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The map label for this gene is cycA [H]

Identifier: 237814113

GI number: 237814113

Start: 3752041

End: 3752625

Strand: Reverse

Name: cycA [H]

Synonym: GBP346_A3899

Alternate gene names: 237814113

Gene position: 3752625-3752041 (Counterclockwise)

Preceding gene: 237814116

Following gene: 237814112

Centisome position: 91.56

GC content: 67.18

Gene sequence:

>585_bases
ATGGCGGAGGCAAGGGCGGCGGATGCGGCGAAGCCGGATCTCGACCGAGGCAAGGCAATCGCGACGCAGGTATGCGCGGC
ATGCCACGGCGTCGACGGCAACAGCGCGACGGGTTCGTTCCCGAAGCTCGCCGGTCAGCATCCCGATTATCTCGTCAAGC
AATTGCACGATTTCAAGACGCAGCCGGGCGCGAAGGGGCCGGTGCGCGTCAATTCCGTGATGGTCGGATTCGCAAGCGCG
CTGAACGATCAGGACGCGCGCAACGTCGCCGCCTATTACGGATCGCAGTCGGCCAAGCCGGGCGCCGCGCGCAACGCGGC
CACCGTGCCCGTCGGGCAGAAGATCTATCGCGGCGGCATCGCCGAGAAGGGCGTGCCCGCCTGCGCGAGCTGCCACGGGC
CGACTGGGCAGGGGATTCCGGTCCAGTACCCGCGGTTGTCGGGGCAATGGGCCGACTATACCGTCGCGCAGTTGACCGCG
TTCCAGCAAGGCACGCGCAGCAACGACGCGATGCATCAGATCGCGTTGCGGCTGACGGACAGCGAGGTCAAGGCCGTCGC
CGATTACATCGCCGGCCTGCATTGA

Upstream 100 bases:

>100_bases
ACCTCACTACTCCCACAAGACGAAACAAGGTGTGCGAATGAATCGACTGAGCAAGTCTTTGGTGGTGCTTCAGTTCGCGG
TAGCAGGGCTCGCAGGTTTC

Downstream 100 bases:

>100_bases
CCCGGGTTTCCGGTTCGCGAGCCGAATGAACGAGCCGGCCGCCCATGCGGCGGCCGCTAGAACAAGAAAAGGGTGGGGCG
CCGTCGAAGTACGGCCGCCT

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MAEARAADAAKPDLDRGKAIATQVCAACHGVDGNSATGSFPKLAGQHPDYLVKQLHDFKTQPGAKGPVRVNSVMVGFASA
LNDQDARNVAAYYGSQSAKPGAARNAATVPVGQKIYRGGIAEKGVPACASCHGPTGQGIPVQYPRLSGQWADYTVAQLTA
FQQGTRSNDAMHQIALRLTDSEVKAVADYIAGLH

Sequences:

>Translated_194_residues
MAEARAADAAKPDLDRGKAIATQVCAACHGVDGNSATGSFPKLAGQHPDYLVKQLHDFKTQPGAKGPVRVNSVMVGFASA
LNDQDARNVAAYYGSQSAKPGAARNAATVPVGQKIYRGGIAEKGVPACASCHGPTGQGIPVQYPRLSGQWADYTVAQLTA
FQQGTRSNDAMHQIALRLTDSEVKAVADYIAGLH
>Mature_193_residues
AEARAADAAKPDLDRGKAIATQVCAACHGVDGNSATGSFPKLAGQHPDYLVKQLHDFKTQPGAKGPVRVNSVMVGFASAL
NDQDARNVAAYYGSQSAKPGAARNAATVPVGQKIYRGGIAEKGVPACASCHGPTGQGIPVQYPRLSGQWADYTVAQLTAF
QQGTRSNDAMHQIALRLTDSEVKAVADYIAGLH

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 20203; Mature: 20072

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEARAADAAKPDLDRGKAIATQVCAACHGVDGNSATGSFPKLAGQHPDYLVKQLHDFKT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCC
QPGAKGPVRVNSVMVGFASALNDQDARNVAAYYGSQSAKPGAARNAATVPVGQKIYRGGI
CCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCC
AEKGVPACASCHGPTGQGIPVQYPRLSGQWADYTVAQLTAFQQGTRSNDAMHQIALRLTD
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCH
SEVKAVADYIAGLH
HHHHHHHHHHHCCC
>Mature Secondary Structure 
AEARAADAAKPDLDRGKAIATQVCAACHGVDGNSATGSFPKLAGQHPDYLVKQLHDFKT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCC
QPGAKGPVRVNSVMVGFASALNDQDARNVAAYYGSQSAKPGAARNAATVPVGQKIYRGGI
CCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCC
AEKGVPACASCHGPTGQGIPVQYPRLSGQWADYTVAQLTAFQQGTRSNDAMHQIALRLTD
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCH
SEVKAVADYIAGLH
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7619830; 6089759 [H]