTVVDVPSTS EEECCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCEEEECCCCC GLFAYVSDDVCSDNTGQATLLIQTAY CEEEEEECCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA