| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237814223
Identifier: 237814223
GI number: 237814223
Start: 3849753
End: 3850853
Strand: Reverse
Name: 237814223
Synonym: GBP346_A4018
Alternate gene names: NA
Gene position: 3850853-3849753 (Counterclockwise)
Preceding gene: 237814224
Following gene: 237814222
Centisome position: 93.96
GC content: 72.39
Gene sequence:
>1101_bases ATGACTTCCCGTATCGCCCCGACTCCGTTCGCCGCCCGGTTCGACTTGCGCCTGCCGCTCGTGCAGGCGCCGATGGTCGG CGCGACGACGCCCGCGCTCGTCGCAGCCGCCTCCAACGCCGGTGCGCTCGGCAGCCTCGGCGGCGCGTCGTTCGCGCCGG AGAAGCTTGCCGCCGAAATCGCCGCGGTGCGTGCCGCGACGCGCCGCGCGTTCGCCGTGAACCTGTTCGTGCTGCCCGAC GCGCAGCCGGACGACGCGGCCGTGCGTCGCGCGCTCGACGCGATCGATCCGCTGCGCGCGCGGTTCGGGTTGCCGCCCGG CGCGCCGCTGCCGCGCTACGCGCCGGATTTCCGCGCGCAACTCGATGCGCTCGTCGACGCGCGCGTGCCGGTCGCGAGCT TCACGTTCGGCGTGCTCGACAAGAAAGATGTCGTCCGGCTGCAGGCGGCGGGCACGTATGTGATCGGCACGGCAACGCAT GTTGCCGAGGGCCTCGCGTGGCAGGCGGCGGGCGCCGACGCGATCTGCGCGCAAGGCGCGGAAGCGGGCGGCCATCGCGG CACGTTCATCGGCTCGGCCGAAGACGCGCTCGTCGGCACGATCGCGCTCGTGCCGCAGCTCGTCGACGCGACGAATCTGC CGGTGCTCGCGGCGGGCGGCATCATGGACGGGCGTGGAATCGCCGCCGCGCTCGCGCTCGGCGCGCAAGCCGCGCAGCTC GGCACCGCGTTTCTCACGTGCGCGGAAAGCGCGATTCCCGCGTGCTGGAAAGCGCGTCTGCTCGCGAGCGACGATACGTC GACGTCCGTCACGCGCGCGATCACGGGCCGCCACGCGCGCGGCATCCGCAATGCGCTGATGACGCAACTGGCCGGACGGC CCGATTCGGTCGCGCCGTATCCGGTGCAAAACGCGCTGACGCAGGAGCTGCGGCAAACCGCCGCGCGAGCGGGCGACGCC GAGTACTTGTCGTTGTGGTCCGGGCAAGGCGCGCCGCTCGGCAAGCACCGCGATGGCGCGCAAACCACCGCGCAATTGAT CGACGCGCTCGACGCCGAATGGCGCGCTGCGCTTTCGCGCTCCGTTATTTCCCTGGTCTGA
Upstream 100 bases:
>100_bases TAGAGTCGGTTCGTCGAGCATTCGATTCGTCCCGTCTCGTGCATGAACGCGTGCCTGCCTGCACGCGTTCGCCGCACCTC ATCCATTCGAGGATCCCGCC
Downstream 100 bases:
>100_bases TGAATTGGCCGGCGCGACGTGAAAGCGCGCCGGCCGCATTGCCGACACGTTCTGCTCACCGAATTATTTTCGCCGGAAAG CGTTGATTAAAAACATGATT
Product: oxidoreductase, 2-nitropropane dioxygenase family
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEIAAVRAATRRAFAVNLFVLPD AQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQLDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATH VAEGLAWQAAGADAICAQGAEAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMTQLAGRPDSVAPYPVQNALTQELRQTAARAGDA EYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSRSVISLV
Sequences:
>Translated_366_residues MTSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEIAAVRAATRRAFAVNLFVLPD AQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQLDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATH VAEGLAWQAAGADAICAQGAEAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMTQLAGRPDSVAPYPVQNALTQELRQTAARAGDA EYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSRSVISLV >Mature_365_residues TSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEIAAVRAATRRAFAVNLFVLPDA QPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQLDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATHV AEGLAWQAAGADAICAQGAEAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQLG TAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMTQLAGRPDSVAPYPVQNALTQELRQTAARAGDAE YLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSRSVISLV
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=343, Percent_Identity=29.1545189504373, Blast_Score=104, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 37518; Mature: 37387
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEI CCCCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHH AAVRAATRRAFAVNLFVLPDAQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQ HHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATHVAEGLAWQAAGADAICAQGA HHHHHHCCCCHHHHHHHCCCCCHHEEEEECCCEEEECHHHHHHCCCEECCCCCHHHHCCC EAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMTQLAGRPDSVAPY HHHHHHHHHHHCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PVQNALTQELRQTAARAGDAEYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSR CHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SVISLV HHHHCC >Mature Secondary Structure TSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEI CCCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHH AAVRAATRRAFAVNLFVLPDAQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQ HHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATHVAEGLAWQAAGADAICAQGA HHHHHHCCCCHHHHHHHCCCCCHHEEEEECCCEEEECHHHHHHCCCEECCCCCHHHHCCC EAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMTQLAGRPDSVAPY HHHHHHHHHHHCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PVQNALTQELRQTAARAGDAEYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSR CHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SVISLV HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA