| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is thiE [H]
Identifier: 237814078
GI number: 237814078
Start: 3712580
End: 3713683
Strand: Reverse
Name: thiE [H]
Synonym: GBP346_A3863
Alternate gene names: 237814078
Gene position: 3713683-3712580 (Counterclockwise)
Preceding gene: 237814079
Following gene: 237814077
Centisome position: 90.61
GC content: 75.09
Gene sequence:
>1104_bases ATGAGCGCCGCGTTGCCCGACGCGTTCTGGCCGCCCGCCGACGAGCTTACCGAGGCCGCCGAGCGGATTCGCGCGACGCT CGGTGCGTGGCCGCGGCCGGCCGTGCGCACGCGGATCTGTCTCGCGCCGCCGGAGCAGCCGCGCGCGGCCGACCTGTGGG TCGCCATCGCGGGCGACGCCGGCGCGCACGCCGCGCACATCGCGCGGCTGAACGCGGCGGGCGCGCAGGCGATCGTCATC GACGATGCATCGGCGACGCTCCACACGGGCGCGGCGCGCCATGCGCTCGCGTCGCGCGCGCCGCTCGCCGACGACTGGAT CGCGGCGCTCGCGGCGTTTCTCGATTGCGGCTTCGCCGCGTCCGACGCGCTCGTGCTCGCGCTCGCATGGCGCGACGGCG ACGAGGCGCGCGGCGGCGATCCGTGGCCCGTCGATCCGGCACGCTTTCCGCGCGTGCTCGGCCTGCCCGCCGCGCCCGAA CCGGCGTTCGCGCCGTGCCCGCAGCGGCTCGGCCTGTATCCGGTGCTGCCGAGCGCCGAATGGGTCGAGCGCGTGCTCGA TTGCGGCGTGCGGACCGTGCAACTGCGCGTGAAGGACGCCTCGCCCGACGCGCTGCGCGCGGAGGTCGAGCGGGCCGTTG CCGCGGGCCGCCGCCATCCGGACGCGCGCGTGTTCATCAACGATCACTGGCGGCTCGCGCTCGACGCGGGCGCATACGGC GTGCACCTCGGCCAGGAGGATCTGGAGACCGCCGATCTCGGCGCGATCGCGCGGGCGGGCGCGCGGCTCGGCCTGTCGAG CCACGGGTATTACGAAATGCTCGTCGCGCTGCAGTTCAAGCCGAGCTATCTCGCGCTCGGCCCGGTGTTCGCGACCGCGA CGAAGGCGGTTGCCGCGCCGCCGCAAGGCCTCGCGCGGCTTGCGCGCTACGTGCGCTTCGCCGGGCCGCAGGCGCCGCTC GTCGCGATCGGCGGAATCGCGCCCGACACGCTCGGCGCGGTGCTGGCGGCGGGCGTCGGCAGCGCGGCCGTCGTCAGCGC GATCACGGCGGCGGCCGATTACCGGGAAGCGATTGTTGCGTTGCAGCAAAACTTCGGACGATAA
Upstream 100 bases:
>100_bases GCGCCGCGTATCTCGCGGGGCCGATGGATGCGCGCGAGAGCGCGCACGCGAGCACGCCCGTCGTCGGCATGCCGTTCTGG CACCAGGACGGGAGCCACGC
Downstream 100 bases:
>100_bases TTTGACAATCTCTGACTGGAGCGCCTGAGCGGCCTTTGCGGCATCATTCCGATGCAGGCCCTATAATTCGGCGTTCTGCG TATAAGGATTGTCCGCTCCG
Product: thiamine-phosphate diphosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSAALPDAFWPPADELTEAAERIRATLGAWPRPAVRTRICLAPPEQPRAADLWVAIAGDAGAHAAHIARLNAAGAQAIVI DDASATLHTGAARHALASRAPLADDWIAALAAFLDCGFAASDALVLALAWRDGDEARGGDPWPVDPARFPRVLGLPAAPE PAFAPCPQRLGLYPVLPSAEWVERVLDCGVRTVQLRVKDASPDALRAEVERAVAAGRRHPDARVFINDHWRLALDAGAYG VHLGQEDLETADLGAIARAGARLGLSSHGYYEMLVALQFKPSYLALGPVFATATKAVAAPPQGLARLARYVRFAGPQAPL VAIGGIAPDTLGAVLAAGVGSAAVVSAITAAADYREAIVALQQNFGR
Sequences:
>Translated_367_residues MSAALPDAFWPPADELTEAAERIRATLGAWPRPAVRTRICLAPPEQPRAADLWVAIAGDAGAHAAHIARLNAAGAQAIVI DDASATLHTGAARHALASRAPLADDWIAALAAFLDCGFAASDALVLALAWRDGDEARGGDPWPVDPARFPRVLGLPAAPE PAFAPCPQRLGLYPVLPSAEWVERVLDCGVRTVQLRVKDASPDALRAEVERAVAAGRRHPDARVFINDHWRLALDAGAYG VHLGQEDLETADLGAIARAGARLGLSSHGYYEMLVALQFKPSYLALGPVFATATKAVAAPPQGLARLARYVRFAGPQAPL VAIGGIAPDTLGAVLAAGVGSAAVVSAITAAADYREAIVALQQNFGR >Mature_366_residues SAALPDAFWPPADELTEAAERIRATLGAWPRPAVRTRICLAPPEQPRAADLWVAIAGDAGAHAAHIARLNAAGAQAIVID DASATLHTGAARHALASRAPLADDWIAALAAFLDCGFAASDALVLALAWRDGDEARGGDPWPVDPARFPRVLGLPAAPEP AFAPCPQRLGLYPVLPSAEWVERVLDCGVRTVQLRVKDASPDALRAEVERAVAAGRRHPDARVFINDHWRLALDAGAYGV HLGQEDLETADLGAIARAGARLGLSSHGYYEMLVALQFKPSYLALGPVFATATKAVAAPPQGLARLARYVRFAGPQAPLV AIGGIAPDTLGAVLAAGVGSAAVVSAITAAADYREAIVALQQNFGR
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=208, Percent_Identity=56.25, Blast_Score=206, Evalue=3e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 38273; Mature: 38142
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAALPDAFWPPADELTEAAERIRATLGAWPRPAVRTRICLAPPEQPRAADLWVAIAGDA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCEEEEEEECCC GAHAAHIARLNAAGAQAIVIDDASATLHTGAARHALASRAPLADDWIAALAAFLDCGFAA CCHHHHHHHHCCCCCEEEEEECCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC SDALVLALAWRDGDEARGGDPWPVDPARFPRVLGLPAAPEPAFAPCPQRLGLYPVLPSAE CCEEEEEEEECCCCCCCCCCCCCCCHHHCCCEECCCCCCCCCCCCCHHHCCCEECCCCHH WVERVLDCGVRTVQLRVKDASPDALRAEVERAVAAGRRHPDARVFINDHWRLALDAGAYG HHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCE VHLGQEDLETADLGAIARAGARLGLSSHGYYEMLVALQFKPSYLALGPVFATATKAVAAP EECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEHHHHHHHHHHHHCCC PQGLARLARYVRFAGPQAPLVAIGGIAPDTLGAVLAAGVGSAAVVSAITAAADYREAIVA HHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LQQNFGR HHHHCCC >Mature Secondary Structure SAALPDAFWPPADELTEAAERIRATLGAWPRPAVRTRICLAPPEQPRAADLWVAIAGDA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCCCEEEEEEECCC GAHAAHIARLNAAGAQAIVIDDASATLHTGAARHALASRAPLADDWIAALAAFLDCGFAA CCHHHHHHHHCCCCCEEEEEECCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC SDALVLALAWRDGDEARGGDPWPVDPARFPRVLGLPAAPEPAFAPCPQRLGLYPVLPSAE CCEEEEEEEECCCCCCCCCCCCCCCHHHCCCEECCCCCCCCCCCCCHHHCCCEECCCCHH WVERVLDCGVRTVQLRVKDASPDALRAEVERAVAAGRRHPDARVFINDHWRLALDAGAYG HHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCCCE VHLGQEDLETADLGAIARAGARLGLSSHGYYEMLVALQFKPSYLALGPVFATATKAVAAP EECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCEEEHHHHHHHHHHHHCCC PQGLARLARYVRFAGPQAPLVAIGGIAPDTLGAVLAAGVGSAAVVSAITAAADYREAIVA HHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LQQNFGR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA