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The map label for this gene is ccsB [H]

Identifier: 237814112

GI number: 237814112

Start: 3749733

End: 3751910

Strand: Reverse

Name: ccsB [H]

Synonym: GBP346_A3898

Alternate gene names: 237814112

Gene position: 3751910-3749733 (Counterclockwise)

Preceding gene: 237814113

Following gene: 237814111

Centisome position: 91.54

GC content: 66.3

Gene sequence:

>2178_bases
ATGAGCGTTACCACGTCGGGGTTGCAGTCGAGAACGGGACCGTCCGCGGTCAGGCGCGCGGTCGAGCTGTTGAGCTCGAT
GCGATTTGCGATCGCGCTGCTCGTCGTCCTGTCGATCGCGAGCATCATCGGCACGGTTCTCACGCAGGACGATCCGTACC
CTAACTACGTCAATCAGTTCGGCCCGTTCTGGGCCGACATCTTCCGCTCGCTGAGCCTCTATACGGTCTACAGCGCGTGG
TGGTTCATGCTGATCCTGATCTTCCTCGTCGTGTCGATCTCGCTGTGCGTGATCCGCAACGCGCCGAAGATGCTCGCCGA
CGCGAAGAGCTGGAAGGACAAGGTCCGCGAAGGCAGCCTGCGCGCGTTTCATCACAAGGCGGAGTTCGCGGTCGCGGGCG
ATCGCGCGCGCGCGACGCAGACCGTCGCCGCGTTCGTCGCGAAGGCGGGCTATCGGCATGTCGTGCGCGAAGCGGGCGGC
GCGACGCTCGTCGCCGCGAAGCGCGGCGCGATGACGAAGTTCGGCTACATCGCCGCGCACCTCGCGATCGTCGTGATCTG
CGTGGGCGGTCTGCTCGACAGCAACCTGCCGATCAAATTCCAGATGTGGATGTTCGGCAAGAGCCCCGTCAACACGAGCG
CGACGATCAGCGAGATCGGAGCCGAGCACCGGCTGTCCGCGTCGAATCCGACGTTCCGCGGCTACGCGTGGGTGCCGGAG
GGCCAGTATGTATCGACGGCGATCCTCAATCAGCCGACGGGCTCGCTGATCCAGGATCTGCCGTTCTCGATCCAGCTCGA
GAAATTCATCGTCGACTATTACTCGACCGGCATGCCGAAGCTCTTCGCGAGCGACATCGTCGTCGTCGATCGCGAGACGG
GCAAGCGGATTCCGGCGCGCGTCGAGGTCAACAAGCCGTTCACGTACAAGGGCGTGTCGATCTATCAATCGAGTTTCCAG
GACGGCGGCTCGCTGATGGAAATGACCGCGTATCCGATGACGGGCGCGAGCGCCGCGACGTTCCCGTTCAAGGGCACGAT
CGGCAATTCGGTGCCGCTCGCGGCGGCGGGCGCCGACGGCGAGACCGTCGAGTTCTCCGATTTCCGTGCGATCAACGTCG
AGAACGTCACCGACGCGAACGGCAAGACCGACGCGCGCGGCGTCGCGGCGAACCGCTCGATCAAGGAACTCTTCGACGAG
CGGCTCGGCTCCGGCGCGAAGACGTCGAAGCCCGTCGAACTGCACAACATCGGGCCTTCGGTTCAGTACAAGGTGCGCGG
CAAGGACGGCCAGGCGCGCGAATTCAACAACTACATGCTGCCCGTCGACATGGGCGGCGAGCGCGTGTTCCTCGCGGGCG
TGCGCGCGAGCCCGAACGACCCGTTCCGCTATCTGCGGATTCCGGCCGACAGCCGCGACAGCGTCGGCGAATGGATGCGG
CTGCGCGCGGCGCTCGAAGATCCGGCCGTGCGCATCGAGGCGGCGCGCCGCTTCGCGCGGCATTCGCTCGGCACGGGCGA
TGCCGCGCTGCGCGACCGGCTCGAGGACAGCGCGCAGCGCGTCCTGACCCTGTTCGCCGGCGCGGACGGCAGCATCGGCC
GTGGCGCGGACGGCAATCCGATCGGCGGCTTCCAGTCGGTCGCGACGTTCATCGACCGCTCGGTGCCGAAGGATGAGAAG
GAGAAGGCCGCCGCCTTGCTGCTGCGGATGCTCGAGGGTTCGATGTGGGAGGTTTGGCAAATCGCGCGCGAACGCGCGGG
CGAGCCGCCCGTCCAGCAGGCGCAGGATACGGTGCGCTTCGTGCAGAACGCGATCAACGCGCTGTCGGACAGTTTCCTGT
ACGGCGCGCCGGTTTATCTGCAGCTCGATTCGTTCAAGCAGGTGCAGGCGTCGGTGTTCCAGCTGACGCGCGCGCCGGGC
AAGAATCTGGTGTATCTTGGCAGCCTGCTGCTCGTCGCCGGCATCTTCGCGATGTTCTACGTGCGCGAGCGACGCCTCTG
GTTCTGGCTCAAGGATACGGGCGCGGGCGTCAGCGTGCTGATGGCGATGTCCACCGCGCGCAAGACGTTCGACTTCGAAA
AGGAATTCGTGCAGACGCGCGACGCGGCCGGGGCCGCCCTCGGCGCGCCGGCCTTCCGCGCGCCCGACGGCGCCGGCACC
AAGGACTCGACTCGGTAA

Upstream 100 bases:

>100_bases
CGAGCCGGCCGCCCATGCGGCGGCCGCTAGAACAAGAAAAGGGTGGGGCGCCGTCGAAGTACGGCCGCCTTGCCCTTTTT
TGCTGTGAGTTGGAGTTTGA

Downstream 100 bases:

>100_bases
CATCATGGATCTGACCCAAGTTTCGTCTTCCCGCGCGCCGCGCGCTTCCGGCGCGGCCGCGCCGCTGCTCTTCGACGAGC
GGCCGTTCCTGCGGCGGCTG

Product: cytochrome c assembly family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 725; Mature: 724

Protein sequence:

>725_residues
MSVTTSGLQSRTGPSAVRRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRSLSLYTVYSAW
WFMLILIFLVVSISLCVIRNAPKMLADAKSWKDKVREGSLRAFHHKAEFAVAGDRARATQTVAAFVAKAGYRHVVREAGG
ATLVAAKRGAMTKFGYIAAHLAIVVICVGGLLDSNLPIKFQMWMFGKSPVNTSATISEIGAEHRLSASNPTFRGYAWVPE
GQYVSTAILNQPTGSLIQDLPFSIQLEKFIVDYYSTGMPKLFASDIVVVDRETGKRIPARVEVNKPFTYKGVSIYQSSFQ
DGGSLMEMTAYPMTGASAATFPFKGTIGNSVPLAAAGADGETVEFSDFRAINVENVTDANGKTDARGVAANRSIKELFDE
RLGSGAKTSKPVELHNIGPSVQYKVRGKDGQAREFNNYMLPVDMGGERVFLAGVRASPNDPFRYLRIPADSRDSVGEWMR
LRAALEDPAVRIEAARRFARHSLGTGDAALRDRLEDSAQRVLTLFAGADGSIGRGADGNPIGGFQSVATFIDRSVPKDEK
EKAAALLLRMLEGSMWEVWQIARERAGEPPVQQAQDTVRFVQNAINALSDSFLYGAPVYLQLDSFKQVQASVFQLTRAPG
KNLVYLGSLLLVAGIFAMFYVRERRLWFWLKDTGAGVSVLMAMSTARKTFDFEKEFVQTRDAAGAALGAPAFRAPDGAGT
KDSTR

Sequences:

>Translated_725_residues
MSVTTSGLQSRTGPSAVRRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRSLSLYTVYSAW
WFMLILIFLVVSISLCVIRNAPKMLADAKSWKDKVREGSLRAFHHKAEFAVAGDRARATQTVAAFVAKAGYRHVVREAGG
ATLVAAKRGAMTKFGYIAAHLAIVVICVGGLLDSNLPIKFQMWMFGKSPVNTSATISEIGAEHRLSASNPTFRGYAWVPE
GQYVSTAILNQPTGSLIQDLPFSIQLEKFIVDYYSTGMPKLFASDIVVVDRETGKRIPARVEVNKPFTYKGVSIYQSSFQ
DGGSLMEMTAYPMTGASAATFPFKGTIGNSVPLAAAGADGETVEFSDFRAINVENVTDANGKTDARGVAANRSIKELFDE
RLGSGAKTSKPVELHNIGPSVQYKVRGKDGQAREFNNYMLPVDMGGERVFLAGVRASPNDPFRYLRIPADSRDSVGEWMR
LRAALEDPAVRIEAARRFARHSLGTGDAALRDRLEDSAQRVLTLFAGADGSIGRGADGNPIGGFQSVATFIDRSVPKDEK
EKAAALLLRMLEGSMWEVWQIARERAGEPPVQQAQDTVRFVQNAINALSDSFLYGAPVYLQLDSFKQVQASVFQLTRAPG
KNLVYLGSLLLVAGIFAMFYVRERRLWFWLKDTGAGVSVLMAMSTARKTFDFEKEFVQTRDAAGAALGAPAFRAPDGAGT
KDSTR
>Mature_724_residues
SVTTSGLQSRTGPSAVRRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRSLSLYTVYSAWW
FMLILIFLVVSISLCVIRNAPKMLADAKSWKDKVREGSLRAFHHKAEFAVAGDRARATQTVAAFVAKAGYRHVVREAGGA
TLVAAKRGAMTKFGYIAAHLAIVVICVGGLLDSNLPIKFQMWMFGKSPVNTSATISEIGAEHRLSASNPTFRGYAWVPEG
QYVSTAILNQPTGSLIQDLPFSIQLEKFIVDYYSTGMPKLFASDIVVVDRETGKRIPARVEVNKPFTYKGVSIYQSSFQD
GGSLMEMTAYPMTGASAATFPFKGTIGNSVPLAAAGADGETVEFSDFRAINVENVTDANGKTDARGVAANRSIKELFDER
LGSGAKTSKPVELHNIGPSVQYKVRGKDGQAREFNNYMLPVDMGGERVFLAGVRASPNDPFRYLRIPADSRDSVGEWMRL
RAALEDPAVRIEAARRFARHSLGTGDAALRDRLEDSAQRVLTLFAGADGSIGRGADGNPIGGFQSVATFIDRSVPKDEKE
KAAALLLRMLEGSMWEVWQIARERAGEPPVQQAQDTVRFVQNAINALSDSFLYGAPVYLQLDSFKQVQASVFQLTRAPGK
NLVYLGSLLLVAGIFAMFYVRERRLWFWLKDTGAGVSVLMAMSTARKTFDFEKEFVQTRDAAGAALGAPAFRAPDGAGTK
DSTR

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 79066; Mature: 78935

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTTSGLQSRTGPSAVRRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQF
CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
GPFWADIFRSLSLYTVYSAWWFMLILIFLVVSISLCVIRNAPKMLADAKSWKDKVREGSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH
RAFHHKAEFAVAGDRARATQTVAAFVAKAGYRHVVREAGGATLVAAKRGAMTKFGYIAAH
HHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
LAIVVICVGGLLDSNLPIKFQMWMFGKSPVNTSATISEIGAEHRLSASNPTFRGYAWVPE
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHCHHHCCCCCCCCCCEEEECCC
GQYVSTAILNQPTGSLIQDLPFSIQLEKFIVDYYSTGMPKLFASDIVVVDRETGKRIPAR
CCEEHHHHHCCCCHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCE
VEVNKPFTYKGVSIYQSSFQDGGSLMEMTAYPMTGASAATFPFKGTIGNSVPLAAAGADG
EECCCCCEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCC
ETVEFSDFRAINVENVTDANGKTDARGVAANRSIKELFDERLGSGAKTSKPVELHNIGPS
CEEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCC
VQYKVRGKDGQAREFNNYMLPVDMGGERVFLAGVRASPNDPFRYLRIPADSRDSVGEWMR
EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHH
LRAALEDPAVRIEAARRFARHSLGTGDAALRDRLEDSAQRVLTLFAGADGSIGRGADGNP
HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IGGFQSVATFIDRSVPKDEKEKAAALLLRMLEGSMWEVWQIARERAGEPPVQQAQDTVRF
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHH
VQNAINALSDSFLYGAPVYLQLDSFKQVQASVFQLTRAPGKNLVYLGSLLLVAGIFAMFY
HHHHHHHHHCCHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VRERRLWFWLKDTGAGVSVLMAMSTARKTFDFEKEFVQTRDAAGAALGAPAFRAPDGAGT
HHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
KDSTR
CCCCC
>Mature Secondary Structure 
SVTTSGLQSRTGPSAVRRAVELLSSMRFAIALLVVLSIASIIGTVLTQDDPYPNYVNQF
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
GPFWADIFRSLSLYTVYSAWWFMLILIFLVVSISLCVIRNAPKMLADAKSWKDKVREGSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH
RAFHHKAEFAVAGDRARATQTVAAFVAKAGYRHVVREAGGATLVAAKRGAMTKFGYIAAH
HHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
LAIVVICVGGLLDSNLPIKFQMWMFGKSPVNTSATISEIGAEHRLSASNPTFRGYAWVPE
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHCHHHCCCCCCCCCCEEEECCC
GQYVSTAILNQPTGSLIQDLPFSIQLEKFIVDYYSTGMPKLFASDIVVVDRETGKRIPAR
CCEEHHHHHCCCCHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCE
VEVNKPFTYKGVSIYQSSFQDGGSLMEMTAYPMTGASAATFPFKGTIGNSVPLAAAGADG
EECCCCCEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCC
ETVEFSDFRAINVENVTDANGKTDARGVAANRSIKELFDERLGSGAKTSKPVELHNIGPS
CEEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCC
VQYKVRGKDGQAREFNNYMLPVDMGGERVFLAGVRASPNDPFRYLRIPADSRDSVGEWMR
EEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHH
LRAALEDPAVRIEAARRFARHSLGTGDAALRDRLEDSAQRVLTLFAGADGSIGRGADGNP
HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IGGFQSVATFIDRSVPKDEKEKAAALLLRMLEGSMWEVWQIARERAGEPPVQQAQDTVRF
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHH
VQNAINALSDSFLYGAPVYLQLDSFKQVQASVFQLTRAPGKNLVYLGSLLLVAGIFAMFY
HHHHHHHHHCCHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VRERRLWFWLKDTGAGVSVLMAMSTARKTFDFEKEFVQTRDAAGAALGAPAFRAPDGAGT
HHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
KDSTR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA